Rmu_sc0010270.1_g000002

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010270.1
OG0000039
Physical Location & Seq
Forward (+)
9362 .. 12448
3087 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010270.1_g000002.1.cds

Sequence Viewer

Length: 2148 bp
atggagaaggcgctcagcggagttgaaatgagaagtggagatatagtggaggggatgtaccgaattgaagaccgagttgaaacaagctgtagcattgtggaggcagggttcaagcggattgaagaccgacttgatacacgaaatggagctaaagttggagcttggtctgttgtgcctgaacttgcacagtttacggttggattggatgagcctttgaaggaattgaagatgaaactttttaaggatggagtctcgatgcttgtggtcactgcccccggaggatgtgggaaaactacactggcaacaaagttttgtcaagatgagcaagtgaaagagaaattcaagaataatatcttctttgtcactgtgtcaaacacaccaaacctgagccttattgtgcaagagttataccaacgcaagggttcccaggtgcctactttccaagatgaaataactgcaggcaagtggctgcaaacatttctgaaggaagaaggaaaaaaccctttactattagtcttggatgatgtttggtttggatcagaatccctactagacaagtttcagttcgagatgccagattacaagattttggtcacatcaagatctgaatttccgagatttggttccccatatcatttgcgatctttggattataacaatgccatgaaactttttcatcattccgcatccttgggagataaaagctcacatattccagcatacctctcgagacagatagtagagggctgtaagggatttccacttgcaattacggtggcaggaggatcactttgtggacaaagtatagagatctggcaagaaagactaattgaatggtccaaagggtcttccattcttgattctgagactgaattgcttcttcgcctccaaagcagcttagttgtctcggataaagaaacggctatcatcagggagtgtttcttagaccttggttcattccctgaagaccaaagaatcccagttgctgccctcattgatatgtggacagagtcatatgatcagctagatgaagatactttgtgtgttgcaaagctccacaagctcaccaaccgaagtctggctaatcttgtagtcacacggaaggaccagagccagggggatggatactacagtgaacatttcgttactcagcatgatctgctcagagagttggctatctatgagacaagacaacaacacccaggacatagagaaagactgattctaaacataactggagacaatcttccaaaatggtggagtgagaagaagtatgaatctatgaaagctcgcctattatccatctcaactgatggaaatttctcatcaaaatggcaccacatggaactaccagaagctgaggttctagtcttgaattttcagacgaagaactacgccttacccaaatttgtggacactatgcataaactgaaggtacttgttgtcacaaattttggtttctcgcctgctgaattaagtaatatcccactactggtttcattatctcatctaaagagaattagattggagcgtgtctcaataccttcaataaccaagaaccccatacaattggtgggtctgaagaagatatctctattcatgtgtaccattggaaaagctttcagcgacggttccattcagatttcacacgcatttccaaacctagaggaaattagcattgactattgtaatgatttggcggagatgcctgttgacctctgtgatcttattcatctaaggaagctcagtgtcaccaactcacataagcttcttgccttgcctgaagagattggaaaactggaaaatttggaactgctgagactgaggtcatgtacagacttggcacaattgccaggctcgagcaggaacctaaagaagttgatctttcttgacatttcttattgctttagcatcaaggagttgcctgaagatattggtgaaatgagcagcttaagaaagctcaacatgagagaatgctcaagattgcaggaagtgcctgtatcgattttggatcttgagcatttggaggaagtgatatgtgatgatgagacaagaaatttatgggaacccttacctctccgaaacacaaaaatagtggtggaaaaagaaaatatcaacctaaattggctccataagcttcaattctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

715

Amino Acids

81.38

Weight (kDa)

5.74

Isoelectric Point (pI)

46.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 654
AccB1I GGYRCC 2 cut(s) 430, 1335
AciI CCGC 4 cut(s) 18, 115, 684, 1700
AclWI GGATC 3 cut(s) 544, 793, 2019
AcsI RAATTY 8 cut(s) 338, 608, 1318, 1375, 1406, 1450, 1804, 2056
AcuI CTGAAG 6 cut(s) 503, 984, 1451, 1601, 1803, 1947
AdeI CACNNNGTG 1 cut(s) 794
AfaI GTAC 4 cut(s) 59, 1437, 1606, 1834
AfiI CCNNNNNNNGG 5 cut(s) 418, 620, 1078, 1114, 1492
AflII CTTAAG 1 cut(s) 1951
AjnI CCWGG 4 cut(s) 426, 1113, 1201, 1852
AloI GAACNNNNNNTCC 2 cut(s) 92, 124
Alw26I GTCTC 9 cut(s) 256, 724, 860, 910, 1178, 1233, 1540, 1813, 2042
AlwI GGATC 3 cut(s) 544, 793, 2019
AlwNI CAGNNNCTG 2 cut(s) 986, 1358
Ama87I CYCGRG 2 cut(s) 727, 1858
ApeKI GCWGC 4 cut(s) 469, 894, 986, 1947
ApoI RAATTY 8 cut(s) 338, 608, 1318, 1375, 1406, 1450, 1804, 2056
Asp700I GAANNNNTTC 1 cut(s) 876
AspLEI GCGC 1 cut(s) 13
AspS9I GGNCC 2 cut(s) 837, 1105
AsuC2I CCSGG 1 cut(s) 276
AsuHPI GGTGA 3 cut(s) 1057, 1744, 1949
AvaI CYCGRG 2 cut(s) 727, 1858
AvaII GGWCC 2 cut(s) 837, 1105
BaeI ACNNNNGTAYC 2 cut(s) 1117, 1150
BanI GGYRCC 2 cut(s) 430, 1335
BbsI GAAGAC 4 cut(s) 75, 129, 840, 972
BbvCI CCTCAGC 1 cut(s) 1359
BbvI GCAGC 4 cut(s) 456, 906, 973, 1959
BccI CCATC 4 cut(s) 239, 1115, 1307, 1310
BceAI ACGGC 1 cut(s) 936
BcgI CGANNNNNNTGC 2 cut(s) 708, 742
BciT130I CCWGG 4 cut(s) 428, 1115, 1203, 1854
BciVI GTATCC 1 cut(s) 1118
BclI TGATCA 1 cut(s) 1018
BcnI CCSGG 1 cut(s) 276
BcoDI GTCTC 9 cut(s) 256, 724, 860, 910, 1178, 1233, 1540, 1813, 2042
BfaI CTAG 4 cut(s) 551, 1025, 1367, 1664
BfmI CTRYAG 3 cut(s) 88, 456, 1129
BfoI RGCGCY 1 cut(s) 14
BfrI CTTAAG 1 cut(s) 1951
BfuI GTATCC 1 cut(s) 1118
BglII AGATCT 2 cut(s) 602, 810
BisI GCNGC 4 cut(s) 470, 895, 987, 1948
BlpI GCTNAGC 1 cut(s) 14
BlsI GCNGC 4 cut(s) 471, 896, 988, 1949
Bme1390I CCNGG 5 cut(s) 276, 428, 1115, 1203, 1854
Bme18I GGWCC 2 cut(s) 837, 1105
BmeT110I CYCGRG 2 cut(s) 727, 1858
BmgT120I GGNCC 2 cut(s) 837, 1105
BmiI GGNNCC 8 cut(s) 424, 432, 625, 1337, 1633, 1868, 2067, 2129
BmrFI CCNGG 5 cut(s) 276, 428, 1115, 1203, 1854
BmrI ACTGGG 1 cut(s) 974
BmsI GCATC 5 cut(s) 246, 561, 695, 1695, 1920
BmuI ACTGGG 1 cut(s) 974
BoxI GACNNNNGTC 1 cut(s) 1825
BpiI GAAGAC 4 cut(s) 75, 129, 840, 972
BplI GAGNNNNNCTC 2 cut(s) 1520, 1552
BpmI CTGGAG 1 cut(s) 1257
Bpu10I CCTNAGC 2 cut(s) 386, 1359
Bpu1102I GCTNAGC 1 cut(s) 14
BpuEI CTTGAG 2 cut(s) 1963, 2036
BpuMI CCSGG 1 cut(s) 276
Bsa29I ATCGAT 1 cut(s) 2003
BsaBI GATNNNNATC 1 cut(s) 541
BsaJI CCNNGG 6 cut(s) 274, 426, 690, 949, 1114, 1201
BsaXI ACNNNNNCTCC 8 cut(s) 30, 41, 60, 71, 92, 122, 138, 168
Bsc4I CCNNNNNNNGG 5 cut(s) 418, 620, 1078, 1114, 1492
Bse1I ACTGG 5 cut(s) 303, 980, 1240, 1497, 1803
Bse8I GATNNNNATC 1 cut(s) 541
BseBI CCWGG 4 cut(s) 428, 1115, 1203, 1854
BseCI ATCGAT 1 cut(s) 2003
BseDI CCNNGG 6 cut(s) 274, 426, 690, 949, 1114, 1201
BseGI GGATG 7 cut(s) 60, 211, 250, 287, 526, 686, 1126
BseJI GATNNNNATC 1 cut(s) 541
BseLI CCNNNNNNNGG 5 cut(s) 418, 620, 1078, 1114, 1492
BseMII CTCAG 9 cut(s) 28, 377, 855, 1163, 1177, 1350, 1759, 1808, 1814
BseNI ACTGG 5 cut(s) 303, 980, 1240, 1497, 1803
BseXI GCAGC 4 cut(s) 456, 906, 973, 1959
BshNI GGYRCC 2 cut(s) 430, 1335
BshVI ATCGAT 1 cut(s) 2003
BsiHKCI CYCGRG 2 cut(s) 727, 1858
BsiSI CCGG 1 cut(s) 276
BslI CCNNNNNNNGG 5 cut(s) 418, 620, 1078, 1114, 1492
BsmAI GTCTC 9 cut(s) 256, 724, 860, 910, 1178, 1233, 1540, 1813, 2042
BsmI GAATGC 1 cut(s) 1979
BsoBI CYCGRG 2 cut(s) 727, 1858
Bsp1407I TGTACA 1 cut(s) 1832
Bsp1720I GCTNAGC 1 cut(s) 14
BspACI CCGC 4 cut(s) 18, 115, 684, 1700
BspCNI CTCAG 9 cut(s) 27, 378, 856, 1162, 1176, 1351, 1758, 1809, 1815
BspDI ATCGAT 1 cut(s) 2003
BspLI GGNNCC 8 cut(s) 424, 432, 625, 1337, 1633, 1868, 2067, 2129
BspMAI CTGCAG 1 cut(s) 460
BspPI GGATC 3 cut(s) 544, 793, 2019
BspT107I GGYRCC 2 cut(s) 430, 1335
BspTI CTTAAG 1 cut(s) 1951
BsrGI TGTACA 1 cut(s) 1832
BsrI ACTGG 5 cut(s) 303, 980, 1240, 1497, 1803
BssECI CCNNGG 6 cut(s) 274, 426, 690, 949, 1114, 1201
BssT1I CCWWGG 2 cut(s) 690, 949
Bst2UI CCWGG 4 cut(s) 428, 1115, 1203, 1854
Bst4CI ACNGT 6 cut(s) 189, 196, 367, 775, 1133, 1631
Bst6I CTCTTC 1 cut(s) 1779
BstAFI CTTAAG 1 cut(s) 1951
BstAPI GCANNNNNTGC 2 cut(s) 1159, 1993
BstAUI TGTACA 1 cut(s) 1832
BstC8I GCNNGC 3 cut(s) 460, 1291, 1467
BstF5I GGATG 7 cut(s) 60, 211, 250, 287, 526, 686, 1126
BstH2I RGCGCY 1 cut(s) 14
BstHHI GCGC 1 cut(s) 13
BstMAI GTCTC 9 cut(s) 256, 724, 860, 910, 1178, 1233, 1540, 1813, 2042
BstMWI GCNNNNNNNGC 5 cut(s) 891, 1060, 1159, 1993, 2134
BstNI CCWGG 4 cut(s) 428, 1115, 1203, 1854
BstPAI GACNNNNGTC 1 cut(s) 1825
BstSCI CCNGG 5 cut(s) 274, 426, 1113, 1201, 1852
BstSFI CTRYAG 3 cut(s) 88, 456, 1129
BstV1I GCAGC 4 cut(s) 456, 906, 973, 1959
BstV2I GAAGAC 4 cut(s) 75, 129, 840, 972
BstX2I RGATCY 3 cut(s) 602, 810, 2011
BstXI CCANNNNNNTGG 4 cut(s) 1121, 1257, 1411, 1570
BstYI RGATCY 3 cut(s) 602, 810, 2011
Bsu15I ATCGAT 1 cut(s) 2003
BsuI GTATCC 1 cut(s) 1118
BsuTUI ATCGAT 1 cut(s) 2003
BtsCI GGATG 7 cut(s) 60, 211, 250, 287, 526, 686, 1126
BtsI GCAGTG 1 cut(s) 267
BtsIMutI CAGTG 5 cut(s) 267, 296, 363, 1138, 1753
Cac8I GCNNGC 3 cut(s) 460, 1291, 1467
CaiI CAGNNNCTG 2 cut(s) 986, 1358
CfoI GCGC 1 cut(s) 13
Cfr13I GGNCC 2 cut(s) 837, 1105
ClaI ATCGAT 1 cut(s) 2003
Csp6I GTAC 4 cut(s) 58, 1436, 1605, 1833
CspCI CAANNNNNGTGG 4 cut(s) 756, 791, 2076, 2111
CviAII CATG 6 cut(s) 664, 1154, 1342, 1600, 1830, 1966
CviQI GTAC 4 cut(s) 58, 1436, 1605, 1833
DraIII CACNNNGTG 1 cut(s) 794
Eam1104I CTCTTC 1 cut(s) 1779
EarI CTCTTC 1 cut(s) 1779
EciI GGCGGA 1 cut(s) 1715
Eco130I CCWWGG 2 cut(s) 690, 949
Eco32I GATATC 1 cut(s) 1590
Eco47I GGWCC 2 cut(s) 837, 1105
Eco57I CTGAAG 6 cut(s) 503, 984, 1451, 1601, 1803, 1947
Eco88I CYCGRG 2 cut(s) 727, 1858
EcoRII CCWGG 4 cut(s) 426, 1113, 1201, 1852
EcoRV GATATC 1 cut(s) 1590
EcoT14I CCWWGG 2 cut(s) 690, 949
EcoT22I ATGCAT 1 cut(s) 1425
ErhI CCWWGG 2 cut(s) 690, 949
FaeI CATG 6 cut(s) 667, 1157, 1345, 1603, 1833, 1969
FalI AAGNNNNNCTT 4 cut(s) 114, 146, 1868, 1900
FatI CATG 6 cut(s) 663, 1153, 1341, 1599, 1829, 1965
FauNDI CATATG 1 cut(s) 1015
FbaI TGATCA 1 cut(s) 1018
Fnu4HI GCNGC 4 cut(s) 470, 895, 987, 1948
FokI GGATG 7 cut(s) 67, 218, 257, 294, 533, 673, 1133
Fsp4HI GCNGC 4 cut(s) 470, 895, 987, 1948
FspBI CTAG 4 cut(s) 551, 1025, 1367, 1664
GlaI GCGC 1 cut(s) 12
GluI GCNGC 4 cut(s) 470, 895, 987, 1948
GsuI CTGGAG 1 cut(s) 1257
HaeII RGCGCY 1 cut(s) 14
HapII CCGG 1 cut(s) 276
HhaI GCGC 1 cut(s) 13
Hin1II CATG 6 cut(s) 667, 1157, 1345, 1603, 1833, 1969
Hin6I GCGC 1 cut(s) 11
HinP1I GCGC 1 cut(s) 11
HincII GTYRAC 1 cut(s) 1714
HindII GTYRAC 1 cut(s) 1714
HindIII AAGCTT 3 cut(s) 1617, 1766, 2135
HinfI GANTC 7 cut(s) 249, 542, 860, 975, 1010, 1222, 1277
HpaII CCGG 1 cut(s) 276
HphI GGTGA 3 cut(s) 1057, 1744, 1949
Hpy166II GTNNAC 7 cut(s) 192, 797, 1005, 1136, 1414, 1605, 1714
Hpy8I GTNNAC 7 cut(s) 192, 797, 1005, 1136, 1414, 1605, 1714
Hpy99I CGWCG 1 cut(s) 1631
HpyAV CCTTC 6 cut(s) 211, 478, 485, 1096, 1426, 1554
HpyCH4III ACNGT 6 cut(s) 189, 196, 367, 775, 1133, 1631
HpyCH4V TGCA 8 cut(s) 185, 400, 458, 472, 767, 1049, 1423, 1987
HpyF10VI GCNNNNNNNGC 5 cut(s) 891, 1060, 1159, 1993, 2134
Hsp92II CATG 6 cut(s) 667, 1157, 1345, 1603, 1833, 1969
HspAI GCGC 1 cut(s) 11
Ksp22I TGATCA 1 cut(s) 1018
LmnI GCTCC 5 cut(s) 146, 158, 1059, 1528, 2133
Lsp1109I GCAGC 4 cut(s) 456, 906, 973, 1959
LweI GCATC 5 cut(s) 246, 561, 695, 1695, 1920
MaeI CTAG 4 cut(s) 551, 1025, 1367, 1664
MaeIII GTNAC 7 cut(s) 265, 361, 592, 1093, 1144, 1444, 1750
MfeI CAATTG 2 cut(s) 1568, 1847
MflI RGATCY 3 cut(s) 602, 810, 2011
MlyI GAGTC 2 cut(s) 258, 1019
MmeI TCCRAC 2 cut(s) 136, 178
Mph1103I ATGCAT 1 cut(s) 1425
MroXI GAANNNNTTC 1 cut(s) 876
MseI TTAA 3 cut(s) 240, 1475, 1952
MslI CAYNNNNRTG 2 cut(s) 998, 1330
MspA1I CMGCKG 1 cut(s) 18
MspCI CTTAAG 1 cut(s) 1951
MspI CCGG 1 cut(s) 276
MspR9I CCNGG 5 cut(s) 276, 428, 1115, 1203, 1854
MunI CAATTG 2 cut(s) 1568, 1847
Mva1269I GAATGC 1 cut(s) 1979
MvaI CCWGG 4 cut(s) 428, 1115, 1203, 1854
MwoI GCNNNNNNNGC 5 cut(s) 891, 1060, 1159, 1993, 2134
NciI CCSGG 1 cut(s) 276
NdeI CATATG 1 cut(s) 1015
NlaIII CATG 6 cut(s) 667, 1157, 1345, 1603, 1833, 1969
NlaIV GGNNCC 8 cut(s) 424, 432, 625, 1337, 1633, 1868, 2067, 2129
NmuCI GTSAC 6 cut(s) 265, 361, 592, 1093, 1444, 1750
NsiI ATGCAT 1 cut(s) 1425
PaeR7I CTCGAG 2 cut(s) 727, 1858
PctI GAATGC 1 cut(s) 1979
PdmI GAANNNNTTC 1 cut(s) 876
PfeI GAWTC 5 cut(s) 542, 860, 975, 1222, 1277
PflFI GACNNNGTC 1 cut(s) 1009
PkrI GCNGC 4 cut(s) 471, 896, 988, 1949
PleI GAGTC 2 cut(s) 257, 1018
PpsI GAGTC 2 cut(s) 257, 1018
PshAI GACNNNNGTC 1 cut(s) 1825
PsiI TTATAA 1 cut(s) 654
Psp6I CCWGG 4 cut(s) 426, 1113, 1201, 1852
PspGI CCWGG 4 cut(s) 426, 1113, 1201, 1852
PspN4I GGNNCC 8 cut(s) 424, 432, 625, 1337, 1633, 1868, 2067, 2129
PspPI GGNCC 2 cut(s) 837, 1105
PspXI VCTCGAGB 1 cut(s) 1858
PstI CTGCAG 1 cut(s) 460
PstNI CAGNNNCTG 2 cut(s) 986, 1358
PsuI RGATCY 3 cut(s) 602, 810, 2011
PsyI GACNNNGTC 1 cut(s) 1009
RsaI GTAC 4 cut(s) 59, 1437, 1606, 1834
RsaNI GTAC 4 cut(s) 58, 1436, 1605, 1833
RseI CAYNNNNRTG 2 cut(s) 998, 1330
SaqAI TTAA 3 cut(s) 240, 1475, 1952
SatI GCNGC 4 cut(s) 470, 895, 987, 1948
Sau96I GGNCC 2 cut(s) 837, 1105
SchI GAGTC 2 cut(s) 258, 1019
ScrFI CCNGG 5 cut(s) 276, 428, 1115, 1203, 1854
SfaNI GCATC 5 cut(s) 246, 561, 695, 1695, 1920
SfcI CTRYAG 3 cut(s) 88, 456, 1129
Sfr274I CTCGAG 2 cut(s) 727, 1858
SinI GGWCC 2 cut(s) 837, 1105
SlaI CTCGAG 2 cut(s) 727, 1858
SmiMI CAYNNNNRTG 2 cut(s) 998, 1330
SmlI CTYRAG 5 cut(s) 727, 1858, 1951, 1978, 2015
SmoI CTYRAG 5 cut(s) 727, 1858, 1951, 1978, 2015
SsiI CCGC 4 cut(s) 18, 115, 684, 1700
SspMI CTAG 4 cut(s) 551, 1025, 1367, 1664
StyD4I CCNGG 5 cut(s) 274, 426, 1113, 1201, 1852
StyI CCWWGG 2 cut(s) 690, 949
TaaI ACNGT 6 cut(s) 189, 196, 367, 775, 1133, 1631
TaqI TCGA 5 cut(s) 254, 567, 728, 1859, 2003
TaqII GACCGA 2 cut(s) 87, 141
TatI WGTACW 1 cut(s) 1832
TfiI GAWTC 5 cut(s) 542, 860, 975, 1222, 1277
Tru1I TTAA 3 cut(s) 240, 1475, 1952
Tru9I TTAA 3 cut(s) 240, 1475, 1952
TscAI CASTG 5 cut(s) 274, 303, 370, 1138, 1753
TseFI GTSAC 6 cut(s) 265, 361, 592, 1093, 1444, 1750
TseI GCWGC 4 cut(s) 469, 894, 986, 1947
Tsp45I GTSAC 6 cut(s) 265, 361, 592, 1093, 1444, 1750
TspGWI ACGGA 1 cut(s) 1114
TspRI CASTG 5 cut(s) 274, 303, 370, 1138, 1753
Tth111I GACNNNGTC 1 cut(s) 1009
Vha464I CTTAAG 1 cut(s) 1951
VpaK11BI GGWCC 2 cut(s) 837, 1105
XapI RAATTY 8 cut(s) 338, 608, 1318, 1375, 1406, 1450, 1804, 2056
XcmI CCANNNNNNNNNTGG 2 cut(s) 1075, 1570
XhoI CTCGAG 2 cut(s) 727, 1858
XmnI GAANNNNTTC 1 cut(s) 876
XspI CTAG 4 cut(s) 551, 1025, 1367, 1664
Zsp2I ATGCAT 1 cut(s) 1425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.