Rmu_sc0000676.1_g000021

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000676.1
OG0000039
Physical Location & Seq
Reverse (-)
61718 .. 65426
3709 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000676.1_g000021.1.cds

Sequence Viewer

Length: 1824 bp
atggaaaccggaaaagaaagaagcaagcagggtggctctctccagttcaggtgttatcaaatgaagaagaagggtcttctcgagtggttggctcgatcgctccgtcagttttacatgtgccttttacagtcaatggcctccaacttggagcttgctgggtcggtcaaagtcaatggattcccaattggaaactcggagcctcacattgaacatgtccccctttacaagctttttattcggtttgatcaccaatacagaggatcaagaatggcggacctcgctgcaggtggtgctatgggagtgccgtttactatactgtatgaagtgattaaggaagtggtgatcaagacttcgatgtttagacctctccttgaggagctgaagtcaaagatagaagctttgaatccactgattgctcagatggacagccggaataaggtgttggatcgtccagaggcggaacttagagaatttaaagtacaaatggagaagggccctgagcttattaccaagtgcgccaatcttagcaagtggaaaagctacaaaaagtataaatacagcaaccaacttcttgaattgcagagctctcttcagaatctgctgtttatactgcaatggcaacaagcaagggatgtgaaggagaccttggttggagtaaagaatgtagagacggtggtgcagcgagtggatgtgagtgttgcggaattcaaagaagaagggatgactgttatgaaggagaccttggatgaggtaagaaatatagggacggtggtccggcggattgataagaaaggtgaggtacagagccgaatagattgtgacgtacctgaacctccattggttacagttggattgtatgtgcctttgagggaattgaagatgaagcttcttaagaatgataatgtatcaatgcttgtgctaactgctcctggaggctgcgggaaaaccacattggccacaaagttttgtcaagatgaggaagtcaaaggtatattcaagaacaatatcttcttcgtcactgttacaaagaagtcaaccttcaaccttattgtacaaggactacatcaacgcaagagtaccgacatacctatgttccaagatgaagcaactgctgttaagtggctgcgtaaatttctaatggaagaaggacataaccctgtactgttggtcctggatgatgtttggtctgaatcaaaatatattcttgaaaaatttgatgaagtgaaaatgccaaatttcaagattctggtgacatcaagatcacagtttccagaatatggctcggtttatcatctaaagtcattgaatgatagagatgcaatgactcttttctgccattcagcatccctgggagatggtcaatggaataatcttgctagagagatagtagcaccttgtaagggatatccacttgcaattaaagtggttggaaaatcacttcgcggaaaaccgattgagttctggcgtaaaagagcattggcatggtctaaaggtgattctattattgattctgagactgaagtgcttcttcgccttcaaaccagcttagatgctttggatgaaaaagaagctttcatcaaagaatgttttttagaccttggttcatttccccaagaccaaagaattccagcagctgctctgattgatatgtgggcagagttatatgaaggtctcgataaagattttctggccattacaaacgtgtatgagcttaccacccgaagtttggctgatcttgtggtcacaaggaaggagacagtggaggatgatgactactacagtgaacactttgtcacccaacatgatttgctcagacagctttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

607

Amino Acids

69.49

Weight (kDa)

7.53

Isoelectric Point (pI)

40.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 275
Acc36I ACCTGC 1 cut(s) 275
AccB7I CCANNNNNTGG 1 cut(s) 1277
AccII CGCG 1 cut(s) 1443
AciI CCGC 6 cut(s) 272, 458, 701, 778, 939, 1443
AclWI GGATC 2 cut(s) 268, 453
AcoI YGGCCR 2 cut(s) 954, 1689
AcsI RAATTY 6 cut(s) 470, 704, 1130, 1211, 1234, 1623
AcuI CTGAAG 3 cut(s) 401, 575, 1539
AfaI GTAC 6 cut(s) 480, 801, 825, 1053, 1078, 1161
AfiI CCNNNNNNNGG 4 cut(s) 436, 1277, 1400, 1726
AflII CTTAAG 1 cut(s) 890
AflIII ACRYGT 3 cut(s) 114, 211, 1701
AjnI CCWGG 3 cut(s) 928, 1170, 1347
AjuI GAANNNNNNNTTGG 8 cut(s) 425, 457, 629, 661, 725, 757, 935, 967
Alw21I GWGCWC 1 cut(s) 587
Alw26I GTCTC 6 cut(s) 635, 662, 731, 1508, 1676, 1748
AlwI GGATC 2 cut(s) 268, 453
AlwNI CAGNNNCTG 2 cut(s) 598, 1634
Ama87I CYCGRG 1 cut(s) 80
AoxI GGCC 4 cut(s) 135, 493, 954, 1689
ApaI GGGCCC 1 cut(s) 497
ApeKI GCWGC 6 cut(s) 281, 679, 936, 1123, 1631, 1634
ApoI RAATTY 6 cut(s) 470, 704, 1130, 1211, 1234, 1623
Asp700I GAANNNNTTC 1 cut(s) 1524
AspLEI GCGC 1 cut(s) 518
AspS9I GGNCC 5 cut(s) 274, 493, 494, 772, 1168
AsuHPI GGTGA 6 cut(s) 239, 352, 806, 1261, 1505, 1786
AvaI CYCGRG 1 cut(s) 80
AvaII GGWCC 3 cut(s) 274, 772, 1168
BaeGI GKGCMC 1 cut(s) 497
BalI TGGCCA 2 cut(s) 956, 1691
BanII GRGCYC 2 cut(s) 497, 587
BbsI GAAGAC 1 cut(s) 68
Bbv12I GWGCWC 1 cut(s) 587
BbvI GCAGC 6 cut(s) 268, 691, 923, 1110, 1621, 1643
BccI CCATC 2 cut(s) 415, 1349
BceAI ACGGC 1 cut(s) 289
BciT130I CCWGG 3 cut(s) 930, 1172, 1349
BclI TGATCA 2 cut(s) 244, 342
BcoDI GTCTC 6 cut(s) 635, 662, 731, 1508, 1676, 1748
BfaI CTAG 1 cut(s) 1377
BfmI CTRYAG 2 cut(s) 282, 1777
BfrI CTTAAG 1 cut(s) 890
BfuAI ACCTGC 1 cut(s) 275
BisI GCNGC 6 cut(s) 282, 680, 937, 1124, 1632, 1635
BlsI GCNGC 6 cut(s) 283, 681, 938, 1125, 1633, 1636
Bme1390I CCNGG 3 cut(s) 930, 1172, 1349
Bme18I GGWCC 3 cut(s) 274, 772, 1168
BmeT110I CYCGRG 1 cut(s) 80
BmgT120I GGNCC 5 cut(s) 274, 493, 494, 772, 1168
BmiI GGNNCC 2 cut(s) 198, 495
BmrFI CCNGG 3 cut(s) 930, 1172, 1349
BmsI GCATC 3 cut(s) 1306, 1352, 1540
BoxI GACNNNNGTC 1 cut(s) 770
BpiI GAAGAC 1 cut(s) 68
BpmI CTGGAG 2 cut(s) 26, 951
Bpu10I CCTNAGC 1 cut(s) 498
BpuEI CTTGAG 1 cut(s) 392
BsaI GGTCTC 3 cut(s) 635, 731, 1676
BsaJI CCNNGG 5 cut(s) 645, 741, 1347, 1348, 1597
BsaWI WCCGGW 1 cut(s) 8
BsaXI ACNNNNNCTCC 2 cut(s) 368, 398
Bsc4I CCNNNNNNNGG 4 cut(s) 436, 1277, 1400, 1726
Bse1I ACTGG 1 cut(s) 43
Bse3DI GCAATG 2 cut(s) 620, 1326
BseBI CCWGG 3 cut(s) 930, 1172, 1349
BseDI CCNNGG 5 cut(s) 645, 741, 1347, 1348, 1597
BseGI GGATG 8 cut(s) 637, 694, 726, 751, 1180, 1343, 1564, 1771
BseLI CCNNNNNNNGG 4 cut(s) 436, 1277, 1400, 1726
BseMI GCAATG 2 cut(s) 620, 1326
BseMII CTCAG 3 cut(s) 431, 489, 1503
BseNI ACTGG 1 cut(s) 43
BseRI GAGGAG 1 cut(s) 389
BseSI GKGCMC 1 cut(s) 497
BseXI GCAGC 6 cut(s) 268, 691, 923, 1110, 1621, 1643
BseYI CCCAGC 1 cut(s) 155
BsgI GTGCAG 1 cut(s) 698
Bsh1236I CGCG 1 cut(s) 1443
Bsh1285I CGRYCG 1 cut(s) 98
BshFI GGCC 4 cut(s) 137, 495, 956, 1691
BsiEI CGRYCG 1 cut(s) 98
BsiHKAI GWGCWC 1 cut(s) 587
BsiHKCI CYCGRG 1 cut(s) 80
BsiSI CCGG 3 cut(s) 9, 430, 775
BslFI GGGAC 2 cut(s) 200, 778
BslI CCNNNNNNNGG 4 cut(s) 436, 1277, 1400, 1726
BsmAI GTCTC 6 cut(s) 635, 662, 731, 1508, 1676, 1748
BsmBI CGTCTC 1 cut(s) 662
BsmFI GGGAC 2 cut(s) 200, 778
BsnI GGCC 4 cut(s) 137, 495, 956, 1691
Bso31I GGTCTC 3 cut(s) 635, 731, 1676
BsoBI CYCGRG 1 cut(s) 80
Bsp120I GGGCCC 1 cut(s) 493
Bsp1286I GDGCHC 2 cut(s) 497, 587
Bsp1407I TGTACA 1 cut(s) 1051
Bsp143I GATC 7 cut(s) 95, 244, 260, 342, 445, 1259, 1732
BspACI CCGC 6 cut(s) 272, 458, 701, 778, 939, 1443
BspANI GGCC 4 cut(s) 137, 495, 956, 1691
BspCNI CTCAG 4 cut(s) 430, 490, 1504, 1824
BspFNI CGCG 1 cut(s) 1443
BspLI GGNNCC 2 cut(s) 198, 495
BspMAI CTGCAG 1 cut(s) 286
BspMI ACCTGC 1 cut(s) 275
BspPI GGATC 2 cut(s) 268, 453
BspTI CTTAAG 1 cut(s) 890
BspTNI GGTCTC 3 cut(s) 635, 731, 1676
BsrDI GCAATG 2 cut(s) 620, 1326
BsrGI TGTACA 1 cut(s) 1051
BsrI ACTGG 1 cut(s) 43
BssECI CCNNGG 5 cut(s) 645, 741, 1347, 1348, 1597
BssMI GATC 7 cut(s) 95, 244, 260, 342, 445, 1259, 1732
BssT1I CCWWGG 3 cut(s) 645, 741, 1597
Bst2UI CCWGG 3 cut(s) 930, 1172, 1349
Bst6I CTCTTC 1 cut(s) 594
BstAFI CTTAAG 1 cut(s) 890
BstAPI GCANNNNNTGC 1 cut(s) 290
BstAUI TGTACA 1 cut(s) 1051
BstC8I GCNNGC 2 cut(s) 26, 153
BstDEI CTNAG 7 cut(s) 417, 464, 498, 524, 1512, 1546, 1811
BstF5I GGATG 8 cut(s) 637, 694, 726, 751, 1180, 1343, 1564, 1771
BstFNI CGCG 1 cut(s) 1443
BstHHI GCGC 1 cut(s) 518
BstKTI GATC 7 cut(s) 98, 247, 263, 345, 448, 1262, 1735
BstMAI GTCTC 6 cut(s) 635, 662, 731, 1508, 1676, 1748
BstMBI GATC 7 cut(s) 95, 244, 260, 342, 445, 1259, 1732
BstMCI CGRYCG 1 cut(s) 98
BstMWI GCNNNNNNNGC 3 cut(s) 278, 290, 1816
BstNI CCWGG 3 cut(s) 930, 1172, 1349
BstNSI RCATGY 2 cut(s) 118, 215
BstPAI GACNNNNGTC 1 cut(s) 770
BstSCI CCNGG 3 cut(s) 928, 1170, 1347
BstSFI CTRYAG 2 cut(s) 282, 1777
BstSLI GKGCMC 1 cut(s) 497
BstUI CGCG 1 cut(s) 1443
BstV1I GCAGC 6 cut(s) 268, 691, 923, 1110, 1621, 1643
BstV2I GAAGAC 1 cut(s) 68
BsuRI GGCC 4 cut(s) 137, 495, 956, 1691
BtsCI GGATG 8 cut(s) 637, 694, 726, 751, 1180, 1343, 1564, 1771
BtsIMutI CAGTG 4 cut(s) 407, 1017, 1764, 1786
BveI ACCTGC 1 cut(s) 275
Cac8I GCNNGC 2 cut(s) 26, 153
CaiI CAGNNNCTG 2 cut(s) 598, 1634
CfoI GCGC 1 cut(s) 518
Cfr13I GGNCC 5 cut(s) 274, 493, 494, 772, 1168
Csp6I GTAC 6 cut(s) 479, 800, 824, 1052, 1077, 1160
CspCI CAANNNNNGTGG 4 cut(s) 13, 48, 1404, 1439
CviAII CATG 4 cut(s) 115, 212, 1482, 1802
CviQI GTAC 6 cut(s) 479, 800, 824, 1052, 1077, 1160
DdeI CTNAG 7 cut(s) 417, 464, 498, 524, 1512, 1546, 1811
DpnI GATC 7 cut(s) 97, 246, 262, 344, 447, 1261, 1734
DpnII GATC 7 cut(s) 95, 244, 260, 342, 445, 1259, 1732
DraI TTTAAA 1 cut(s) 475
EaeI YGGCCR 2 cut(s) 954, 1689
Eam1104I CTCTTC 1 cut(s) 594
EarI CTCTTC 1 cut(s) 594
EciI GGCGGA 3 cut(s) 287, 473, 793
Ecl136II GAGCTC 1 cut(s) 585
Eco130I CCWWGG 3 cut(s) 645, 741, 1597
Eco24I GRGCYC 2 cut(s) 497, 587
Eco31I GGTCTC 3 cut(s) 635, 731, 1676
Eco32I GATATC 1 cut(s) 1406
Eco47I GGWCC 3 cut(s) 274, 772, 1168
Eco53kI GAGCTC 1 cut(s) 585
Eco57I CTGAAG 3 cut(s) 401, 575, 1539
Eco88I CYCGRG 1 cut(s) 80
EcoICRI GAGCTC 1 cut(s) 585
EcoO109I RGGNCCY 2 cut(s) 493, 494
EcoRI GAATTC 2 cut(s) 704, 1623
EcoRII CCWGG 3 cut(s) 928, 1170, 1347
EcoRV GATATC 1 cut(s) 1406
EcoT14I CCWWGG 3 cut(s) 645, 741, 1597
EcoT38I GRGCYC 2 cut(s) 497, 587
ErhI CCWWGG 3 cut(s) 645, 741, 1597
Esp3I CGTCTC 1 cut(s) 662
FaeI CATG 4 cut(s) 118, 215, 1485, 1805
FalI AAGNNNNNCTT 8 cut(s) 629, 661, 725, 757, 1022, 1054, 1512, 1544
FaqI GGGAC 2 cut(s) 200, 778
FatI CATG 4 cut(s) 114, 211, 1481, 1801
FauI CCCGC 1 cut(s) 932
FbaI TGATCA 2 cut(s) 244, 342
Fnu4HI GCNGC 6 cut(s) 282, 680, 937, 1124, 1632, 1635
FokI GGATG 8 cut(s) 644, 701, 733, 758, 1187, 1330, 1571, 1778
FriOI GRGCYC 2 cut(s) 497, 587
Fsp4HI GCNGC 6 cut(s) 282, 680, 937, 1124, 1632, 1635
FspBI CTAG 1 cut(s) 1377
GlaI GCGC 1 cut(s) 517
GluI GCNGC 6 cut(s) 282, 680, 937, 1124, 1632, 1635
GsaI CCCAGC 1 cut(s) 159
GsuI CTGGAG 2 cut(s) 26, 951
HaeIII GGCC 4 cut(s) 137, 495, 956, 1691
HapII CCGG 3 cut(s) 9, 430, 775
HhaI GCGC 1 cut(s) 518
Hin1II CATG 4 cut(s) 118, 215, 1485, 1805
Hin6I GCGC 1 cut(s) 516
HinP1I GCGC 1 cut(s) 516
HincII GTYRAC 1 cut(s) 1035
HindII GTYRAC 1 cut(s) 1035
HindIII AAGCTT 4 cut(s) 227, 396, 884, 1569
HinfI GANTC 8 cut(s) 177, 403, 595, 1190, 1243, 1324, 1496, 1508
HpaII CCGG 3 cut(s) 9, 430, 775
HphI GGTGA 6 cut(s) 239, 352, 806, 1261, 1505, 1786
Hpy166II GTNNAC 3 cut(s) 309, 1035, 1784
Hpy188I TCNGA 7 cut(s) 196, 420, 594, 1189, 1513, 1641, 1814
Hpy8I GTNNAC 3 cut(s) 309, 1035, 1784
HpyCH4IV ACGT 2 cut(s) 822, 1701
HpyCH4V TGCA 6 cut(s) 284, 580, 613, 679, 1319, 1415
HpyF10VI GCNNNNNNNGC 3 cut(s) 278, 290, 1816
HpyF3I CTNAG 7 cut(s) 417, 464, 498, 524, 1512, 1546, 1811
HpySE526I ACGT 2 cut(s) 822, 1701
Hsp92II CATG 4 cut(s) 118, 215, 1485, 1805
HspAI GCGC 1 cut(s) 516
Ksp22I TGATCA 2 cut(s) 244, 342
Kzo9I GATC 7 cut(s) 95, 244, 260, 342, 445, 1259, 1732
LmnI GCTCC 5 cut(s) 105, 148, 196, 376, 931
Lsp1109I GCAGC 6 cut(s) 268, 691, 923, 1110, 1621, 1643
LweI GCATC 3 cut(s) 1306, 1352, 1540
MaeI CTAG 1 cut(s) 1377
MaeII ACGT 2 cut(s) 822, 1701
MaeIII GTNAC 7 cut(s) 818, 841, 1015, 1021, 1249, 1741, 1792
MalI GATC 7 cut(s) 97, 246, 262, 344, 447, 1261, 1734
MboI GATC 7 cut(s) 95, 244, 260, 342, 445, 1259, 1732
MfeI CAATTG 1 cut(s) 183
MhlI GDGCHC 2 cut(s) 497, 587
MlsI TGGCCA 2 cut(s) 956, 1691
MluNI TGGCCA 2 cut(s) 956, 1691
MlyI GAGTC 1 cut(s) 1318
MmeI TCCRAC 5 cut(s) 165, 423, 631, 829, 1408
Mox20I TGGCCA 2 cut(s) 956, 1691
MroXI GAANNNNTTC 1 cut(s) 1524
MscI TGGCCA 2 cut(s) 956, 1691
MseI TTAA 5 cut(s) 330, 474, 891, 1116, 1419
MslI CAYNNNNRTG 2 cut(s) 1088, 1480
Msp20I TGGCCA 2 cut(s) 956, 1691
MspA1I CMGCKG 1 cut(s) 1634
MspCI CTTAAG 1 cut(s) 890
MspI CCGG 3 cut(s) 9, 430, 775
MspR9I CCNGG 3 cut(s) 930, 1172, 1349
MunI CAATTG 1 cut(s) 183
MvaI CCWGG 3 cut(s) 930, 1172, 1349
MvnI CGCG 1 cut(s) 1443
MwoI GCNNNNNNNGC 3 cut(s) 278, 290, 1816
NdeII GATC 7 cut(s) 95, 244, 260, 342, 445, 1259, 1732
NlaIII CATG 4 cut(s) 118, 215, 1485, 1805
NlaIV GGNNCC 2 cut(s) 198, 495
NmuCI GTSAC 5 cut(s) 818, 1015, 1249, 1741, 1792
NspI RCATGY 2 cut(s) 118, 215
PaeR7I CTCGAG 1 cut(s) 80
PaqCI CACCTGC 1 cut(s) 275
PasI CCCWGGG 1 cut(s) 1348
PciI ACATGT 2 cut(s) 114, 211
PcsI WCGNNNNNNNCGW 1 cut(s) 100
PdmI GAANNNNTTC 1 cut(s) 1524
PfeI GAWTC 7 cut(s) 177, 403, 595, 1190, 1243, 1496, 1508
PflMI CCANNNNNTGG 1 cut(s) 1277
PfoI TCCNGGA 2 cut(s) 928, 1170
PkrI GCNGC 6 cut(s) 283, 681, 938, 1125, 1633, 1636
Ple19I CGATCG 1 cut(s) 98
PleI GAGTC 1 cut(s) 1318
PpsI GAGTC 1 cut(s) 1318
PscI ACATGT 2 cut(s) 114, 211
PshAI GACNNNNGTC 1 cut(s) 770
Psp124BI GAGCTC 1 cut(s) 587
Psp6I CCWGG 3 cut(s) 928, 1170, 1347
PspFI CCCAGC 1 cut(s) 155
PspGI CCWGG 3 cut(s) 928, 1170, 1347
PspN4I GGNNCC 2 cut(s) 198, 495
PspOMI GGGCCC 1 cut(s) 493
PspPI GGNCC 5 cut(s) 274, 493, 494, 772, 1168
PstI CTGCAG 1 cut(s) 286
PstNI CAGNNNCTG 2 cut(s) 598, 1634
PvuI CGATCG 1 cut(s) 98
PvuII CAGCTG 1 cut(s) 1634
RsaI GTAC 6 cut(s) 480, 801, 825, 1053, 1078, 1161
RsaNI GTAC 6 cut(s) 479, 800, 824, 1052, 1077, 1160
RseI CAYNNNNRTG 2 cut(s) 1088, 1480
SacI GAGCTC 1 cut(s) 587
SaqAI TTAA 5 cut(s) 330, 474, 891, 1116, 1419
SatI GCNGC 6 cut(s) 282, 680, 937, 1124, 1632, 1635
Sau3AI GATC 7 cut(s) 95, 244, 260, 342, 445, 1259, 1732
Sau96I GGNCC 5 cut(s) 274, 493, 494, 772, 1168
SchI GAGTC 1 cut(s) 1318
ScrFI CCNGG 3 cut(s) 930, 1172, 1349
SduI GDGCHC 2 cut(s) 497, 587
SfaNI GCATC 3 cut(s) 1306, 1352, 1540
SfcI CTRYAG 2 cut(s) 282, 1777
Sfr274I CTCGAG 1 cut(s) 80
SinI GGWCC 3 cut(s) 274, 772, 1168
SlaI CTCGAG 1 cut(s) 80
SmiMI CAYNNNNRTG 2 cut(s) 1088, 1480
SmlI CTYRAG 3 cut(s) 80, 371, 890
SmoI CTYRAG 3 cut(s) 80, 371, 890
SsiI CCGC 6 cut(s) 272, 458, 701, 778, 939, 1443
SspMI CTAG 1 cut(s) 1377
SstI GAGCTC 1 cut(s) 587
StyD4I CCNGG 3 cut(s) 928, 1170, 1347
StyI CCWWGG 3 cut(s) 645, 741, 1597
TaiI ACGT 2 cut(s) 825, 1704
TaqI TCGA 4 cut(s) 81, 94, 353, 1674
TaqII GACCGA 1 cut(s) 151
TatI WGTACW 3 cut(s) 478, 1051, 1159
TfiI GAWTC 7 cut(s) 177, 403, 595, 1190, 1243, 1496, 1508
Tru1I TTAA 5 cut(s) 330, 474, 891, 1116, 1419
Tru9I TTAA 5 cut(s) 330, 474, 891, 1116, 1419
TscAI CASTG 4 cut(s) 414, 1024, 1764, 1786
TseFI GTSAC 5 cut(s) 818, 1015, 1249, 1741, 1792
TseI GCWGC 6 cut(s) 281, 679, 936, 1123, 1631, 1634
Tsp45I GTSAC 5 cut(s) 818, 1015, 1249, 1741, 1792
TspGWI ACGGA 1 cut(s) 92
TspRI CASTG 4 cut(s) 414, 1024, 1764, 1786
Van91I CCANNNNNTGG 1 cut(s) 1277
Vha464I CTTAAG 1 cut(s) 890
VpaK11BI GGWCC 3 cut(s) 274, 772, 1168
XapI RAATTY 6 cut(s) 470, 704, 1130, 1211, 1234, 1623
XceI RCATGY 2 cut(s) 118, 215
XcmI CCANNNNNNNNNTGG 1 cut(s) 1723
XhoI CTCGAG 1 cut(s) 80
XmnI GAANNNNTTC 1 cut(s) 1524
XspI CTAG 1 cut(s) 1377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.