MD00G1053700.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
10025118 .. 10028320
3203 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1053700.v1.1.491

Sequence Viewer

Length: 2364 bp
ATGTTTAAGCCCCTACTCAAAAACATCAAATTCAGGTTAGACTCTTTGGAACCATTGTTGAAAGATATAGAAAGATCCAACAAGAAATTGGACCTGTCGGATAAGGAACTGAGAAACTTGAAACTACATTTGGAGGAGGGCATACATCTCGTCCAAAAGTGCAAAAAGATTCGATGGTGGAGCGTATTAGTATACAAAAGGTACAAGTACGCCAACAAGCTGATTGAATGGGATGCATCTCTTCAACGACTTTTGGACATGCTAAAAGTTCAGGGAATAAGGGATGTGAAGGACAACGCGGTTACGGTGAAGAATGTAGAGGAGGCGGTCATCAGAATTGAATCGAATATGGTGATACCAAAACAACCCGACAGTGAAGCTTGGTGTGCCGTACCTCAACTTCCGCCGCTCGTGGTTGGATTGGATTTTCCTCTAAAGGAACTGAAGAGGAAGCTTCTAAAGGACAAAAATGTGTCAATGGTTGTGCTGACTGCTCCTGGAGGATGTGGGAAAACCACTTTGGCTACAAAGTTTTGTCAAGACAAGGATATCAAAGATGCATTCAAGGATAACATCTTCTTTGTCACGGTTTCAAAAAAGCCTAAATTAGAAAATATTGTTCAAGATCTTTATCAACGCAAGGGTTTCCAAGCACCTACTTTCCAAAACGAAGTTAGTACAGCGACGTGGCTGCAACGTTTTCTGAAGGAAGAAGGGCAGAATCCTTTACTGATTGTCCTGGATGATGTTTGGCCTGGATCAGAATCCCTTGTGGAGAAGTTTGATCAATTCAAAACGGAAAATTACAAGTTTTTGGTGACATCTAGGTCTGAATTTCGGGGATATGGTTCCCCTTATTATTTGCAATCATTGGATCATGACAATGCGATGAAACTTTTTCATCATTCAGCATCCCTTGGAGATAAGAGCTCTCATATTCCAAAAGATCTTCCAGAAAAGATAGTTGAGCGTTGCAAGGGATTTCCACTTGCTATTACAGTGGTGGGGAGATCGCTTAGTGGGGAGCCTATAGAGATATGGCAAAAAAGAGAACTTGAATTGTCTAAAGGTTTTTCTATTCTTGATTCAGAGACTGAATTGCTGCTCTGCCTTGAACGAAGCTTGGATGCCTTAGATAAAGAAATCATCAAGGAATGTTTCTTAGACTTAGGTTCATTTCCAGAAGACCAAAGAATCGCTGCAGCTGCCCTTGTTGATATCTGGGCAGAGTTATATGATGTAGATACAGATATAGAGTGCATTGCAAACATCTACGAGCTCACCAAACGAAGTCTAGCTAATCTTGTTGTCACAAGGAAGGACAAGATGGAGGGGGACGGGTATTATAGTGAGCACTTTGTTACCCAGCATGATGTTCTTAGGGAACTGGCCATCTATGACACAAAAAAAGGACCGGTAGAACATAGAAAAAGACTGATTATTGACATATGTGGAGACAAACTTCCAAAATGGTGGAGAGAACAGAAGCAGATGAAGGCCCGCTTATTATCTATAACAACTGATGAAGGGTTTTCAACAAAATGGCACAACTTGCAAATGCCAGAAGCTGAGGTTTTAGTATTGAATTTACAGACAAAGAACTATGCTTTACCCGATTCCGTGGTGAACATGGGTGAATTGAAGGCTGTGATAGTCACAAATTATGGTTTCTTACCAGCTGAATTGAGTAACTTCCAACTTTTGAGTTCATTACCAAATCTTAAGAGAATTAGATTAGAACGCATCTCAATTCCTTCCATAACCAAGAATCCCATTCAATTGGTGAGTCTGAAGAAGATATCCATGTTCATGTGTAACATTGGTCAAGCTTTCAACAACTGTTCCATCTCAATCTCATCAGCATTCCCGAATCTAGAGGAAATGAACATCGACTATTGCAGTGATTTAATTGAATTGCCCGTGGAGGTTTGTGATCTTAGTAAACTAAGGAAGCTCAATGTTACTAACTGTCATAAGCTATCTGCCTTGCCTGAAGAGATTGGAAAGTTGGAAAATTTAGAACTGTTGAGGCTAAGATCCTGCTCAGAACTGTCGAAGCTTCCAACCTCAATGAAGAACCTTGGAAAGGCAAACTTTCTTGACATATCTGATTGCTTCAGCATCAAGGTGTTGCCCGAAGACATTGGTGAAATGAGTAGTTTAAGAAAGATCAACATGAGACAATGCTCAAGGTTGCAAGAGCTGCCTCCATCAGTCATGGATCTTGAGCAGTTAGAGGAAGTGGTCTGTGATGAAGAGACAAAATATTTATGGGAAGCCTTCTCACCGTTTCTCAGCAACGTAAGGATAACTGTGGCCAAAGAGAATATGAACCTAAATTGGCTCCACAAGACTCGGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

788

Amino Acids

90.43

Weight (kDa)

6.69

Isoelectric Point (pI)

45.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 1 - 107 2.3e-17 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 145 - 303 2e-16 NB-ARC domain
LRR_14 PF23598 620 - 747 2e-12 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 826
AccBSI CCGCTC 1 cut(s) 409
AccI GTMKAC 1 cut(s) 192
AccII CGCG 1 cut(s) 299
AciI CCGC 5 cut(s) 299, 326, 404, 407, 1501
AclI AACGTT 1 cut(s) 697
AclWI GGATC 5 cut(s) 69, 766, 882, 2031, 2229
AcoI YGGCCR 2 cut(s) 1389, 2316
AcsI RAATTY 4 cut(s) 29, 833, 1585, 2014
AcuI CTGAAG 5 cut(s) 464, 725, 1811, 2013, 2101
AfaI GTAC 4 cut(s) 203, 209, 393, 679
AfiI CCNNNNNNNGG 1 cut(s) 2086
AflII CTTAAG 1 cut(s) 1721
AgeI ACCGGT 1 cut(s) 1414
AjiI CACGTC 1 cut(s) 687
AjnI CCWGG 3 cut(s) 496, 738, 754
AjuI GAANNNNNNNTTGG 4 cut(s) 113, 145, 503, 535
Alw21I GWGCWC 3 cut(s) 932, 1281, 1356
Alw26I GTCTC 4 cut(s) 1085, 1449, 2173, 2252
AlwI GGATC 5 cut(s) 69, 766, 882, 2031, 2229
AlwNI CAGNNNCTG 2 cut(s) 1094, 1568
AoxI GGCC 4 cut(s) 752, 1389, 1497, 2316
ApeKI GCWGC 6 cut(s) 691, 1102, 1199, 1202, 1205, 2203
ApoI RAATTY 4 cut(s) 29, 833, 1585, 2014
AsiGI ACCGGT 1 cut(s) 1414
AspS9I GGNCC 3 cut(s) 91, 1412, 1498
AsuHPI GGTGA 9 cut(s) 319, 364, 829, 1273, 1636, 1646, 1795, 2159, 2277
AvaII GGWCC 2 cut(s) 91, 1412
BalI TGGCCA 2 cut(s) 1391, 2318
BanII GRGCYC 2 cut(s) 932, 1281
BarI GAAGNNNNNNTAC 2 cut(s) 384, 416
BauI CACGAG 1 cut(s) 410
BbsI GAAGAC 2 cut(s) 1191, 2145
Bbv12I GWGCWC 3 cut(s) 932, 1281, 1356
BbvCI CCTCAGC 1 cut(s) 1569
BbvI GCAGC 6 cut(s) 678, 1089, 1186, 1192, 1214, 2190
BccI CCATC 5 cut(s) 168, 1321, 1400, 1853, 2218
BceAI ACGGC 1 cut(s) 374
BcgI CGANNNNNNTGC 4 cut(s) 130, 164, 673, 707
BciT130I CCWGG 3 cut(s) 498, 740, 756
BclI TGATCA 1 cut(s) 784
BcoDI GTCTC 4 cut(s) 1085, 1449, 2173, 2252
BfaI CTAG 3 cut(s) 825, 1295, 1874
BfmI CTRYAG 2 cut(s) 1029, 1200
BfrI CTTAAG 1 cut(s) 1721
BglII AGATCT 2 cut(s) 625, 946
BisI GCNGC 7 cut(s) 407, 692, 1103, 1200, 1203, 1206, 2204
BlsI GCNGC 7 cut(s) 408, 693, 1104, 1201, 1204, 1207, 2205
Bme1390I CCNGG 3 cut(s) 498, 740, 756
Bme18I GGWCC 2 cut(s) 91, 1412
BmgBI CACGTC 1 cut(s) 687
BmgT120I GGNCC 3 cut(s) 91, 1412, 1498
BmiI GGNNCC 4 cut(s) 51, 850, 1026, 2345
BmrFI CCNGG 3 cut(s) 498, 740, 756
BmsI GCATC 7 cut(s) 223, 245, 547, 920, 1117, 1752, 2130
BpiI GAAGAC 2 cut(s) 1191, 2145
BpmI CTGGAG 1 cut(s) 519
Bpu10I CCTNAGC 1 cut(s) 1569
BpuEI CTTGAG 2 cut(s) 2173, 2246
BsaBI GATNNNNATC 2 cut(s) 630, 763
BsaJI CCNNGG 4 cut(s) 916, 1620, 1920, 2080
BsaWI WCCGGW 1 cut(s) 1414
Bsc4I CCNNNNNNNGG 1 cut(s) 2086
Bse118I RCCGGY 1 cut(s) 1414
Bse1I ACTGG 1 cut(s) 1392
Bse3DI GCAATG 1 cut(s) 1260
Bse8I GATNNNNATC 2 cut(s) 630, 763
BseBI CCWGG 3 cut(s) 498, 740, 756
BseDI CCNNGG 4 cut(s) 916, 1620, 1920, 2080
BseGI GGATG 6 cut(s) 238, 289, 509, 748, 911, 1132
BseJI GATNNNNATC 2 cut(s) 630, 763
BseLI CCNNNNNNNGG 1 cut(s) 2086
BseMI GCAATG 1 cut(s) 1260
BseMII CTCAG 4 cut(s) 101, 1560, 2058, 2308
BseNI ACTGG 1 cut(s) 1392
BseRI GAGGAG 2 cut(s) 149, 335
BseXI GCAGC 6 cut(s) 678, 1089, 1186, 1192, 1214, 2190
BseYI CCCAGC 1 cut(s) 1365
Bsh1236I CGCG 1 cut(s) 299
BshFI GGCC 4 cut(s) 754, 1391, 1499, 2318
BshTI ACCGGT 1 cut(s) 1414
BsiHKAI GWGCWC 3 cut(s) 932, 1281, 1356
BsiSI CCGG 1 cut(s) 1415
BslFI GGGAC 1 cut(s) 1349
BslI CCNNNNNNNGG 1 cut(s) 2086
BsmAI GTCTC 4 cut(s) 1085, 1449, 2173, 2252
BsmFI GGGAC 1 cut(s) 1349
BsmI GAATGC 2 cut(s) 560, 1862
BsnI GGCC 4 cut(s) 754, 1391, 1499, 2318
Bsp1286I GDGCHC 3 cut(s) 932, 1281, 1356
BspACI CCGC 5 cut(s) 299, 326, 404, 407, 1501
BspANI GGCC 4 cut(s) 754, 1391, 1499, 2318
BspCNI CTCAG 4 cut(s) 102, 1561, 2057, 2307
BspFNI CGCG 1 cut(s) 299
BspHI TCATGA 1 cut(s) 877
BspLI GGNNCC 4 cut(s) 51, 850, 1026, 2345
BspMAI CTGCAG 1 cut(s) 1204
BspPI GGATC 5 cut(s) 69, 766, 882, 2031, 2229
BspTI CTTAAG 1 cut(s) 1721
BsrBI CCGCTC 1 cut(s) 409
BsrDI GCAATG 1 cut(s) 1260
BsrFI RCCGGY 1 cut(s) 1414
BsrI ACTGG 1 cut(s) 1392
BssAI RCCGGY 1 cut(s) 1414
BssECI CCNNGG 4 cut(s) 916, 1620, 1920, 2080
BssNAI GTATAC 1 cut(s) 193
BssSI CACGAG 1 cut(s) 410
BssT1I CCWWGG 2 cut(s) 916, 2080
Bst1107I GTATAC 1 cut(s) 193
Bst2BI CACGAG 1 cut(s) 410
Bst2UI CCWGG 3 cut(s) 498, 740, 756
Bst6I CTCTTC 4 cut(s) 246, 440, 1989, 2250
BstAFI CTTAAG 1 cut(s) 1721
BstAPI GCANNNNNTGC 2 cut(s) 1552, 2203
BstC8I GCNNGC 1 cut(s) 1501
BstDSI CCRYGG 2 cut(s) 1620, 1920
BstENI CCTNNNNNAGG 1 cut(s) 2084
BstF5I GGATG 6 cut(s) 238, 289, 509, 748, 911, 1132
BstFNI CGCG 1 cut(s) 299
BstMAI GTCTC 4 cut(s) 1085, 1449, 2173, 2252
BstMWI GCNNNNNNNGC 4 cut(s) 386, 1205, 1552, 2203
BstNI CCWGG 3 cut(s) 498, 740, 756
BstNSI RCATGY 1 cut(s) 262
BstSCI CCNGG 3 cut(s) 496, 738, 754
BstSFI CTRYAG 2 cut(s) 1029, 1200
BstUI CGCG 1 cut(s) 299
BstV1I GCAGC 6 cut(s) 678, 1089, 1186, 1192, 1214, 2190
BstV2I GAAGAC 2 cut(s) 1191, 2145
BstX2I RGATCY 5 cut(s) 74, 625, 946, 2036, 2221
BstXI CCANNNNNNTGG 2 cut(s) 1473, 1780
BstYI RGATCY 5 cut(s) 74, 625, 946, 2036, 2221
BstZ17I GTATAC 1 cut(s) 193
BsuRI GGCC 4 cut(s) 754, 1391, 1499, 2318
BtgI CCRYGG 2 cut(s) 1620, 1920
BtgZI GCGATG 1 cut(s) 902
BtrI CACGTC 1 cut(s) 687
BtsCI GGATG 6 cut(s) 238, 289, 509, 748, 911, 1132
BtsI GCAGTG 1 cut(s) 1906
BtsIMutI CAGTG 3 cut(s) 379, 1005, 1906
Cac8I GCNNGC 1 cut(s) 1501
CaiI CAGNNNCTG 2 cut(s) 1094, 1568
CciI TCATGA 1 cut(s) 877
Cfr10I RCCGGY 1 cut(s) 1414
Cfr13I GGNCC 3 cut(s) 91, 1412, 1498
Csp6I GTAC 4 cut(s) 202, 208, 392, 678
CspAI ACCGGT 1 cut(s) 1414
CviAII CATG 8 cut(s) 259, 878, 1370, 1630, 1804, 1810, 2176, 2218
CviQI GTAC 4 cut(s) 202, 208, 392, 678
DrdI GACNNNNNNGTC 1 cut(s) 826
DseDI GACNNNNNNGTC 1 cut(s) 826
EaeI YGGCCR 2 cut(s) 1389, 2316
Eam1104I CTCTTC 4 cut(s) 246, 440, 1989, 2250
EarI CTCTTC 4 cut(s) 246, 440, 1989, 2250
EciI GGCGGA 1 cut(s) 393
Ecl136II GAGCTC 2 cut(s) 930, 1279
Eco130I CCWWGG 2 cut(s) 916, 2080
Eco24I GRGCYC 2 cut(s) 932, 1281
Eco32I GATATC 3 cut(s) 550, 1219, 1800
Eco47I GGWCC 2 cut(s) 91, 1412
Eco53kI GAGCTC 2 cut(s) 930, 1279
Eco57I CTGAAG 5 cut(s) 464, 725, 1811, 2013, 2101
EcoICRI GAGCTC 2 cut(s) 930, 1279
EcoNI CCTNNNNNAGG 1 cut(s) 2084
EcoRII CCWGG 3 cut(s) 496, 738, 754
EcoRV GATATC 3 cut(s) 550, 1219, 1800
EcoT14I CCWWGG 2 cut(s) 916, 2080
EcoT22I ATGCAT 2 cut(s) 238, 562
EcoT38I GRGCYC 2 cut(s) 932, 1281
ErhI CCWWGG 2 cut(s) 916, 2080
FaeI CATG 8 cut(s) 262, 881, 1373, 1633, 1807, 1813, 2179, 2221
FalI AAGNNNNNCTT 4 cut(s) 1487, 1519, 2078, 2110
FaqI GGGAC 1 cut(s) 1349
FatI CATG 8 cut(s) 258, 877, 1369, 1629, 1803, 1809, 2175, 2217
FauI CCCGC 1 cut(s) 1508
FauNDI CATATG 1 cut(s) 1448
FbaI TGATCA 1 cut(s) 784
FblI GTMKAC 1 cut(s) 192
Fnu4HI GCNGC 7 cut(s) 407, 692, 1103, 1200, 1203, 1206, 2204
FokI GGATG 6 cut(s) 245, 296, 516, 755, 898, 1139
FriOI GRGCYC 2 cut(s) 932, 1281
Fsp4HI GCNGC 7 cut(s) 407, 692, 1103, 1200, 1203, 1206, 2204
FspBI CTAG 3 cut(s) 825, 1295, 1874
GluI GCNGC 7 cut(s) 407, 692, 1103, 1200, 1203, 1206, 2204
GsaI CCCAGC 1 cut(s) 1369
GsuI CTGGAG 1 cut(s) 519
HaeIII GGCC 4 cut(s) 754, 1391, 1499, 2318
HapII CCGG 1 cut(s) 1415
Hin1II CATG 8 cut(s) 262, 881, 1373, 1633, 1807, 1813, 2179, 2221
HindIII AAGCTT 5 cut(s) 378, 452, 1120, 1827, 2057
HpaII CCGG 1 cut(s) 1415
HphI GGTGA 9 cut(s) 319, 364, 829, 1273, 1636, 1646, 1795, 2159, 2277
Hpy166II GTNNAC 3 cut(s) 193, 1627, 1943
Hpy8I GTNNAC 3 cut(s) 193, 1627, 1943
Hpy99I CGWCG 1 cut(s) 688
HpyAV CCTTC 9 cut(s) 283, 700, 707, 1312, 1489, 1520, 1636, 1764, 2290
HpyCH4IV ACGT 3 cut(s) 686, 697, 2301
HpyF10VI GCNNNNNNNGC 4 cut(s) 386, 1205, 1552, 2203
HpySE526I ACGT 3 cut(s) 686, 697, 2301
Hsp92II CATG 8 cut(s) 262, 881, 1373, 1633, 1807, 1813, 2179, 2221
Ksp22I TGATCA 1 cut(s) 784
LmnI GCTCC 4 cut(s) 180, 499, 1024, 2349
Lsp1109I GCAGC 6 cut(s) 678, 1089, 1186, 1192, 1214, 2190
LweI GCATC 7 cut(s) 223, 245, 547, 920, 1117, 1752, 2130
MaeI CTAG 3 cut(s) 825, 1295, 1874
MaeII ACGT 3 cut(s) 686, 697, 2301
MaeIII GTNAC 9 cut(s) 301, 583, 817, 1309, 1360, 1654, 1688, 1814, 1960
MbiI CCGCTC 1 cut(s) 409
MfeI CAATTG 1 cut(s) 1778
MflI RGATCY 5 cut(s) 74, 625, 946, 2036, 2221
MhlI GDGCHC 3 cut(s) 932, 1281, 1356
MlsI TGGCCA 2 cut(s) 1391, 2318
MluNI TGGCCA 2 cut(s) 1391, 2318
MlyI GAGTC 3 cut(s) 35, 1795, 2347
MmeI TCCRAC 6 cut(s) 78, 102, 397, 1720, 1989, 2087
Mox20I TGGCCA 2 cut(s) 1391, 2318
Mph1103I ATGCAT 2 cut(s) 238, 562
MscI TGGCCA 2 cut(s) 1391, 2318
MseI TTAA 4 cut(s) 6, 1722, 1907, 2162
MslI CAYNNNNRTG 3 cut(s) 882, 1808, 2126
Msp20I TGGCCA 2 cut(s) 1391, 2318
MspA1I CMGCKG 2 cut(s) 1205, 1679
MspCI CTTAAG 1 cut(s) 1721
MspI CCGG 1 cut(s) 1415
MspR9I CCNGG 3 cut(s) 498, 740, 756
MunI CAATTG 1 cut(s) 1778
Mva1269I GAATGC 2 cut(s) 560, 1862
MvaI CCWGG 3 cut(s) 498, 740, 756
MvnI CGCG 1 cut(s) 299
MwoI GCNNNNNNNGC 4 cut(s) 386, 1205, 1552, 2203
NdeI CATATG 1 cut(s) 1448
NlaIII CATG 8 cut(s) 262, 881, 1373, 1633, 1807, 1813, 2179, 2221
NlaIV GGNNCC 4 cut(s) 51, 850, 1026, 2345
NmuCI GTSAC 4 cut(s) 583, 817, 1309, 1654
NsiI ATGCAT 2 cut(s) 238, 562
NspI RCATGY 1 cut(s) 262
PagI TCATGA 1 cut(s) 877
PctI GAATGC 2 cut(s) 560, 1862
PfeI GAWTC 9 cut(s) 169, 341, 721, 764, 1085, 1194, 1616, 1768, 1870
PfoI TCCNGGA 2 cut(s) 496, 738
PinAI ACCGGT 1 cut(s) 1414
PkrI GCNGC 7 cut(s) 408, 693, 1104, 1201, 1204, 1207, 2205
PleI GAGTC 3 cut(s) 35, 1794, 2347
PpsI GAGTC 3 cut(s) 35, 1794, 2347
Psp124BI GAGCTC 2 cut(s) 932, 1281
Psp1406I AACGTT 1 cut(s) 697
Psp6I CCWGG 3 cut(s) 496, 738, 754
PspFI CCCAGC 1 cut(s) 1365
PspGI CCWGG 3 cut(s) 496, 738, 754
PspN4I GGNNCC 4 cut(s) 51, 850, 1026, 2345
PspPI GGNCC 3 cut(s) 91, 1412, 1498
PstI CTGCAG 1 cut(s) 1204
PstNI CAGNNNCTG 2 cut(s) 1094, 1568
PsuI RGATCY 5 cut(s) 74, 625, 946, 2036, 2221
PvuII CAGCTG 2 cut(s) 1205, 1679
RsaI GTAC 4 cut(s) 203, 209, 393, 679
RsaNI GTAC 4 cut(s) 202, 208, 392, 678
RseI CAYNNNNRTG 3 cut(s) 882, 1808, 2126
SacI GAGCTC 2 cut(s) 932, 1281
SaqAI TTAA 4 cut(s) 6, 1722, 1907, 2162
SatI GCNGC 7 cut(s) 407, 692, 1103, 1200, 1203, 1206, 2204
Sau96I GGNCC 3 cut(s) 91, 1412, 1498
SchI GAGTC 3 cut(s) 35, 1795, 2347
ScrFI CCNGG 3 cut(s) 498, 740, 756
SduI GDGCHC 3 cut(s) 932, 1281, 1356
SfaNI GCATC 7 cut(s) 223, 245, 547, 920, 1117, 1752, 2130
SfcI CTRYAG 2 cut(s) 1029, 1200
SinI GGWCC 2 cut(s) 91, 1412
SmiMI CAYNNNNRTG 3 cut(s) 882, 1808, 2126
SmlI CTYRAG 3 cut(s) 1721, 2188, 2225
SmoI CTYRAG 3 cut(s) 1721, 2188, 2225
SsiI CCGC 5 cut(s) 299, 326, 404, 407, 1501
SspI AATATT 2 cut(s) 616, 2267
SspMI CTAG 3 cut(s) 825, 1295, 1874
SstI GAGCTC 2 cut(s) 932, 1281
StyD4I CCNGG 3 cut(s) 496, 738, 754
StyI CCWWGG 2 cut(s) 916, 2080
TaiI ACGT 3 cut(s) 689, 700, 2304
TaqI TCGA 4 cut(s) 172, 344, 1890, 2054
TatI WGTACW 1 cut(s) 677
TauI GCSGC 1 cut(s) 409
TfiI GAWTC 9 cut(s) 169, 341, 721, 764, 1085, 1194, 1616, 1768, 1870
Tru1I TTAA 4 cut(s) 6, 1722, 1907, 2162
Tru9I TTAA 4 cut(s) 6, 1722, 1907, 2162
TscAI CASTG 3 cut(s) 379, 1005, 1906
TseFI GTSAC 4 cut(s) 583, 817, 1309, 1654
TseI GCWGC 6 cut(s) 691, 1102, 1199, 1202, 1205, 2203
Tsp45I GTSAC 4 cut(s) 583, 817, 1309, 1654
TspGWI ACGGA 2 cut(s) 812, 1609
TspRI CASTG 3 cut(s) 379, 1005, 1906
Vha464I CTTAAG 1 cut(s) 1721
VpaK11BI GGWCC 2 cut(s) 91, 1412
XagI CCTNNNNNAGG 1 cut(s) 2084
XapI RAATTY 4 cut(s) 29, 833, 1585, 2014
XbaI TCTAGA 1 cut(s) 1873
XceI RCATGY 1 cut(s) 262
XcmI CCANNNNNNNNNTGG 1 cut(s) 85
XmiI GTMKAC 1 cut(s) 192
XspI CTAG 3 cut(s) 825, 1295, 1874
Zsp2I ATGCAT 2 cut(s) 238, 562
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.