Prupe.7G139100_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000039
Physical Location & Seq
Reverse (-)
15530637 .. 15533733
3097 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G139100.1

Sequence Viewer

Length: 2415 bp
ATGGATCCGGTTACTTTAGTTGTAGGGTCTGCTCTAGGAGCAGCATTTGAAATTCTGTTTTCTGCAGTTCTAAAAGCGAAGCCCACGGCTAAGATGTTTCAAACACACCTCAGAAATCTCAATATCACGCTAGACTCTTTACAACCACTGATTAGACAGATAGCACAATCTGCCAACCATTTTGTTTCCCTAGAGTGCCTAGAAAATTTTACAACAAAAATGGAGGAGGGCAAGAAGCTGGTTGAAGAATGCTGTGATGTGGGAATGTGGAACTGCATCAAACAGCGTGAATACAAAGACAAAATTCTGGCATTGGATGGCTCTCTTCAAAGACTCTTAAGTATACTGACAGTGCAGTTAGTAAGCCATCAAGTTATGCTGCTCAACCGAATTGATGGAAATGTTGTGGCACAAAATCAAAATCAATTTGGAGTTCGGTGTGCAGTACCTCCGCTTCCACTGGTTACTGTTGGCTTGAAGGAGCCTTTGGATGATCTGAAGATGAAGCTTCTTAAGGATGGACCGGTGTCAATATTTGTGCTCACGGCTCCTGGAGGATGCGGGAAAACCACTTTGGCAACAATGTTTTGTCATGATCAAGAAGTCAAAGATAAGTTCAAGGAAAATATCTTCTTTGCCACTGTTTCAAATAAGCTCAGCCACCTTATTGTTCAAGAACTATGGGAACATACGGGAATGCAGGCACCTGCTTTACCAAATGAAGAAATTGCATTTAAATGGCTGCAAAAGTTTGTGACGGAAAGAGGACAAAATCCTTTACTATTGGTCTTGGATGATGTTCAATCTGGATCAGAATCCCTACTTGACAAGTTTAATGAATTCAAAATGCCAAGTTACAAGGTTTTGGTGACATCAAGATATCAATTTCCAAAATTTGGTCGTCCAAATCCTCTAAAAACATTGAAAGATGAAGATGCAATGGATCTTTTTCGTCGTTCAGCATTCCTACCAAATACGAGCTCTAACATACCAGATGATATTCAGAATCAGATCGTAGAGTTGTGTAAGAGATTTCCACTTGCCATTACAGCAATCGGGGACTCACTTTGCAATCGACCTATAGAGATCTGGAGAAAAAGACTACTGGAATTGTCTAAAGGTTCTTCTATTCTTGAGTCAGACCGAAAGTTGCTTGTTTACCTCAAAAGTTGCTTGGATGACTTGGATAAAGGAATGACTACCGTCAAGGATTGTTTCATAGACCTTGGTGTATTTCCTCAAGACCAAATAATCCCTGTTACTGCCCTCCTTGATATGTGGGCAGAGTCATATGAGGGAGCTGAAGATTTTATGTCCATTGCAAACCTCTACGAGCTCACCACTCGCAATCTGGCCACTCTTGTAGTCACAAGGAATGAAGATGCGGATGGCTACTATAGTGAACATTTTGCTATCCAACATGGTATGCTTAGATCGCTATCAATCCATGAGAGTCATCAAGACCCGATCGGACAGAGACTGATCATAGACATACGTGGAGACAAGCTTCCAACGTGGTGGAAAGAGAATAAGCATAAAACGAAGAAGGCTCGATTAGTATCTATTTCAACTGATGGATTGCACTCACCAAAATGGCACAACATGCATCTACCAAAGGCAGAGGTTCTAGTTCTGAATTTTCAGACAGCGAACTATGTTTTACCCAAGTTCGTGAAGAGGATGTCCAAGTTGAAGGTTCTAATAGTCACAAATTATGGTTTCTTACAAGCTGACTTAAGTAATTTCAAGCTCTTGGGTTTTTTACCTGCTCTAAAGAGAATACGATTAGAGCGCATTTCAATTCCTTCCATAAGCAAGAGCGCCATGCAGTTGAAGTGTCTGCAGAACATATCTTTATTCATGTGCAGCATCGGTCAAGCTTTTAGCAACTGTCCCAGCCAAATTTTAGAGGCATTTCCAAATCTGGTGGAATTGAACATTGACTATTGCAATGATTTGGTGGAATTGCCTGCCAAGCTCTGTGAACTTTTCCACCTAAAGAAGCTCAGTATCACCAATTGTCATAAGCTATCTGCCTTGCCTGAAGAGATTGGAAAGCTGGTCAATTTGGAGGTATTAAGGTTAAGGTCCTCCACAGAGTTGGAAAGGCTTCCAGGCTCGATTAAGAACCTAAAAAAGTTAAGCTTTCTTGACATATTTAATTGTTTGAGCATTAAGAAGTTGCCTGAAGAGATTGGTGAAATGAGTGGTTTAAGAAAGATCAACATGGGACAATGCTCAAGACTGCAAGAGTTGCCTCAATCAGTTTTGAAACTTAAGGAGTTACGGGAAGTGATATGTGATGAAGAGACAGAAAACTTATGGGGGGAGCCTTTCAAATCCAGTCTCATAAACATAAACATAACAGTGGCAAAAGAACAACACAACCTTAATTGGCTCTACTACAAGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

805

Amino Acids

91.25

Weight (kDa)

8.1

Isoelectric Point (pI)

45.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 715
Acc36I ACCTGC 2 cut(s) 715, 1774
AccB1I GGYRCC 1 cut(s) 703
AccB7I CCANNNNNTGG 1 cut(s) 896
AccI GTMKAC 1 cut(s) 343
AciI CCGC 3 cut(s) 452, 561, 1385
AclWI GGATC 3 cut(s) 12, 817, 951
AcoI YGGCCR 1 cut(s) 1353
AcsI RAATTY 7 cut(s) 51, 205, 303, 839, 893, 1636, 1902
AcuI CTGAAG 4 cut(s) 518, 1323, 2064, 2208
AfaI GTAC 1 cut(s) 447
AfiI CCNNNNNNNGG 1 cut(s) 896
AflII CTTAAG 4 cut(s) 337, 512, 1735, 2276
AgeI ACCGGT 1 cut(s) 523
AjnI CCWGG 2 cut(s) 550, 2113
AjuI GAANNNNNNNTTGG 4 cut(s) 470, 502, 557, 589
Alw21I GWGCWC 3 cut(s) 543, 983, 1338
Alw26I GTCTC 4 cut(s) 1471, 1494, 2303, 2351
AlwI GGATC 3 cut(s) 12, 817, 951
AlwNI CAGNNNCTG 1 cut(s) 1480
AoxI GGCC 1 cut(s) 1353
ApeKI GCWGC 4 cut(s) 41, 379, 742, 1866
ApoI RAATTY 7 cut(s) 51, 205, 303, 839, 893, 1636, 1902
AsiGI ACCGGT 1 cut(s) 523
Asp700I GAANNNNTTC 1 cut(s) 2109
AspLEI GCGC 2 cut(s) 1794, 1823
AspS9I GGNCC 2 cut(s) 521, 2088
AsuHPI GGTGA 5 cut(s) 880, 1330, 1578, 2005, 2210
AvaII GGWCC 2 cut(s) 521, 2088
BalI TGGCCA 1 cut(s) 1355
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 703
BanII GRGCYC 2 cut(s) 983, 1338
BarI GAAGNNNNNNTAC 2 cut(s) 438, 470
Bbv12I GWGCWC 3 cut(s) 543, 983, 1338
BbvI GCAGC 4 cut(s) 53, 366, 729, 1878
BccI CCATC 6 cut(s) 311, 375, 389, 512, 1382, 1568
BceAI ACGGC 2 cut(s) 102, 561
BciT130I CCWGG 2 cut(s) 552, 2115
BclI TGATCA 2 cut(s) 595, 1482
BcoDI GTCTC 4 cut(s) 1471, 1494, 2303, 2351
BfaI CTAG 5 cut(s) 35, 131, 191, 200, 1628
BfmI CTRYAG 4 cut(s) 63, 1080, 1396, 1841
BfoI RGCGCY 1 cut(s) 1824
BfrI CTTAAG 4 cut(s) 337, 512, 1735, 2276
BfuAI ACCTGC 2 cut(s) 715, 1774
BglII AGATCT 1 cut(s) 1086
BisI GCNGC 4 cut(s) 42, 380, 743, 1867
BlpI GCTNAGC 1 cut(s) 656
BlsI GCNGC 4 cut(s) 43, 381, 744, 1868
Bme1390I CCNGG 2 cut(s) 552, 2115
Bme18I GGWCC 2 cut(s) 521, 2088
BmgT120I GGNCC 2 cut(s) 521, 2088
BmiI GGNNCC 5 cut(s) 6, 483, 549, 705, 2331
BmrFI CCNGG 2 cut(s) 552, 2115
BmsI GCATC 6 cut(s) 285, 548, 925, 1372, 1615, 1878
BoxI GACNNNNGTC 2 cut(s) 526, 1202
BpmI CTGGAG 2 cut(s) 573, 1111
Bpu1102I GCTNAGC 1 cut(s) 656
BpuEI CTTGAG 3 cut(s) 1154, 1224, 2224
BsaAI YACGTR 1 cut(s) 1496
BsaBI GATNNNNATC 3 cut(s) 814, 1438, 1558
BsaJI CCNNGG 2 cut(s) 84, 1225
BsaWI WCCGGW 2 cut(s) 7, 523
Bsc4I CCNNNNNNNGG 1 cut(s) 896
Bse118I RCCGGY 1 cut(s) 523
Bse1I ACTGG 3 cut(s) 465, 1110, 2343
Bse3DI GCAATG 3 cut(s) 945, 1317, 1957
Bse8I GATNNNNATC 3 cut(s) 814, 1438, 1558
BseBI CCWGG 2 cut(s) 552, 2115
BseDI CCNNGG 2 cut(s) 84, 1225
BseGI GGATG 8 cut(s) 322, 496, 523, 563, 799, 1183, 1393, 1686
BseJI GATNNNNATC 3 cut(s) 814, 1438, 1558
BseLI CCNNNNNNNGG 1 cut(s) 896
BseMI GCAATG 3 cut(s) 945, 1317, 1957
BseMII CTCAG 3 cut(s) 124, 670, 2020
BseNI ACTGG 3 cut(s) 465, 1110, 2343
BseRI GAGGAG 1 cut(s) 239
BseXI GCAGC 4 cut(s) 53, 366, 729, 1878
BseYI CCCAGC 1 cut(s) 1895
BsgI GTGCAG 3 cut(s) 374, 462, 1885
Bsh1285I CGRYCG 1 cut(s) 1470
BshFI GGCC 1 cut(s) 1355
BshNI GGYRCC 1 cut(s) 703
BshTI ACCGGT 1 cut(s) 523
BsiEI CGRYCG 1 cut(s) 1470
BsiHKAI GWGCWC 3 cut(s) 543, 983, 1338
BsiSI CCGG 2 cut(s) 8, 524
BslFI GGGAC 3 cut(s) 1073, 1878, 2244
BslI CCNNNNNNNGG 1 cut(s) 896
BsmAI GTCTC 4 cut(s) 1471, 1494, 2303, 2351
BsmFI GGGAC 3 cut(s) 1073, 1878, 2244
BsmI GAATGC 3 cut(s) 254, 702, 962
BsnI GGCC 1 cut(s) 1355
Bsp1286I GDGCHC 3 cut(s) 543, 983, 1338
Bsp1720I GCTNAGC 1 cut(s) 656
BspACI CCGC 3 cut(s) 452, 561, 1385
BspANI GGCC 1 cut(s) 1355
BspCNI CTCAG 3 cut(s) 123, 669, 2019
BspHI TCATGA 1 cut(s) 592
BspLI GGNNCC 5 cut(s) 6, 483, 549, 705, 2331
BspMAI CTGCAG 2 cut(s) 67, 1845
BspMI ACCTGC 2 cut(s) 715, 1774
BspPI GGATC 3 cut(s) 12, 817, 951
BspT107I GGYRCC 1 cut(s) 703
BspTI CTTAAG 4 cut(s) 337, 512, 1735, 2276
BsrDI GCAATG 3 cut(s) 945, 1317, 1957
BsrFI RCCGGY 1 cut(s) 523
BsrI ACTGG 3 cut(s) 465, 1110, 2343
BssAI RCCGGY 1 cut(s) 523
BssECI CCNNGG 2 cut(s) 84, 1225
BssNAI GTATAC 1 cut(s) 344
BssT1I CCWWGG 1 cut(s) 1225
Bst1107I GTATAC 1 cut(s) 344
Bst2UI CCWGG 2 cut(s) 552, 2115
Bst4CI ACNGT 6 cut(s) 352, 469, 643, 1204, 1892, 2368
Bst6I CTCTTC 5 cut(s) 330, 1670, 2040, 2184, 2301
BstAFI CTTAAG 4 cut(s) 337, 512, 1735, 2276
BstAPI GCANNNNNTGC 3 cut(s) 170, 1603, 2254
BstBAI YACGTR 1 cut(s) 1496
BstC8I GCNNGC 2 cut(s) 702, 1971
BstDEI CTNAG 5 cut(s) 90, 110, 656, 1430, 2006
BstDSI CCRYGG 1 cut(s) 84
BstF5I GGATG 8 cut(s) 322, 496, 523, 563, 799, 1183, 1393, 1686
BstH2I RGCGCY 1 cut(s) 1824
BstHHI GCGC 2 cut(s) 1794, 1823
BstMAI GTCTC 4 cut(s) 1471, 1494, 2303, 2351
BstMCI CGRYCG 1 cut(s) 1470
BstMWI GCNNNNNNNGC 7 cut(s) 38, 170, 1049, 1435, 1603, 1975, 2254
BstNI CCWGG 2 cut(s) 552, 2115
BstNSI RCATGY 1 cut(s) 1606
BstPAI GACNNNNGTC 2 cut(s) 526, 1202
BstSCI CCNGG 2 cut(s) 550, 2113
BstSFI CTRYAG 4 cut(s) 63, 1080, 1396, 1841
BstV1I GCAGC 4 cut(s) 53, 366, 729, 1878
BstX2I RGATCY 3 cut(s) 4, 943, 1086
BstXI CCANNNNNNTGG 2 cut(s) 1518, 2101
BstYI RGATCY 3 cut(s) 4, 943, 1086
BstZ17I GTATAC 1 cut(s) 344
BsuRI GGCC 1 cut(s) 1355
BtgI CCRYGG 1 cut(s) 84
BtsCI GGATG 8 cut(s) 322, 496, 523, 563, 799, 1183, 1393, 1686
BtsIMutI CAGTG 5 cut(s) 146, 357, 458, 639, 2373
BveI ACCTGC 2 cut(s) 715, 1774
Cac8I GCNNGC 2 cut(s) 702, 1971
CaiI CAGNNNCTG 1 cut(s) 1480
CciI TCATGA 1 cut(s) 592
CfoI GCGC 2 cut(s) 1794, 1823
Cfr10I RCCGGY 1 cut(s) 523
Cfr13I GGNCC 2 cut(s) 521, 2088
Csp6I GTAC 1 cut(s) 446
CspAI ACCGGT 1 cut(s) 523
CspCI CAANNNNNGTGG 2 cut(s) 1908, 1943
CviAII CATG 7 cut(s) 593, 1421, 1448, 1603, 1825, 1861, 2227
CviQI GTAC 1 cut(s) 446
DdeI CTNAG 5 cut(s) 90, 110, 656, 1430, 2006
DraI TTTAAA 1 cut(s) 736
EaeI YGGCCR 1 cut(s) 1353
Eam1104I CTCTTC 5 cut(s) 330, 1670, 2040, 2184, 2301
EarI CTCTTC 5 cut(s) 330, 1670, 2040, 2184, 2301
Ecl136II GAGCTC 2 cut(s) 981, 1336
Eco130I CCWWGG 1 cut(s) 1225
Eco24I GRGCYC 2 cut(s) 983, 1338
Eco32I GATATC 1 cut(s) 881
Eco47I GGWCC 2 cut(s) 521, 2088
Eco53kI GAGCTC 2 cut(s) 981, 1336
Eco57I CTGAAG 4 cut(s) 518, 1323, 2064, 2208
EcoICRI GAGCTC 2 cut(s) 981, 1336
EcoO109I RGGNCCY 1 cut(s) 2088
EcoRI GAATTC 1 cut(s) 839
EcoRII CCWGG 2 cut(s) 550, 2113
EcoRV GATATC 1 cut(s) 881
EcoT14I CCWWGG 1 cut(s) 1225
EcoT22I ATGCAT 1 cut(s) 1608
EcoT38I GRGCYC 2 cut(s) 983, 1338
ErhI CCWWGG 1 cut(s) 1225
FaeI CATG 7 cut(s) 596, 1424, 1451, 1606, 1828, 1864, 2230
FalI AAGNNNNNCTT 2 cut(s) 2129, 2161
FaqI GGGAC 3 cut(s) 1073, 1878, 2244
FatI CATG 7 cut(s) 592, 1420, 1447, 1602, 1824, 1860, 2226
FauI CCCGC 1 cut(s) 554
FauNDI CATATG 1 cut(s) 1291
FbaI TGATCA 2 cut(s) 595, 1482
FblI GTMKAC 1 cut(s) 343
Fnu4HI GCNGC 4 cut(s) 42, 380, 743, 1867
FokI GGATG 8 cut(s) 329, 503, 530, 570, 806, 1190, 1400, 1693
FriOI GRGCYC 2 cut(s) 983, 1338
Fsp4HI GCNGC 4 cut(s) 42, 380, 743, 1867
FspBI CTAG 5 cut(s) 35, 131, 191, 200, 1628
GlaI GCGC 2 cut(s) 1793, 1822
GluI GCNGC 4 cut(s) 42, 380, 743, 1867
GsaI CCCAGC 1 cut(s) 1899
GsuI CTGGAG 2 cut(s) 573, 1111
HaeII RGCGCY 1 cut(s) 1824
HaeIII GGCC 1 cut(s) 1355
HapII CCGG 2 cut(s) 8, 524
HhaI GCGC 2 cut(s) 1794, 1823
Hin1II CATG 7 cut(s) 596, 1424, 1451, 1606, 1828, 1864, 2230
Hin6I GCGC 2 cut(s) 1792, 1821
HinP1I GCGC 2 cut(s) 1792, 1821
HindIII AAGCTT 4 cut(s) 506, 1505, 1878, 2143
HinfI GANTC 8 cut(s) 134, 333, 815, 1006, 1061, 1136, 1286, 1453
HpaII CCGG 2 cut(s) 8, 524
HphI GGTGA 5 cut(s) 880, 1330, 1578, 2005, 2210
Hpy166II GTNNAC 4 cut(s) 344, 1159, 1403, 1985
Hpy188I TCNGA 9 cut(s) 113, 498, 814, 1005, 1011, 1141, 1472, 1635, 1644
Hpy8I GTNNAC 4 cut(s) 344, 1159, 1403, 1985
Hpy99I CGWCG 1 cut(s) 957
HpyAV CCTTC 4 cut(s) 472, 1540, 1687, 1815
HpyCH4III ACNGT 6 cut(s) 352, 469, 643, 1204, 1892, 2368
HpyCH4IV ACGT 2 cut(s) 1495, 1514
HpyF10VI GCNNNNNNNGC 7 cut(s) 38, 170, 1049, 1435, 1603, 1975, 2254
HpyF3I CTNAG 5 cut(s) 90, 110, 656, 1430, 2006
HpySE526I ACGT 2 cut(s) 1495, 1514
Hsp92II CATG 7 cut(s) 596, 1424, 1451, 1606, 1828, 1864, 2230
HspAI GCGC 2 cut(s) 1792, 1821
Ksp22I TGATCA 2 cut(s) 595, 1482
LmnI GCTCC 5 cut(s) 38, 481, 553, 1298, 2329
Lsp1109I GCAGC 4 cut(s) 53, 366, 729, 1878
LweI GCATC 6 cut(s) 285, 548, 925, 1372, 1615, 1878
MaeI CTAG 5 cut(s) 35, 131, 191, 200, 1628
MaeII ACGT 2 cut(s) 1495, 1514
MaeIII GTNAC 9 cut(s) 10, 463, 754, 854, 868, 1258, 1366, 1705, 2283
MfeI CAATTG 1 cut(s) 2017
MflI RGATCY 3 cut(s) 4, 943, 1086
MhlI GDGCHC 3 cut(s) 543, 983, 1338
MlsI TGGCCA 1 cut(s) 1355
MluNI TGGCCA 1 cut(s) 1355
MlyI GAGTC 6 cut(s) 128, 327, 1055, 1145, 1295, 1462
MmeI TCCRAC 3 cut(s) 1441, 1535, 2082
Mox20I TGGCCA 1 cut(s) 1355
Mph1103I ATGCAT 1 cut(s) 1608
MroXI GAANNNNTTC 1 cut(s) 2109
MscI TGGCCA 1 cut(s) 1355
MslI CAYNNNNRTG 3 cut(s) 736, 1591, 2366
Msp20I TGGCCA 1 cut(s) 1355
MspCI CTTAAG 4 cut(s) 337, 512, 1735, 2276
MspI CCGG 2 cut(s) 8, 524
MspR9I CCNGG 2 cut(s) 552, 2115
MunI CAATTG 1 cut(s) 2017
Mva1269I GAATGC 3 cut(s) 254, 702, 962
MvaI CCWGG 2 cut(s) 552, 2115
MwoI GCNNNNNNNGC 7 cut(s) 38, 170, 1049, 1435, 1603, 1975, 2254
NdeI CATATG 1 cut(s) 1291
NlaIII CATG 7 cut(s) 596, 1424, 1451, 1606, 1828, 1864, 2230
NlaIV GGNNCC 5 cut(s) 6, 483, 549, 705, 2331
NmuCI GTSAC 4 cut(s) 754, 868, 1366, 1705
NsiI ATGCAT 1 cut(s) 1608
NspI RCATGY 1 cut(s) 1606
PagI TCATGA 1 cut(s) 592
PaqCI CACCTGC 1 cut(s) 715
PctI GAATGC 3 cut(s) 254, 702, 962
PdmI GAANNNNTTC 1 cut(s) 2109
PfeI GAWTC 2 cut(s) 815, 1006
PflMI CCANNNNNTGG 1 cut(s) 896
PfoI TCCNGGA 1 cut(s) 550
PinAI ACCGGT 1 cut(s) 523
PkrI GCNGC 4 cut(s) 43, 381, 744, 1868
Ple19I CGATCG 1 cut(s) 1470
PleI GAGTC 6 cut(s) 128, 327, 1055, 1144, 1294, 1461
PpsI GAGTC 6 cut(s) 128, 327, 1055, 1144, 1294, 1461
Ppu21I YACGTR 1 cut(s) 1496
PpuMI RGGWCCY 1 cut(s) 2088
PshAI GACNNNNGTC 2 cut(s) 526, 1202
Psp124BI GAGCTC 2 cut(s) 983, 1338
Psp5II RGGWCCY 1 cut(s) 2088
Psp6I CCWGG 2 cut(s) 550, 2113
PspFI CCCAGC 1 cut(s) 1895
PspGI CCWGG 2 cut(s) 550, 2113
PspN4I GGNNCC 5 cut(s) 6, 483, 549, 705, 2331
PspPI GGNCC 2 cut(s) 521, 2088
PspPPI RGGWCCY 1 cut(s) 2088
PstI CTGCAG 2 cut(s) 67, 1845
PstNI CAGNNNCTG 1 cut(s) 1480
PsuI RGATCY 3 cut(s) 4, 943, 1086
PvuI CGATCG 1 cut(s) 1470
RsaI GTAC 1 cut(s) 447
RsaNI GTAC 1 cut(s) 446
RseI CAYNNNNRTG 3 cut(s) 736, 1591, 2366
SacI GAGCTC 2 cut(s) 983, 1338
SatI GCNGC 4 cut(s) 42, 380, 743, 1867
Sau96I GGNCC 2 cut(s) 521, 2088
SchI GAGTC 6 cut(s) 128, 327, 1055, 1145, 1295, 1462
ScrFI CCNGG 2 cut(s) 552, 2115
SduI GDGCHC 3 cut(s) 543, 983, 1338
SfaNI GCATC 6 cut(s) 285, 548, 925, 1372, 1615, 1878
SfcI CTRYAG 4 cut(s) 63, 1080, 1396, 1841
SinI GGWCC 2 cut(s) 521, 2088
SmiI ATTTAAAT 1 cut(s) 736
SmiMI CAYNNNNRTG 3 cut(s) 736, 1591, 2366
SmlI CTYRAG 7 cut(s) 337, 512, 1133, 1239, 1735, 2239, 2276
SmoI CTYRAG 7 cut(s) 337, 512, 1133, 1239, 1735, 2239, 2276
SsiI CCGC 3 cut(s) 452, 561, 1385
SspI AATATT 1 cut(s) 534
SspMI CTAG 5 cut(s) 35, 131, 191, 200, 1628
SstI GAGCTC 2 cut(s) 983, 1338
StyD4I CCNGG 2 cut(s) 550, 2113
StyI CCWWGG 1 cut(s) 1225
SwaI ATTTAAAT 1 cut(s) 736
TaaI ACNGT 6 cut(s) 352, 469, 643, 1204, 1892, 2368
TaiI ACGT 2 cut(s) 1498, 1517
TaqI TCGA 3 cut(s) 1075, 1552, 2120
TaqII GACCGA 2 cut(s) 1158, 1862
TfiI GAWTC 2 cut(s) 815, 1006
TscAI CASTG 5 cut(s) 153, 357, 465, 646, 2373
TseFI GTSAC 4 cut(s) 754, 868, 1366, 1705
TseI GCWGC 4 cut(s) 41, 379, 742, 1866
Tsp45I GTSAC 4 cut(s) 754, 868, 1366, 1705
TspDTI ATGAA 8 cut(s) 518, 735, 852, 945, 1207, 1392, 1849, 2319
TspGWI ACGGA 1 cut(s) 773
TspRI CASTG 5 cut(s) 153, 357, 465, 646, 2373
Van91I CCANNNNNTGG 1 cut(s) 896
Vha464I CTTAAG 4 cut(s) 337, 512, 1735, 2276
VpaK11BI GGWCC 2 cut(s) 521, 2088
XapI RAATTY 7 cut(s) 51, 205, 303, 839, 893, 1636, 1902
XceI RCATGY 1 cut(s) 1606
XcmI CCANNNNNNNNNTGG 1 cut(s) 1348
XmiI GTMKAC 1 cut(s) 343
XmnI GAANNNNTTC 1 cut(s) 2109
XspI CTAG 5 cut(s) 35, 131, 191, 200, 1628
Zsp2I ATGCAT 1 cut(s) 1608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.