Rmu_sc0002576.1_g000002

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002576.1
OG0000039
Physical Location & Seq
Forward (+)
1627 .. 5699
4073 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002576.1_g000002.1.cds

Sequence Viewer

Length: 2565 bp
atggttggtggaggtgatgtttttggtggggccgctggaggattgctgttcaatgttctctatgatgcgcttaaagagctcatcagcaagtctatgatatatagacctctcctccaaaacattctatctgcgctagactcatatggaccactgatcaagcagatagaagcaagcaatgaggaactgggtcttccaaaggaggaaatagaaaagttcaaagcacatatggagaagggcatagtgatagtccggaagtgctctaaggttcgcaagtggaacatctacaagaagtacaagtacgccaacaaacttcttggatgggatggtgctcttgtaagacagttggatgtactgaaggcgcagggagtaagggatgggaagaagaccttggtttcggtaaagcagatagagagggtggtcactgggattgaaacgagcagtatctttttagaggcaggggttgcccatattgcaacaaccagcaggcatatggagaaggcactcagcggagttgaaatgagaagtggagatatagtggaggggatgtaccgaattgaagaccgagttgaaacaagctgtagcattgtggaggcagggttcaagcggattgaagaccgacttgatacacgaaatggagctaaagttggagcttggtctgttgtgcctgaacttgcacagtttacggttggattggatgagcctttgaaggaattgaagatgaaactttttaaggatggagtctcgatgcttgtggtcactgcccccggaggatgtgggaaaactacactggcaacaaagttttgtcaagatgagcaagtgaaagagaaattcaagaataatatcttctttgtcactgtgtcaaacacaccaaacctgagccttattgtgcaagagttataccaacgcaagggttcccaggtgcctactttccaagatgaaataactgcaggcaagtggctgcaaacatttctgaaggaagaaggaaaaaaccctttactattagtcttggatgatgtttggtttggatcagaatccctactagacaagtttcagttcgagatgccagattacaagattttggtcacatcaagatctgaatttccgggatttggttccccatatcatttgcgatctttggattataacaatgccatgaaactttttcatcattcagcatccttgggagataaaagctcacatattccagcatacctctcgagacagatagtagagggctgtaagggatttccacttgcaattacggtggcaggaggatcactttgtggacaaagtatagagatctggcaagaaagactaattgaatggtccaaagggtcttccattcttgattctgagaccgaattgcttcttcgcctccaaagcagcttagttgtctcggataaagaaacggctatcatcagggagtgtttcttagaccttggttcattccctgaagaccaaagaatcccagttgctgccctcattgatatgtggacagagtcatatgatcagctagatgaagatactttgtgtgttgcaaagctccacaagctcaccaaccgaagtctggctaatcttgtagtcacacggaaggaccagagccagggggatggatactacagtgaacatttcgttactcagcatgatctgctcagagagttggctatctatgagacaagacaacaacacccaggacatagagaaagactgattctaaacataactggagacaatcttccaaaatggtggagtgagaagaagtatgaatctatgaaagctcgcctattatccatctcaactgatggaaatttctcatcaaaatggcaccacatggaactaccagaagctgaggttctagtcttgaattttcagacgaagaactacgccttacccaaatttgtggacactatgcataaactgaaggtacttgttgtcacaaattttggtttctcgcctgctgaattaagtaatatcccactactggtttcattatctcatctaaagagaattagattggagcgtgtctcaataccttcaataaccaagaaccccatacaattggtgggtctgaagaagatatctctattcatgtgtaccattggaaaagctttcagcgacggttccattcagatttcacacgcatttccaaacctagaggaaattagcattgactattgtaatgatttggcggagatgcctgttgacctctgtgatcttattcatctaaggaagctcagtgtcaccaactcacataagcttcttgccttgcctgaagagattggaaaactggaaaatttggaactgctgagactgaggtcatgtacagacttggcacaattgccaggctcgagcaggaacctaaagaagttgatctttcttgacatttcttattgctttagcatcaaggagttgcctgaagatattggtgaaatgagcagcttaagaaatataaaacctctatctcagggtgatcacgccaattttatagaactgtttcaatcaaaatctttgccggtgttagttattagtattatcgacagcaggaacatgatctctggtaattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

854

Amino Acids

95.99

Weight (kDa)

6.61

Isoelectric Point (pI)

45.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1143
AccB1I GGYRCC 2 cut(s) 919, 1824
AccIII TCCGGA 1 cut(s) 249
AciI CCGC 4 cut(s) 33, 507, 604, 2189
AclWI GGATC 2 cut(s) 1033, 1282
AcsI RAATTY 7 cut(s) 827, 1097, 1807, 1864, 1895, 1939, 2293
AcuI CTGAAG 7 cut(s) 374, 992, 1473, 1940, 2090, 2292, 2436
AdeI CACNNNGTG 1 cut(s) 1283
AfaI GTAC 7 cut(s) 293, 299, 351, 548, 1926, 2095, 2323
AfiI CCNNNNNNNGG 5 cut(s) 907, 1109, 1567, 1603, 1981
AflII CTTAAG 1 cut(s) 2440
AjnI CCWGG 4 cut(s) 915, 1602, 1690, 2341
AjuI GAANNNNNNNTTGG 2 cut(s) 371, 403
AloI GAACNNNNNNTCC 2 cut(s) 581, 613
Alw21I GWGCWC 3 cut(s) 81, 260, 331
Alw26I GTCTC 8 cut(s) 745, 1213, 1349, 1399, 1667, 1722, 2029, 2302
AlwI GGATC 2 cut(s) 1033, 1282
AlwNI CAGNNNCTG 2 cut(s) 1475, 1847
Ama87I CYCGRG 2 cut(s) 1216, 2347
Aor13HI TCCGGA 1 cut(s) 249
AoxI GGCC 1 cut(s) 30
ApeKI GCWGC 4 cut(s) 958, 1383, 1475, 2436
ApoI RAATTY 7 cut(s) 827, 1097, 1807, 1864, 1895, 1939, 2293
ArsI GACNNNNNNTTYG 2 cut(s) 376, 408
Asp700I GAANNNNTTC 2 cut(s) 1365, 2493
AspLEI GCGC 3 cut(s) 70, 133, 361
AspS9I GGNCC 4 cut(s) 30, 146, 1326, 1594
AsuC2I CCSGG 2 cut(s) 765, 1104
AsuHPI GGTGA 5 cut(s) 26, 1546, 2233, 2438, 2480
AvaI CYCGRG 2 cut(s) 1216, 2347
AvaII GGWCC 3 cut(s) 146, 1326, 1594
BaeI ACNNNNGTAYC 2 cut(s) 1606, 1639
BanI GGYRCC 2 cut(s) 919, 1824
BanII GRGCYC 1 cut(s) 81
BarI GAAGNNNNNNTAC 2 cut(s) 281, 313
BbsI GAAGAC 6 cut(s) 182, 389, 564, 618, 1329, 1461
Bbv12I GWGCWC 3 cut(s) 81, 260, 331
BbvCI CCTCAGC 1 cut(s) 1848
BbvI GCAGC 4 cut(s) 945, 1395, 1462, 2448
BccI CCATC 7 cut(s) 312, 317, 368, 728, 1604, 1796, 1799
BceAI ACGGC 1 cut(s) 1425
BcgI CGANNNNNNTGC 2 cut(s) 1197, 1231
BciT130I CCWGG 4 cut(s) 917, 1604, 1692, 2343
BciVI GTATCC 1 cut(s) 1607
BclI TGATCA 3 cut(s) 153, 1507, 2470
BcnI CCSGG 2 cut(s) 765, 1104
BcoDI GTCTC 8 cut(s) 745, 1213, 1349, 1399, 1667, 1722, 2029, 2302
BfaI CTAG 5 cut(s) 134, 1040, 1514, 1856, 2153
BfmI CTRYAG 3 cut(s) 577, 945, 1618
BfrI CTTAAG 1 cut(s) 2440
BfuI GTATCC 1 cut(s) 1607
BglII AGATCT 2 cut(s) 1091, 1299
BisI GCNGC 5 cut(s) 33, 959, 1384, 1476, 2437
BlsI GCNGC 5 cut(s) 34, 960, 1385, 1477, 2438
Bme1390I CCNGG 6 cut(s) 765, 917, 1104, 1604, 1692, 2343
Bme18I GGWCC 3 cut(s) 146, 1326, 1594
BmeT110I CYCGRG 2 cut(s) 1216, 2347
BmgT120I GGNCC 4 cut(s) 30, 146, 1326, 1594
BmiI GGNNCC 7 cut(s) 31, 913, 921, 1114, 1826, 2122, 2357
BmrFI CCNGG 6 cut(s) 765, 917, 1104, 1604, 1692, 2343
BmrI ACTGGG 3 cut(s) 194, 432, 1463
BmsI GCATC 6 cut(s) 55, 735, 1050, 1184, 2184, 2409
BmuI ACTGGG 3 cut(s) 194, 432, 1463
BoxI GACNNNNGTC 1 cut(s) 2314
BpiI GAAGAC 6 cut(s) 182, 389, 564, 618, 1329, 1461
BplI GAGNNNNNCTC 2 cut(s) 2009, 2041
BpmI CTGGAG 2 cut(s) 57, 1746
Bpu10I CCTNAGC 2 cut(s) 875, 1848
BpuMI CCSGG 2 cut(s) 765, 1104
BsaBI GATNNNNATC 1 cut(s) 1030
BsaI GGTCTC 1 cut(s) 1349
BsaJI CCNNGG 7 cut(s) 387, 763, 915, 1179, 1438, 1603, 1690
BsaWI WCCGGW 1 cut(s) 249
Bsc4I CCNNNNNNNGG 5 cut(s) 907, 1109, 1567, 1603, 1981
Bse118I RCCGGY 1 cut(s) 2512
Bse1I ACTGG 7 cut(s) 189, 427, 792, 1469, 1729, 1986, 2292
Bse3DI GCAATG 1 cut(s) 181
Bse8I GATNNNNATC 1 cut(s) 1030
BseAI TCCGGA 1 cut(s) 249
BseBI CCWGG 4 cut(s) 917, 1604, 1692, 2343
BseDI CCNNGG 7 cut(s) 387, 763, 915, 1179, 1438, 1603, 1690
BseJI GATNNNNATC 1 cut(s) 1030
BseLI CCNNNNNNNGG 5 cut(s) 907, 1109, 1567, 1603, 1981
BseMI GCAATG 1 cut(s) 181
BseNI ACTGG 7 cut(s) 189, 427, 792, 1469, 1729, 1986, 2292
BseRI GAGGAG 1 cut(s) 101
BseXI GCAGC 4 cut(s) 945, 1395, 1462, 2448
BshFI GGCC 1 cut(s) 32
BshNI GGYRCC 2 cut(s) 919, 1824
BsiHKAI GWGCWC 3 cut(s) 81, 260, 331
BsiHKCI CYCGRG 2 cut(s) 1216, 2347
BsiSI CCGG 4 cut(s) 250, 765, 1103, 2513
BslI CCNNNNNNNGG 5 cut(s) 907, 1109, 1567, 1603, 1981
BsmAI GTCTC 8 cut(s) 745, 1213, 1349, 1399, 1667, 1722, 2029, 2302
BsnI GGCC 1 cut(s) 32
Bso31I GGTCTC 1 cut(s) 1349
BsoBI CYCGRG 2 cut(s) 1216, 2347
Bsp1286I GDGCHC 3 cut(s) 81, 260, 331
Bsp13I TCCGGA 1 cut(s) 249
Bsp1407I TGTACA 1 cut(s) 2321
BspACI CCGC 4 cut(s) 33, 507, 604, 2189
BspANI GGCC 1 cut(s) 32
BspEI TCCGGA 1 cut(s) 249
BspLI GGNNCC 7 cut(s) 31, 913, 921, 1114, 1826, 2122, 2357
BspMAI CTGCAG 1 cut(s) 949
BspPI GGATC 2 cut(s) 1033, 1282
BspT107I GGYRCC 2 cut(s) 919, 1824
BspTI CTTAAG 1 cut(s) 2440
BspTNI GGTCTC 1 cut(s) 1349
BsrDI GCAATG 1 cut(s) 181
BsrFI RCCGGY 1 cut(s) 2512
BsrGI TGTACA 1 cut(s) 2321
BsrI ACTGG 7 cut(s) 189, 427, 792, 1469, 1729, 1986, 2292
BssAI RCCGGY 1 cut(s) 2512
BssECI CCNNGG 7 cut(s) 387, 763, 915, 1179, 1438, 1603, 1690
BssT1I CCWWGG 3 cut(s) 387, 1179, 1438
Bst2UI CCWGG 4 cut(s) 917, 1604, 1692, 2343
Bst4CI ACNGT 8 cut(s) 342, 678, 685, 856, 1264, 1622, 2120, 2493
Bst6I CTCTTC 1 cut(s) 2268
BstAFI CTTAAG 1 cut(s) 2440
BstAPI GCANNNNNTGC 2 cut(s) 461, 1648
BstAUI TGTACA 1 cut(s) 2321
BstC8I GCNNGC 5 cut(s) 172, 485, 949, 1780, 1956
BstHHI GCGC 3 cut(s) 70, 133, 361
BstMAI GTCTC 8 cut(s) 745, 1213, 1349, 1399, 1667, 1722, 2029, 2302
BstMWI GCNNNNNNNGC 6 cut(s) 76, 461, 470, 1380, 1549, 1648
BstNI CCWGG 4 cut(s) 917, 1604, 1692, 2343
BstPAI GACNNNNGTC 1 cut(s) 2314
BstSCI CCNGG 6 cut(s) 763, 915, 1102, 1602, 1690, 2341
BstSFI CTRYAG 3 cut(s) 577, 945, 1618
BstV1I GCAGC 4 cut(s) 945, 1395, 1462, 2448
BstV2I GAAGAC 6 cut(s) 182, 389, 564, 618, 1329, 1461
BstX2I RGATCY 2 cut(s) 1091, 1299
BstXI CCANNNNNNTGG 4 cut(s) 1610, 1746, 1900, 2059
BstYI RGATCY 2 cut(s) 1091, 1299
BsuI GTATCC 1 cut(s) 1607
BsuRI GGCC 1 cut(s) 32
BtsI GCAGTG 1 cut(s) 756
BtsIMutI CAGTG 7 cut(s) 149, 420, 756, 785, 852, 1627, 2242
Cac8I GCNNGC 5 cut(s) 172, 485, 949, 1780, 1956
CaiI CAGNNNCTG 2 cut(s) 1475, 1847
CfoI GCGC 3 cut(s) 70, 133, 361
Cfr10I RCCGGY 1 cut(s) 2512
Cfr13I GGNCC 4 cut(s) 30, 146, 1326, 1594
Csp6I GTAC 7 cut(s) 292, 298, 350, 547, 1925, 2094, 2322
CspCI CAANNNNNGTGG 2 cut(s) 1245, 1280
CviAII CATG 6 cut(s) 1153, 1643, 1831, 2089, 2319, 2548
CviQI GTAC 7 cut(s) 292, 298, 350, 547, 1925, 2094, 2322
DraIII CACNNNGTG 1 cut(s) 1283
Eam1104I CTCTTC 1 cut(s) 2268
EarI CTCTTC 1 cut(s) 2268
EciI GGCGGA 1 cut(s) 2204
Ecl136II GAGCTC 1 cut(s) 79
Eco130I CCWWGG 3 cut(s) 387, 1179, 1438
Eco24I GRGCYC 1 cut(s) 81
Eco31I GGTCTC 1 cut(s) 1349
Eco32I GATATC 1 cut(s) 2079
Eco47I GGWCC 3 cut(s) 146, 1326, 1594
Eco53kI GAGCTC 1 cut(s) 79
Eco57I CTGAAG 7 cut(s) 374, 992, 1473, 1940, 2090, 2292, 2436
Eco88I CYCGRG 2 cut(s) 1216, 2347
EcoICRI GAGCTC 1 cut(s) 79
EcoRII CCWGG 4 cut(s) 915, 1602, 1690, 2341
EcoRV GATATC 1 cut(s) 2079
EcoT14I CCWWGG 3 cut(s) 387, 1179, 1438
EcoT22I ATGCAT 1 cut(s) 1914
EcoT38I GRGCYC 1 cut(s) 81
ErhI CCWWGG 3 cut(s) 387, 1179, 1438
FaeI CATG 6 cut(s) 1156, 1646, 1834, 2092, 2322, 2551
FalI AAGNNNNNCTT 6 cut(s) 371, 403, 603, 635, 2357, 2389
FatI CATG 6 cut(s) 1152, 1642, 1830, 2088, 2318, 2547
FauNDI CATATG 4 cut(s) 142, 225, 489, 1504
FbaI TGATCA 3 cut(s) 153, 1507, 2470
Fnu4HI GCNGC 5 cut(s) 33, 959, 1384, 1476, 2437
FriOI GRGCYC 1 cut(s) 81
Fsp4HI GCNGC 5 cut(s) 33, 959, 1384, 1476, 2437
FspBI CTAG 5 cut(s) 134, 1040, 1514, 1856, 2153
GlaI GCGC 3 cut(s) 69, 132, 360
GluI GCNGC 5 cut(s) 33, 959, 1384, 1476, 2437
GsuI CTGGAG 2 cut(s) 57, 1746
HaeIII GGCC 1 cut(s) 32
HapII CCGG 4 cut(s) 250, 765, 1103, 2513
HhaI GCGC 3 cut(s) 70, 133, 361
Hin1II CATG 6 cut(s) 1156, 1646, 1834, 2092, 2322, 2551
Hin6I GCGC 3 cut(s) 68, 131, 359
HinP1I GCGC 3 cut(s) 68, 131, 359
HincII GTYRAC 1 cut(s) 2203
HindII GTYRAC 1 cut(s) 2203
HindIII AAGCTT 2 cut(s) 2106, 2255
HinfI GANTC 8 cut(s) 137, 738, 1031, 1349, 1464, 1499, 1711, 1766
HpaII CCGG 4 cut(s) 250, 765, 1103, 2513
HphI GGTGA 5 cut(s) 26, 1546, 2233, 2438, 2480
Hpy166II GTNNAC 7 cut(s) 681, 1286, 1494, 1625, 1903, 2094, 2203
Hpy188I TCNGA 9 cut(s) 972, 1030, 1096, 1354, 1399, 1655, 1872, 2070, 2130
Hpy8I GTNNAC 7 cut(s) 681, 1286, 1494, 1625, 1903, 2094, 2203
Hpy99I CGWCG 1 cut(s) 2120
HpyAV CCTTC 9 cut(s) 226, 349, 490, 700, 967, 974, 1585, 1915, 2043
HpyCH4III ACNGT 8 cut(s) 342, 678, 685, 856, 1264, 1622, 2120, 2493
HpyCH4V TGCA 8 cut(s) 473, 674, 889, 947, 961, 1256, 1538, 1912
HpyF10VI GCNNNNNNNGC 6 cut(s) 76, 461, 470, 1380, 1549, 1648
Hsp92II CATG 6 cut(s) 1156, 1646, 1834, 2092, 2322, 2551
HspAI GCGC 3 cut(s) 68, 131, 359
Kpn2I TCCGGA 1 cut(s) 249
Ksp22I TGATCA 3 cut(s) 153, 1507, 2470
LmnI GCTCC 4 cut(s) 635, 647, 1548, 2017
Lsp1109I GCAGC 4 cut(s) 945, 1395, 1462, 2448
LweI GCATC 6 cut(s) 55, 735, 1050, 1184, 2184, 2409
MaeI CTAG 5 cut(s) 134, 1040, 1514, 1856, 2153
MaeIII GTNAC 8 cut(s) 418, 754, 850, 1081, 1582, 1633, 1933, 2239
MfeI CAATTG 2 cut(s) 2057, 2336
MflI RGATCY 2 cut(s) 1091, 1299
MhlI GDGCHC 3 cut(s) 81, 260, 331
MlyI GAGTC 3 cut(s) 131, 747, 1508
MmeI TCCRAC 3 cut(s) 324, 625, 667
Mph1103I ATGCAT 1 cut(s) 1914
MroI TCCGGA 1 cut(s) 249
MroXI GAANNNNTTC 2 cut(s) 1365, 2493
MseI TTAA 4 cut(s) 72, 729, 1964, 2441
MslI CAYNNNNRTG 2 cut(s) 1487, 1819
MspA1I CMGCKG 2 cut(s) 35, 507
MspCI CTTAAG 1 cut(s) 2440
MspI CCGG 4 cut(s) 250, 765, 1103, 2513
MspR9I CCNGG 6 cut(s) 765, 917, 1104, 1604, 1692, 2343
MunI CAATTG 2 cut(s) 2057, 2336
MvaI CCWGG 4 cut(s) 917, 1604, 1692, 2343
MwoI GCNNNNNNNGC 6 cut(s) 76, 461, 470, 1380, 1549, 1648
NciI CCSGG 2 cut(s) 765, 1104
NdeI CATATG 4 cut(s) 142, 225, 489, 1504
NlaIII CATG 6 cut(s) 1156, 1646, 1834, 2092, 2322, 2551
NlaIV GGNNCC 7 cut(s) 31, 913, 921, 1114, 1826, 2122, 2357
NmuCI GTSAC 7 cut(s) 418, 754, 850, 1081, 1582, 1933, 2239
NsiI ATGCAT 1 cut(s) 1914
PaeR7I CTCGAG 2 cut(s) 1216, 2347
PdmI GAANNNNTTC 2 cut(s) 1365, 2493
PfeI GAWTC 5 cut(s) 1031, 1349, 1464, 1711, 1766
PflFI GACNNNGTC 1 cut(s) 1498
PfoI TCCNGGA 1 cut(s) 1102
PkrI GCNGC 5 cut(s) 34, 960, 1385, 1477, 2438
PleI GAGTC 3 cut(s) 131, 746, 1507
PpsI GAGTC 3 cut(s) 131, 746, 1507
PshAI GACNNNNGTC 1 cut(s) 2314
PsiI TTATAA 1 cut(s) 1143
Psp124BI GAGCTC 1 cut(s) 81
Psp6I CCWGG 4 cut(s) 915, 1602, 1690, 2341
PspGI CCWGG 4 cut(s) 915, 1602, 1690, 2341
PspN4I GGNNCC 7 cut(s) 31, 913, 921, 1114, 1826, 2122, 2357
PspPI GGNCC 4 cut(s) 30, 146, 1326, 1594
PspXI VCTCGAGB 1 cut(s) 2347
PstI CTGCAG 1 cut(s) 949
PstNI CAGNNNCTG 2 cut(s) 1475, 1847
PsuI RGATCY 2 cut(s) 1091, 1299
PsyI GACNNNGTC 1 cut(s) 1498
RsaI GTAC 7 cut(s) 293, 299, 351, 548, 1926, 2095, 2323
RsaNI GTAC 7 cut(s) 292, 298, 350, 547, 1925, 2094, 2322
RseI CAYNNNNRTG 2 cut(s) 1487, 1819
SacI GAGCTC 1 cut(s) 81
SaqAI TTAA 4 cut(s) 72, 729, 1964, 2441
SatI GCNGC 5 cut(s) 33, 959, 1384, 1476, 2437
Sau96I GGNCC 4 cut(s) 30, 146, 1326, 1594
SchI GAGTC 3 cut(s) 131, 747, 1508
ScrFI CCNGG 6 cut(s) 765, 917, 1104, 1604, 1692, 2343
SduI GDGCHC 3 cut(s) 81, 260, 331
SfaNI GCATC 6 cut(s) 55, 735, 1050, 1184, 2184, 2409
SfcI CTRYAG 3 cut(s) 577, 945, 1618
Sfr274I CTCGAG 2 cut(s) 1216, 2347
SinI GGWCC 3 cut(s) 146, 1326, 1594
SlaI CTCGAG 2 cut(s) 1216, 2347
SmiMI CAYNNNNRTG 2 cut(s) 1487, 1819
SmlI CTYRAG 3 cut(s) 1216, 2347, 2440
SmoI CTYRAG 3 cut(s) 1216, 2347, 2440
SsiI CCGC 4 cut(s) 33, 507, 604, 2189
SspMI CTAG 5 cut(s) 134, 1040, 1514, 1856, 2153
SstI GAGCTC 1 cut(s) 81
StyD4I CCNGG 6 cut(s) 763, 915, 1102, 1602, 1690, 2341
StyI CCWWGG 3 cut(s) 387, 1179, 1438
TaaI ACNGT 8 cut(s) 342, 678, 685, 856, 1264, 1622, 2120, 2493
TaqI TCGA 5 cut(s) 743, 1056, 1217, 2348, 2535
TaqII GACCGA 3 cut(s) 576, 630, 1373
TatI WGTACW 3 cut(s) 291, 349, 2321
TauI GCSGC 1 cut(s) 35
TfiI GAWTC 5 cut(s) 1031, 1349, 1464, 1711, 1766
Tru1I TTAA 4 cut(s) 72, 729, 1964, 2441
Tru9I TTAA 4 cut(s) 72, 729, 1964, 2441
TscAI CASTG 7 cut(s) 156, 427, 763, 792, 859, 1627, 2242
TseFI GTSAC 7 cut(s) 418, 754, 850, 1081, 1582, 1933, 2239
TseI GCWGC 4 cut(s) 958, 1383, 1475, 2436
Tsp45I GTSAC 7 cut(s) 418, 754, 850, 1081, 1582, 1933, 2239
TspGWI ACGGA 1 cut(s) 1603
TspRI CASTG 7 cut(s) 156, 427, 763, 792, 859, 1627, 2242
Tth111I GACNNNGTC 1 cut(s) 1498
Vha464I CTTAAG 1 cut(s) 2440
VpaK11BI GGWCC 3 cut(s) 146, 1326, 1594
XapI RAATTY 7 cut(s) 827, 1097, 1807, 1864, 1895, 1939, 2293
XcmI CCANNNNNNNNNTGG 3 cut(s) 487, 1564, 2059
XhoI CTCGAG 2 cut(s) 1216, 2347
XmnI GAANNNNTTC 2 cut(s) 1365, 2493
XspI CTAG 5 cut(s) 134, 1040, 1514, 1856, 2153
Zsp2I ATGCAT 1 cut(s) 1914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.