Rmu_sc0013101.1_g000008

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013101.1
OG0000039
Physical Location & Seq
Forward (+)
31823 .. 34913
3091 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013101.1_g000008.1.cds

Sequence Viewer

Length: 2565 bp
atggatcttattggaggtgctgttttaggaacagcattcggtagactctacgagagcgttgaagatctgattgtcaagaaccgcttgttcagagttttcttccgaaaaatcaaatccaggctagacgatctgaacccgctcatggccgagatgactcagtctaaccagcaactgtcttacacacagaacgatgagcttagaggtttagaagcagtactgaaggttggcgaagcactagttctaaagtgctcaaatgttaggcagtgggatctctacaggaagtacaaatatgccacaaaacttcttgcatgggaagaagatcttgaaagacaattgcagctgctgcaggtgcacggaatcagggatgggaagaagaccgcggaggcagtagggaatataggagtttcgacggggaagatgcaggcttctttagcaactgtggaggtttctgtagggagtgtgaaggtgggggtcaaccaaatttctagtactctcgaggaggtgaaccaactcatgaaacgaaattttgcgatacaagaccaatctgctgaaagtagagcttggtgtgcagtccctgaacttccagaggttatagttggattgaaagctcctttgaaggatttgaagacacagcttcttgggaatgatggatactcaatgcttgtgctcaccgctcccggaggatgtgggaaaactaccttggcaacaaaattttgcaaagatcaggaagtcaaagataaattcggcacaaatatcttctttgtcactgtttcaaagaagtatagcttttgttctattgtagaacaactacaccgacacaagggttctcaagttccttccctccaaaacgaagtgaaagctgttcaatggctgcaaaaattttgggcggatgcagaaaataaatctttactgttggtcttagatgatgtttggtctggatcagaatctcttcttaacaaatttcaatgcagaatgacaaatgttaagattctcgtgacatcaagatctgaatttcgagcattcagtcgtccccatcatttagcaatgttgactgatgacgatgcaatgcgactttttcgtcattcagcatccttgggagataagagctctcatattccagcagatctttcaagaaagatagtaaagcgttgtaagggatttccacttgccattacagtggtgggcagatcgctttgtgcacaacctatagagatgtggcaacacagactaaatcaatggtctaaaggttcatctatttttgattctgagactgagctacttttttccctccaaagcagcttagatgctttggataaggaaagggctatcatcagagaatgtttcttggaccttggttcatttcctgaagacacagaaatccctgttgatgccctcattgatatatggtccgagttatatgaaattgatgaagacacttcatgtattgcaaacctctatgaactcaacaatcggagtcttgccaatcttatagacaacagggaatcgaagttggttggggaaggatattatggtgaccactatgtcacccaacatgatgtgcttcgggagctggctatttatcactcaaaaatagattcggtagagcatagagagagattgatcatagacatatgtggaagcaatcttcccaagtggtggagggaacaaaagtatcaagttatgaaagctcgccttgtatctatatcaacagatggagagtctccaacttggaaatggcccagcgtgcatctgccagaaacagaggtactggtcttgaatcttcgggagagacagcatgctatagccgaatttgtggagaaaatggacaaattgaaggtactagtaatcacaagtgaggacaggtatggtgctcccttgcataattttcaagtactaagtcggttatccaatctaacgagaatcagattagagcgcatctcagtttcatccatatttgagaactccatacaagtgaagagtgtacggaagttgtctttgatcaaatgttattacggaattggttcagccaaactttcccatgcttttccaaatctagaagagatacacatcaaatacgctataataacacttaactcgtcaagggctattgagacagtaattagcgagacagtacttagcgggctatgtgatctgatttccctaaagaaggtcaccctcacaggtgttcgaggactgttgttatgggctttccttagcgagattgaaaatttggtcaatttacaagtgttgaggctggcatgtcctgttctttcaaagcttccctcgatcaaaaacctccacaagttgaactttcttggcatcgttaattgcagaaaacttggcgagttacctgaatgcattggtgaaatgaggagtttaagaaagatcgacttgagacgttgccctttattgaacaagctgcctcgatcagtattggatttgaagcagttagaggaggtgatatgtgatgaagatacagaaagcttatggaaatccctgttgcccagtttcagagacagaaaccaagacatacgcttagtgattgggccgccacgattgcgataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

854

Amino Acids

96.98

Weight (kDa)

8.45

Isoelectric Point (pI)

39.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 337
AasI GACNNNNNNGTC 2 cut(s) 1077, 1541
Acc36I ACCTGC 1 cut(s) 337
AccB7I CCANNNNNTGG 1 cut(s) 1656
AccBSI CCGCTC 2 cut(s) 139, 674
AccI GTMKAC 1 cut(s) 43
AccII CGCG 1 cut(s) 380
AciI CCGC 8 cut(s) 82, 137, 378, 380, 672, 887, 2139, 2549
AclWI GGATC 3 cut(s) 12, 276, 946
AcoI YGGCCR 1 cut(s) 144
AcsI RAATTY 9 cut(s) 480, 523, 710, 740, 878, 959, 1010, 1808, 2227
AcuI CTGAAG 2 cut(s) 239, 1386
AfaI GTAC 8 cut(s) 216, 284, 490, 1767, 1839, 1893, 1983, 2133
AfiI CCNNNNNNNGG 4 cut(s) 142, 820, 1656, 2167
AhlI ACTAGT 2 cut(s) 235, 1840
AjnI CCWGG 1 cut(s) 116
AjuI GAANNNNNNNTTGG 2 cut(s) 683, 715
Alw21I GWGCWC 6 cut(s) 251, 354, 669, 1109, 1201, 1873
Alw26I GTCTC 7 cut(s) 1262, 1725, 1783, 2105, 2120, 2389, 2508
Alw44I GTGCAC 2 cut(s) 350, 1197
AlwI GGATC 3 cut(s) 12, 276, 946
AlwNI CAGNNNCTG 3 cut(s) 172, 343, 575
Ama87I CYCGRG 1 cut(s) 494
AoxI GGCC 3 cut(s) 144, 1736, 2546
ApaLI GTGCAC 2 cut(s) 350, 1197
ApeKI GCWGC 6 cut(s) 337, 340, 343, 871, 1296, 2419
ApoI RAATTY 9 cut(s) 480, 523, 710, 740, 878, 959, 1010, 1808, 2227
Asp700I GAANNNNTTC 2 cut(s) 948, 2020
AspLEI GCGC 1 cut(s) 1935
AspS9I GGNCC 4 cut(s) 1348, 1407, 1737, 2546
AsuC2I CCSGG 1 cut(s) 678
AsuHPI GGTGA 7 cut(s) 514, 661, 1537, 1544, 2164, 2375, 2470
AvaI CYCGRG 1 cut(s) 494
AvaII GGWCC 2 cut(s) 1348, 1407
BaeGI GKGCMC 2 cut(s) 354, 1201
BaeI ACNNNNGTAYC 2 cut(s) 1655, 1688
BanII GRGCYC 1 cut(s) 1109
BauI CACGAG 1 cut(s) 992
BbsI GAAGAC 4 cut(s) 380, 632, 1374, 1437
Bbv12I GWGCWC 6 cut(s) 251, 354, 669, 1109, 1201, 1873
BbvI GCAGC 6 cut(s) 327, 330, 349, 858, 1308, 2406
BccI CCATC 4 cut(s) 359, 641, 1041, 1706
BciT130I CCWGG 1 cut(s) 118
BciVI GTATCC 1 cut(s) 644
BclI TGATCA 2 cut(s) 1620, 1998
BcnI CCSGG 1 cut(s) 678
BcoDI GTCTC 7 cut(s) 1262, 1725, 1783, 2105, 2120, 2389, 2508
BcuI ACTAGT 2 cut(s) 235, 1840
BfaI CTAG 5 cut(s) 122, 236, 486, 1841, 2054
BfmI CTRYAG 5 cut(s) 274, 344, 450, 1206, 1800
BfuAI ACCTGC 1 cut(s) 337
BfuI GTATCC 1 cut(s) 644
BglII AGATCT 4 cut(s) 64, 319, 1004, 1123
BisI GCNGC 7 cut(s) 338, 341, 344, 872, 1297, 2420, 2549
BlsI GCNGC 7 cut(s) 339, 342, 345, 873, 1298, 2421, 2550
BmcAI AGTACT 4 cut(s) 216, 490, 1893, 2133
Bme1390I CCNGG 2 cut(s) 118, 678
Bme18I GGWCC 2 cut(s) 1348, 1407
BmeT110I CYCGRG 1 cut(s) 494
BmgT120I GGNCC 4 cut(s) 1348, 1407, 1737, 2546
BmrFI CCNGG 2 cut(s) 118, 678
BmrI ACTGGG 1 cut(s) 2499
BmsI GCATC 9 cut(s) 408, 880, 1051, 1097, 1294, 1378, 1756, 1944, 2328
BmuI ACTGGG 1 cut(s) 2499
BpiI GAAGAC 4 cut(s) 380, 632, 1374, 1437
BplI GAGNNNNNCTC 2 cut(s) 1922, 1954
Bpu10I CCTNAGC 1 cut(s) 2213
BpuEI CTTGAG 2 cut(s) 813, 2413
BpuMI CCSGG 1 cut(s) 678
BsaBI GATNNNNATC 2 cut(s) 943, 2066
BsaJI CCNNGG 4 cut(s) 378, 699, 1092, 1351
BsaXI ACNNNNNCTCC 2 cut(s) 6, 36
Bsc4I CCNNNNNNNGG 4 cut(s) 142, 820, 1656, 2167
Bse1I ACTGG 2 cut(s) 1773, 2505
Bse3DI GCAATG 2 cut(s) 1050, 1071
Bse8I GATNNNNATC 2 cut(s) 943, 2066
BseBI CCWGG 1 cut(s) 118
BseDI CCNNGG 4 cut(s) 378, 699, 1092, 1351
BseGI GGATG 5 cut(s) 370, 689, 895, 1088, 1946
BseJI GATNNNNATC 2 cut(s) 943, 2066
BseLI CCNNNNNNNGG 4 cut(s) 142, 820, 1656, 2167
BseMI GCAATG 2 cut(s) 1050, 1071
BseMII CTCAG 4 cut(s) 170, 1257, 1263, 1953
BseNI ACTGG 2 cut(s) 1773, 2505
BseRI GAGGAG 3 cut(s) 512, 2386, 2468
BseSI GKGCMC 2 cut(s) 354, 1201
BseXI GCAGC 6 cut(s) 327, 330, 349, 858, 1308, 2406
BseYI CCCAGC 1 cut(s) 1739
BsgI GTGCAG 1 cut(s) 588
Bsh1236I CGCG 1 cut(s) 380
BshFI GGCC 3 cut(s) 146, 1738, 2548
BsiHKAI GWGCWC 6 cut(s) 251, 354, 669, 1109, 1201, 1873
BsiHKCI CYCGRG 1 cut(s) 494
BsiSI CCGG 1 cut(s) 678
BslFI GGGAC 2 cut(s) 557, 1014
BslI CCNNNNNNNGG 4 cut(s) 142, 820, 1656, 2167
BsmAI GTCTC 7 cut(s) 1262, 1725, 1783, 2105, 2120, 2389, 2508
BsmBI CGTCTC 1 cut(s) 2389
BsmFI GGGAC 2 cut(s) 557, 1014
BsmI GAATGC 3 cut(s) 35, 1019, 2360
BsnI GGCC 3 cut(s) 146, 1738, 2548
BsoBI CYCGRG 1 cut(s) 494
Bsp1286I GDGCHC 6 cut(s) 251, 354, 669, 1109, 1201, 1873
BspACI CCGC 8 cut(s) 82, 137, 378, 380, 672, 887, 2139, 2549
BspANI GGCC 3 cut(s) 146, 1738, 2548
BspCNI CTCAG 4 cut(s) 169, 1258, 1264, 1952
BspFNI CGCG 1 cut(s) 380
BspHI TCATGA 1 cut(s) 513
BspMAI CTGCAG 1 cut(s) 348
BspMI ACCTGC 1 cut(s) 337
BspPI GGATC 3 cut(s) 12, 276, 946
BsrBI CCGCTC 2 cut(s) 139, 674
BsrDI GCAATG 2 cut(s) 1050, 1071
BsrI ACTGG 2 cut(s) 1773, 2505
BssECI CCNNGG 4 cut(s) 378, 699, 1092, 1351
BssSI CACGAG 1 cut(s) 992
BssT1I CCWWGG 3 cut(s) 699, 1092, 1351
Bst2BI CACGAG 1 cut(s) 992
Bst2UI CCWGG 1 cut(s) 118
Bst4CI ACNGT 8 cut(s) 174, 439, 769, 912, 1177, 2116, 2131, 2196
Bst6I CTCTTC 3 cut(s) 954, 1970, 2052
BstAPI GCANNNNNTGC 1 cut(s) 343
BstC8I GCNNGC 7 cut(s) 423, 1572, 1690, 1745, 1797, 2141, 2256
BstDSI CCRYGG 1 cut(s) 378
BstEII GGTNACC 2 cut(s) 1532, 2170
BstENI CCTNNNNNAGG 1 cut(s) 2165
BstF5I GGATG 5 cut(s) 370, 689, 895, 1088, 1946
BstFNI CGCG 1 cut(s) 380
BstHHI GCGC 1 cut(s) 1935
BstMAI GTCTC 7 cut(s) 1262, 1725, 1783, 2105, 2120, 2389, 2508
BstMWI GCNNNNNNNGC 7 cut(s) 343, 349, 431, 566, 1567, 1744, 2557
BstNI CCWGG 1 cut(s) 118
BstNSI RCATGY 2 cut(s) 1799, 2262
BstPI GGTNACC 2 cut(s) 1532, 2170
BstSCI CCNGG 2 cut(s) 116, 676
BstSFI CTRYAG 5 cut(s) 274, 344, 450, 1206, 1800
BstSLI GKGCMC 2 cut(s) 354, 1201
BstUI CGCG 1 cut(s) 380
BstV1I GCAGC 6 cut(s) 327, 330, 349, 858, 1308, 2406
BstV2I GAAGAC 4 cut(s) 380, 632, 1374, 1437
BstX2I RGATCY 6 cut(s) 4, 64, 268, 319, 1004, 1123
BstXI CCANNNNNNTGG 1 cut(s) 1177
BstYI RGATCY 6 cut(s) 4, 64, 268, 319, 1004, 1123
BsuI GTATCC 1 cut(s) 644
BsuRI GGCC 3 cut(s) 146, 1738, 2548
BtgI CCRYGG 1 cut(s) 378
BtsCI GGATG 5 cut(s) 370, 689, 895, 1088, 1946
BtsI GCAGTG 1 cut(s) 269
BtsIMutI CAGTG 3 cut(s) 269, 765, 1182
BveI ACCTGC 1 cut(s) 337
Cac8I GCNNGC 7 cut(s) 423, 1572, 1690, 1745, 1797, 2141, 2256
CaiI CAGNNNCTG 3 cut(s) 172, 343, 575
CciI TCATGA 1 cut(s) 513
CfoI GCGC 1 cut(s) 1935
Cfr13I GGNCC 4 cut(s) 1348, 1407, 1737, 2546
Cfr42I CCGCGG 1 cut(s) 381
Csp6I GTAC 8 cut(s) 215, 283, 489, 1766, 1838, 1892, 1982, 2132
CviAII CATG 8 cut(s) 142, 309, 514, 1440, 1553, 1796, 2039, 2259
CviQI GTAC 8 cut(s) 215, 283, 489, 1766, 1838, 1892, 1982, 2132
DrdI GACNNNNNNGTC 2 cut(s) 1077, 1541
DseDI GACNNNNNNGTC 2 cut(s) 1077, 1541
EaeI YGGCCR 1 cut(s) 144
Eam1104I CTCTTC 3 cut(s) 954, 1970, 2052
EarI CTCTTC 3 cut(s) 954, 1970, 2052
EciI GGCGGA 1 cut(s) 902
Ecl136II GAGCTC 1 cut(s) 1107
Eco130I CCWWGG 3 cut(s) 699, 1092, 1351
Eco24I GRGCYC 1 cut(s) 1109
Eco47I GGWCC 2 cut(s) 1348, 1407
Eco53kI GAGCTC 1 cut(s) 1107
Eco57I CTGAAG 2 cut(s) 239, 1386
Eco88I CYCGRG 1 cut(s) 494
Eco91I GGTNACC 2 cut(s) 1532, 2170
EcoICRI GAGCTC 1 cut(s) 1107
EcoNI CCTNNNNNAGG 1 cut(s) 2165
EcoO65I GGTNACC 2 cut(s) 1532, 2170
EcoRII CCWGG 1 cut(s) 116
EcoT14I CCWWGG 3 cut(s) 699, 1092, 1351
EcoT22I ATGCAT 1 cut(s) 2360
EcoT38I GRGCYC 1 cut(s) 1109
ErhI CCWWGG 3 cut(s) 699, 1092, 1351
Esp3I CGTCTC 1 cut(s) 2389
FaeI CATG 8 cut(s) 145, 312, 517, 1443, 1556, 1799, 2042, 2262
FaqI GGGAC 2 cut(s) 557, 1014
FatI CATG 8 cut(s) 141, 308, 513, 1439, 1552, 1795, 2038, 2258
FauI CCCGC 2 cut(s) 144, 2132
FauNDI CATATG 1 cut(s) 1631
FbaI TGATCA 2 cut(s) 1620, 1998
FblI GTMKAC 1 cut(s) 43
Fnu4HI GCNGC 7 cut(s) 338, 341, 344, 872, 1297, 2420, 2549
FokI GGATG 5 cut(s) 377, 696, 902, 1075, 1933
FriOI GRGCYC 1 cut(s) 1109
Fsp4HI GCNGC 7 cut(s) 338, 341, 344, 872, 1297, 2420, 2549
FspBI CTAG 5 cut(s) 122, 236, 486, 1841, 2054
GlaI GCGC 1 cut(s) 1934
GluI GCNGC 7 cut(s) 338, 341, 344, 872, 1297, 2420, 2549
GsaI CCCAGC 1 cut(s) 1743
HaeIII GGCC 3 cut(s) 146, 1738, 2548
HapII CCGG 1 cut(s) 678
HhaI GCGC 1 cut(s) 1935
Hin1II CATG 8 cut(s) 145, 312, 517, 1443, 1556, 1799, 2042, 2262
Hin6I GCGC 1 cut(s) 1933
HinP1I GCGC 1 cut(s) 1933
HincII GTYRAC 2 cut(s) 475, 1050
HindII GTYRAC 2 cut(s) 475, 1050
HindIII AAGCTT 2 cut(s) 2276, 2482
HpaII CCGG 1 cut(s) 678
HphI GGTGA 7 cut(s) 514, 661, 1537, 1544, 2164, 2375, 2470
Hpy166II GTNNAC 7 cut(s) 44, 352, 475, 505, 1050, 1199, 1982
Hpy8I GTNNAC 7 cut(s) 44, 352, 475, 505, 1050, 1199, 1982
Hpy99I CGWCG 1 cut(s) 412
HpyAV CCTTC 7 cut(s) 214, 457, 610, 846, 1514, 1828, 2161
HpyCH4III ACNGT 8 cut(s) 174, 439, 769, 912, 1177, 2116, 2131, 2196
HpyCH4IV ACGT 1 cut(s) 2398
HpyF10VI GCNNNNNNNGC 7 cut(s) 343, 349, 431, 566, 1567, 1744, 2557
HpySE526I ACGT 1 cut(s) 2398
Hsp92II CATG 8 cut(s) 145, 312, 517, 1443, 1556, 1799, 2042, 2262
HspAI GCGC 1 cut(s) 1933
Ksp22I TGATCA 2 cut(s) 1620, 1998
KspI CCGCGG 1 cut(s) 381
LmnI GCTCC 4 cut(s) 613, 679, 1567, 1876
Lsp1109I GCAGC 6 cut(s) 327, 330, 349, 858, 1308, 2406
LweI GCATC 9 cut(s) 408, 880, 1051, 1097, 1294, 1378, 1756, 1944, 2328
MaeI CTAG 5 cut(s) 122, 236, 486, 1841, 2054
MaeII ACGT 1 cut(s) 2398
MaeIII GTNAC 6 cut(s) 763, 994, 1532, 1543, 2170, 2346
MbiI CCGCTC 2 cut(s) 139, 674
MfeI CAATTG 1 cut(s) 332
MflI RGATCY 6 cut(s) 4, 64, 268, 319, 1004, 1123
MhlI GDGCHC 6 cut(s) 251, 354, 669, 1109, 1201, 1873
MlyI GAGTC 4 cut(s) 39, 148, 1483, 1727
MmeI TCCRAC 2 cut(s) 577, 1748
Mph1103I ATGCAT 1 cut(s) 2360
MroXI GAANNNNTTC 2 cut(s) 948, 2020
MseI TTAA 5 cut(s) 954, 984, 2091, 2325, 2378
MslI CAYNNNNRTG 2 cut(s) 1175, 1970
MspA1I CMGCKG 2 cut(s) 340, 380
MspI CCGG 1 cut(s) 678
MspR9I CCNGG 2 cut(s) 118, 678
MunI CAATTG 1 cut(s) 332
Mva1269I GAATGC 3 cut(s) 35, 1019, 2360
MvaI CCWGG 1 cut(s) 118
MvnI CGCG 1 cut(s) 380
MwoI GCNNNNNNNGC 7 cut(s) 343, 349, 431, 566, 1567, 1744, 2557
NciI CCSGG 1 cut(s) 678
NdeI CATATG 1 cut(s) 1631
NlaIII CATG 8 cut(s) 145, 312, 517, 1443, 1556, 1799, 2042, 2262
NmeAIII GCCGAG 1 cut(s) 172
NmuCI GTSAC 5 cut(s) 763, 994, 1532, 1543, 2170
NsiI ATGCAT 1 cut(s) 2360
NspI RCATGY 2 cut(s) 1799, 2262
PaeI GCATGC 1 cut(s) 1799
PaeR7I CTCGAG 1 cut(s) 494
PagI TCATGA 1 cut(s) 513
PaqCI CACCTGC 1 cut(s) 337
PctI GAATGC 3 cut(s) 35, 1019, 2360
PdmI GAANNNNTTC 2 cut(s) 948, 2020
PfeI GAWTC 8 cut(s) 357, 944, 988, 1262, 1502, 1595, 1777, 1920
PflFI GACNNNGTC 1 cut(s) 157
PflMI CCANNNNNTGG 1 cut(s) 1656
PfoI TCCNGGA 1 cut(s) 676
PkrI GCNGC 7 cut(s) 339, 342, 345, 873, 1298, 2421, 2550
PleI GAGTC 4 cut(s) 39, 148, 1482, 1726
PpsI GAGTC 4 cut(s) 39, 148, 1482, 1726
Psp124BI GAGCTC 1 cut(s) 1109
Psp6I CCWGG 1 cut(s) 116
PspEI GGTNACC 2 cut(s) 1532, 2170
PspFI CCCAGC 1 cut(s) 1739
PspGI CCWGG 1 cut(s) 116
PspPI GGNCC 4 cut(s) 1348, 1407, 1737, 2546
PstI CTGCAG 1 cut(s) 348
PstNI CAGNNNCTG 3 cut(s) 172, 343, 575
PsuI RGATCY 6 cut(s) 4, 64, 268, 319, 1004, 1123
PsyI GACNNNGTC 1 cut(s) 157
PvuII CAGCTG 1 cut(s) 340
RsaI GTAC 8 cut(s) 216, 284, 490, 1767, 1839, 1893, 1983, 2133
RsaNI GTAC 8 cut(s) 215, 283, 489, 1766, 1838, 1892, 1982, 2132
RseI CAYNNNNRTG 2 cut(s) 1175, 1970
SacI GAGCTC 1 cut(s) 1109
SacII CCGCGG 1 cut(s) 381
SaqAI TTAA 5 cut(s) 954, 984, 2091, 2325, 2378
SatI GCNGC 7 cut(s) 338, 341, 344, 872, 1297, 2420, 2549
Sau96I GGNCC 4 cut(s) 1348, 1407, 1737, 2546
ScaI AGTACT 4 cut(s) 216, 490, 1893, 2133
SchI GAGTC 4 cut(s) 39, 148, 1483, 1727
ScrFI CCNGG 2 cut(s) 118, 678
SduI GDGCHC 6 cut(s) 251, 354, 669, 1109, 1201, 1873
SfaNI GCATC 9 cut(s) 408, 880, 1051, 1097, 1294, 1378, 1756, 1944, 2328
SfcI CTRYAG 5 cut(s) 274, 344, 450, 1206, 1800
Sfr274I CTCGAG 1 cut(s) 494
Sfr303I CCGCGG 1 cut(s) 381
SgrBI CCGCGG 1 cut(s) 381
SinI GGWCC 2 cut(s) 1348, 1407
SlaI CTCGAG 1 cut(s) 494
SmiMI CAYNNNNRTG 2 cut(s) 1175, 1970
SmlI CTYRAG 3 cut(s) 494, 828, 2392
SmoI CTYRAG 3 cut(s) 494, 828, 2392
SpeI ACTAGT 2 cut(s) 235, 1840
SphI GCATGC 1 cut(s) 1799
SsiI CCGC 8 cut(s) 82, 137, 378, 380, 672, 887, 2139, 2549
SspMI CTAG 5 cut(s) 122, 236, 486, 1841, 2054
SstI GAGCTC 1 cut(s) 1109
StyD4I CCNGG 2 cut(s) 116, 676
StyI CCWWGG 3 cut(s) 699, 1092, 1351
TaaI ACNGT 8 cut(s) 174, 439, 769, 912, 1177, 2116, 2131, 2196
TaiI ACGT 1 cut(s) 2401
TaqI TCGA 8 cut(s) 407, 495, 1015, 1505, 2188, 2285, 2388, 2425
TatI WGTACW 5 cut(s) 214, 282, 488, 1891, 2131
TauI GCSGC 1 cut(s) 2551
TfiI GAWTC 8 cut(s) 357, 944, 988, 1262, 1502, 1595, 1777, 1920
Tru1I TTAA 5 cut(s) 954, 984, 2091, 2325, 2378
Tru9I TTAA 5 cut(s) 954, 984, 2091, 2325, 2378
TscAI CASTG 3 cut(s) 269, 772, 1182
TseFI GTSAC 5 cut(s) 763, 994, 1532, 1543, 2170
TseI GCWGC 6 cut(s) 337, 340, 343, 871, 1296, 2419
Tsp45I GTSAC 5 cut(s) 763, 994, 1532, 1543, 2170
TspGWI ACGGA 3 cut(s) 369, 1999, 2028
TspRI CASTG 3 cut(s) 269, 772, 1182
Tth111I GACNNNGTC 1 cut(s) 157
Van91I CCANNNNNTGG 1 cut(s) 1656
VneI GTGCAC 2 cut(s) 350, 1197
VpaK11BI GGWCC 2 cut(s) 1348, 1407
XagI CCTNNNNNAGG 1 cut(s) 2165
XapI RAATTY 9 cut(s) 480, 523, 710, 740, 878, 959, 1010, 1808, 2227
XbaI TCTAGA 1 cut(s) 2053
XceI RCATGY 2 cut(s) 1799, 2262
XcmI CCANNNNNNNNNTGG 2 cut(s) 1177, 1731
XhoI CTCGAG 1 cut(s) 494
XmiI GTMKAC 1 cut(s) 43
XmnI GAANNNNTTC 2 cut(s) 948, 2020
XspI CTAG 5 cut(s) 122, 236, 486, 1841, 2054
ZrmI AGTACT 4 cut(s) 216, 490, 1893, 2133
Zsp2I ATGCAT 1 cut(s) 2360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.