Rh2AG170000

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000039
Physical Location & Seq
Forward (+)
16140245 .. 16146427
6183 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG170000.1

Sequence Viewer

Length: 1377 bp
ATGGCCAATTCAGTGGATGTTTTCGCCGGGGCTGGTGGAGGATTACTATTCAATGTGCTCTATGATGGCCTCAAGGAGCTGACCACCAAGTATGTGCTGTTCAAATACGTCCTCAAAAGCGTCAAATCCACACTCGAATCTCTGGAGCAAGTGGTTCAAGACATAGAACGACTTAACGAGGATCTGGATCGCCCGGAGGAAGAACTAGCGAGTCTAAAAGCCCAACTAGAGGAGGGTGAAGTGCTCGTTGCCAAGTGCGGCAAGGTTCGTGTGTGGAGTGTGTACAAGAAGTACAAGTACTCCAGGAAACTTCTTGGATGGAATGACAGTCTTCAAGAACAGTTGGATATGCTCAAAGTTCATTCAATAAGAGATGGGAAGGAGACCTTGACAACGGTGAACAGAACAGAGAAGACTGTGAGCCAAATCGAATCGACCAGTTTCAATATAAAGGAGGGAGTGGAGCAAATTGAGACTAACACTGCAAATCTACAGGTGGCGGTGAGCCGAGTGGAAGCGAGAGTTTCGAATATAGAGGCTGGGATAAAGCAAATGCAACCGGAAGCTAAAATTGAAGCTTGGTGTGCAGTACCTGAACTTCCAACTCTTACAGTTGGATTGGATGGGCCTTTGAACGAACTGAAGATGAAGTTGTTCAACAATGGAGCGTCAATGGTTGTGCTGACCGCTCCCGGAGGATGTGGAAAAACCACTTTGGCAACAAAGTTCTGTCAAGATGAGCAAGTCCAAGGAATGGTCAATCCAGTGGATAAACTTTTTGATGAGCTGTACATTGTCTTTAAAGACCTCATCAAGAAGAATATTGAATTTAAAGGGAAACTTGAAGGCATCGAAGCCAAGCTAGAAGCTCTAAAGCCGGTGATCCGAGACATGGTGCAGAATAATGAGGTATTAGATCGCTCAAGGAAGGAACTAACAGGTTTAACTGGAGTTATGGAGTCTGGCATTAAGCTCATTGGCAAGTGCTCAAAGTTTCGGGTGTGGAAGGTCTTCAAGAAGTACAAATACGCCAACGAACTTATTGAATGGGAGAAAAGTCTAGAAAGTGAGTTAGTTATACTGAACGTGCAGACCAGCAGGGATGTGAAGGACATTGCAAGAGAGGTGAAGGAGAATGCAGGGGTTGCAAAGGAGACTGCAGATAGGTTGAAGAATGTGGAGACTTTGGTAGAGAATATAGAGGAGAAATTGGACCGAATTGTGATACAAAATCAACCTGGGGAACCTAAAGCCTGGATGAGTACTGAAGTACCTGAGCTTCCACGTTTTATAGTGGGACTGGACAAGCATTTGAAGGAATTGAAGATGAAGCTTCTTAAGGATGGCGGGTCAATGCTTGTGATAACAGCTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

458

Amino Acids

51.49

Weight (kDa)

5.9

Isoelectric Point (pI)

35.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 6 - 137 1.4e-27 Arabidopsis broad-spectrum mildew resistance protein RPW8
RPW8 PF05659 260 - 379 2.1e-20 Arabidopsis broad-spectrum mildew resistance protein RPW8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 754
AccBSI CCGCTC 1 cut(s) 689
AciI CCGC 4 cut(s) 258, 500, 687, 1347
AclWI GGATC 3 cut(s) 189, 195, 877
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 827
AcuI CTGAAG 2 cut(s) 662, 1287
AfaI GTAC 8 cut(s) 284, 293, 299, 591, 791, 1022, 1264, 1272
AfiI CCNNNNNNNGG 3 cut(s) 229, 754, 892
AflII CTTAAG 1 cut(s) 1337
AjnI CCWGG 3 cut(s) 302, 1237, 1253
Alw21I GWGCWC 3 cut(s) 60, 246, 989
Alw26I GTCTC 5 cut(s) 377, 467, 882, 1148, 1175
AlwI GGATC 3 cut(s) 189, 195, 877
AlwNI CAGNNNCTG 1 cut(s) 593
AoxI GGCC 3 cut(s) 3, 67, 626
ApoI RAATTY 1 cut(s) 827
Asp700I GAANNNNTTC 2 cut(s) 653, 1010
AspS9I GGNCC 2 cut(s) 626, 1213
AsuC2I CCSGG 3 cut(s) 28, 194, 693
AsuHPI GGTGA 5 cut(s) 248, 409, 514, 892, 1138
AsuII TTCGAA 1 cut(s) 527
AvaII GGWCC 1 cut(s) 1213
BaeI ACNNNNGTAYC 2 cut(s) 1254, 1287
BalI TGGCCA 1 cut(s) 5
BarI GAAGNNNNNNTAC 8 cut(s) 281, 313, 582, 614, 1010, 1042, 1263, 1295
BbsI GAAGAC 3 cut(s) 323, 419, 1003
Bbv12I GWGCWC 3 cut(s) 60, 246, 989
BccI CCATC 5 cut(s) 59, 312, 368, 617, 1337
BciT130I CCWGG 3 cut(s) 304, 1239, 1255
BcnI CCSGG 3 cut(s) 28, 194, 693
BcoDI GTCTC 5 cut(s) 377, 467, 882, 1148, 1175
BfaI CTAG 4 cut(s) 206, 227, 863, 1061
BfmI CTRYAG 2 cut(s) 491, 1158
BfrI CTTAAG 1 cut(s) 1337
BisI GCNGC 1 cut(s) 259
BlsI GCNGC 1 cut(s) 260
BmcAI AGTACT 2 cut(s) 299, 1264
Bme1390I CCNGG 6 cut(s) 28, 194, 304, 693, 1239, 1255
Bme18I GGWCC 1 cut(s) 1213
BmgT120I GGNCC 2 cut(s) 626, 1213
BmiI GGNNCC 1 cut(s) 1245
BmrFI CCNGG 6 cut(s) 28, 194, 304, 693, 1239, 1255
BmsI GCATC 1 cut(s) 858
BpiI GAAGAC 3 cut(s) 323, 419, 1003
BpmI CTGGAG 3 cut(s) 164, 286, 969
Bpu10I CCTNAGC 1 cut(s) 1275
Bpu14I TTCGAA 1 cut(s) 527
BpuEI CTTGAG 2 cut(s) 56, 907
BpuMI CCSGG 3 cut(s) 28, 194, 693
BsaBI GATNNNNATC 1 cut(s) 186
BsaI GGTCTC 1 cut(s) 377
BsaJI CCNNGG 3 cut(s) 27, 748, 1238
BsaWI WCCGGW 1 cut(s) 559
BsaXI ACNNNNNCTCC 2 cut(s) 284, 314
Bsc4I CCNNNNNNNGG 3 cut(s) 229, 754, 892
Bse118I RCCGGY 1 cut(s) 877
Bse1I ACTGG 4 cut(s) 438, 764, 952, 1305
Bse3DI GCAATG 1 cut(s) 1113
Bse8I GATNNNNATC 1 cut(s) 186
BseBI CCWGG 3 cut(s) 304, 1239, 1255
BseDI CCNNGG 3 cut(s) 27, 748, 1238
BseGI GGATG 7 cut(s) 22, 323, 628, 704, 1108, 1263, 1348
BseJI GATNNNNATC 1 cut(s) 186
BseLI CCNNNNNNNGG 3 cut(s) 229, 754, 892
BseMI GCAATG 1 cut(s) 1113
BseMII CTCAG 1 cut(s) 1266
BseNI ACTGG 4 cut(s) 438, 764, 952, 1305
BseRI GAGGAG 2 cut(s) 245, 1217
BseYI CCCAGC 1 cut(s) 539
BsgI GTGCAG 3 cut(s) 606, 917, 1109
BshFI GGCC 3 cut(s) 5, 69, 628
BsiHKAI GWGCWC 3 cut(s) 60, 246, 989
BsiSI CCGG 5 cut(s) 27, 194, 560, 693, 878
BslFI GGGAC 1 cut(s) 1311
BslI CCNNNNNNNGG 3 cut(s) 229, 754, 892
BsmAI GTCTC 5 cut(s) 377, 467, 882, 1148, 1175
BsmFI GGGAC 1 cut(s) 1311
BsmI GAATGC 1 cut(s) 1141
BsnI GGCC 3 cut(s) 5, 69, 628
Bso31I GGTCTC 1 cut(s) 377
Bsp119I TTCGAA 1 cut(s) 527
Bsp1286I GDGCHC 3 cut(s) 60, 246, 989
Bsp1407I TGTACA 2 cut(s) 282, 789
Bsp143I GATC 4 cut(s) 181, 187, 882, 916
BspACI CCGC 4 cut(s) 258, 500, 687, 1347
BspANI GGCC 3 cut(s) 5, 69, 628
BspCNI CTCAG 1 cut(s) 1267
BspLI GGNNCC 1 cut(s) 1245
BspMAI CTGCAG 1 cut(s) 1162
BspPI GGATC 3 cut(s) 189, 195, 877
BspT104I TTCGAA 1 cut(s) 527
BspTI CTTAAG 1 cut(s) 1337
BspTNI GGTCTC 1 cut(s) 377
BsrBI CCGCTC 1 cut(s) 689
BsrDI GCAATG 1 cut(s) 1113
BsrFI RCCGGY 1 cut(s) 877
BsrGI TGTACA 2 cut(s) 282, 789
BsrI ACTGG 4 cut(s) 438, 764, 952, 1305
BssAI RCCGGY 1 cut(s) 877
BssECI CCNNGG 3 cut(s) 27, 748, 1238
BssMI GATC 4 cut(s) 181, 187, 882, 916
BssT1I CCWWGG 1 cut(s) 748
Bst2UI CCWGG 3 cut(s) 304, 1239, 1255
Bst4CI ACNGT 5 cut(s) 329, 342, 397, 418, 613
BstAFI CTTAAG 1 cut(s) 1337
BstAPI GCANNNNNTGC 1 cut(s) 1145
BstAUI TGTACA 2 cut(s) 282, 789
BstBI TTCGAA 1 cut(s) 527
BstDEI CTNAG 1 cut(s) 1275
BstF5I GGATG 7 cut(s) 22, 323, 628, 704, 1108, 1263, 1348
BstKTI GATC 4 cut(s) 184, 190, 885, 919
BstMAI GTCTC 5 cut(s) 377, 467, 882, 1148, 1175
BstMBI GATC 4 cut(s) 181, 187, 882, 916
BstMWI GCNNNNNNNGC 2 cut(s) 584, 1145
BstNI CCWGG 3 cut(s) 304, 1239, 1255
BstSCI CCNGG 6 cut(s) 26, 192, 302, 691, 1237, 1253
BstSFI CTRYAG 2 cut(s) 491, 1158
BstV2I GAAGAC 3 cut(s) 323, 419, 1003
BstX2I RGATCY 1 cut(s) 181
BstXI CCANNNNNNTGG 1 cut(s) 13
BstYI RGATCY 1 cut(s) 181
BsuRI GGCC 3 cut(s) 5, 69, 628
BtsCI GGATG 7 cut(s) 22, 323, 628, 704, 1108, 1263, 1348
BtsI GCAGTG 1 cut(s) 480
BtsIMutI CAGTG 3 cut(s) 18, 480, 771
CaiI CAGNNNCTG 1 cut(s) 593
Cfr10I RCCGGY 1 cut(s) 877
Cfr13I GGNCC 2 cut(s) 626, 1213
CseI GACGC 2 cut(s) 109, 657
Csp6I GTAC 8 cut(s) 283, 292, 298, 590, 790, 1021, 1263, 1271
CviAII CATG 1 cut(s) 892
CviQI GTAC 8 cut(s) 283, 292, 298, 590, 790, 1021, 1263, 1271
DdeI CTNAG 1 cut(s) 1275
DpnI GATC 4 cut(s) 183, 189, 884, 918
DpnII GATC 4 cut(s) 181, 187, 882, 916
DraI TTTAAA 2 cut(s) 802, 832
EaeI YGGCCR 1 cut(s) 3
Eco130I CCWWGG 1 cut(s) 748
Eco31I GGTCTC 1 cut(s) 377
Eco47I GGWCC 1 cut(s) 1213
Eco57I CTGAAG 2 cut(s) 662, 1287
EcoRII CCWGG 3 cut(s) 302, 1237, 1253
EcoT14I CCWWGG 1 cut(s) 748
ErhI CCWWGG 1 cut(s) 748
FaeI CATG 1 cut(s) 895
FalI AAGNNNNNCTT 4 cut(s) 371, 403, 825, 857
FaqI GGGAC 1 cut(s) 1311
FatI CATG 1 cut(s) 891
FauI CCCGC 1 cut(s) 1340
Fnu4HI GCNGC 1 cut(s) 259
FokI GGATG 7 cut(s) 29, 330, 635, 711, 1115, 1270, 1355
Fsp4HI GCNGC 1 cut(s) 259
FspBI CTAG 4 cut(s) 206, 227, 863, 1061
GluI GCNGC 1 cut(s) 259
GsaI CCCAGC 1 cut(s) 543
GsuI CTGGAG 3 cut(s) 164, 286, 969
HaeIII GGCC 3 cut(s) 5, 69, 628
HapII CCGG 5 cut(s) 27, 194, 560, 693, 878
HgaI GACGC 2 cut(s) 109, 657
Hin1II CATG 1 cut(s) 895
HindIII AAGCTT 2 cut(s) 576, 1331
HinfI GANTC 4 cut(s) 137, 211, 431, 959
HpaII CCGG 5 cut(s) 27, 194, 560, 693, 878
HphI GGTGA 5 cut(s) 248, 409, 514, 892, 1138
Hpy166II GTNNAC 2 cut(s) 283, 400
Hpy188I TCNGA 1 cut(s) 887
Hpy188III TCNNGA 8 cut(s) 143, 158, 185, 335, 734, 814, 1015, 1061
Hpy8I GTNNAC 2 cut(s) 283, 400
HpyAV CCTTC 7 cut(s) 373, 839, 922, 1000, 1102, 1123, 1309
HpyCH4III ACNGT 5 cut(s) 329, 342, 397, 418, 613
HpyCH4IV ACGT 3 cut(s) 108, 1086, 1285
HpyCH4V TGCA 9 cut(s) 485, 556, 587, 898, 1090, 1118, 1139, 1148, 1160
HpyF10VI GCNNNNNNNGC 2 cut(s) 584, 1145
HpyF3I CTNAG 1 cut(s) 1275
HpySE526I ACGT 3 cut(s) 108, 1086, 1285
Hsp92II CATG 1 cut(s) 895
Kzo9I GATC 4 cut(s) 181, 187, 882, 916
LmnI GCTCC 5 cut(s) 76, 145, 463, 665, 694
LweI GCATC 1 cut(s) 858
MaeI CTAG 4 cut(s) 206, 227, 863, 1061
MaeII ACGT 3 cut(s) 108, 1086, 1285
MalI GATC 4 cut(s) 183, 189, 884, 918
MbiI CCGCTC 1 cut(s) 689
MboI GATC 4 cut(s) 181, 187, 882, 916
MboII GAAGA 8 cut(s) 212, 323, 424, 655, 829, 1003, 1183, 1336
MflI RGATCY 1 cut(s) 181
MhlI GDGCHC 3 cut(s) 60, 246, 989
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 7 cut(s) 7, 468, 570, 827, 1208, 1218, 1319
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 220, 968
MmeI TCCRAC 3 cut(s) 324, 595, 626
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 2 cut(s) 653, 1010
MscI TGGCCA 1 cut(s) 5
MseI TTAA 7 cut(s) 174, 801, 831, 944, 969, 1338, 1375
Msp20I TGGCCA 1 cut(s) 5
MspCI CTTAAG 1 cut(s) 1337
MspI CCGG 5 cut(s) 27, 194, 560, 693, 878
MspR9I CCNGG 6 cut(s) 28, 194, 304, 693, 1239, 1255
Mva1269I GAATGC 1 cut(s) 1141
MvaI CCWGG 3 cut(s) 304, 1239, 1255
MwoI GCNNNNNNNGC 2 cut(s) 584, 1145
NciI CCSGG 3 cut(s) 28, 194, 693
NdeII GATC 4 cut(s) 181, 187, 882, 916
NlaIII CATG 1 cut(s) 895
NlaIV GGNNCC 1 cut(s) 1245
NmeAIII GCCGAG 1 cut(s) 533
NspV TTCGAA 1 cut(s) 527
PctI GAATGC 1 cut(s) 1141
PdmI GAANNNNTTC 2 cut(s) 653, 1010
PfeI GAWTC 2 cut(s) 137, 431
PflMI CCANNNNNTGG 1 cut(s) 754
PfoI TCCNGGA 2 cut(s) 302, 691
PkrI GCNGC 1 cut(s) 260
PleI GAGTC 2 cut(s) 219, 967
PpsI GAGTC 2 cut(s) 219, 967
Psp6I CCWGG 3 cut(s) 302, 1237, 1253
PspFI CCCAGC 1 cut(s) 539
PspGI CCWGG 3 cut(s) 302, 1237, 1253
PspN4I GGNNCC 1 cut(s) 1245
PspPI GGNCC 2 cut(s) 626, 1213
PsrI GAACNNNNNNTAC 2 cut(s) 83, 115
PstI CTGCAG 1 cut(s) 1162
PstNI CAGNNNCTG 1 cut(s) 593
PsuI RGATCY 1 cut(s) 181
RsaI GTAC 8 cut(s) 284, 293, 299, 591, 791, 1022, 1264, 1272
RsaNI GTAC 8 cut(s) 283, 292, 298, 590, 790, 1021, 1263, 1271
SaqAI TTAA 7 cut(s) 174, 801, 831, 944, 969, 1338, 1375
SatI GCNGC 1 cut(s) 259
Sau3AI GATC 4 cut(s) 181, 187, 882, 916
Sau96I GGNCC 2 cut(s) 626, 1213
ScaI AGTACT 2 cut(s) 299, 1264
SchI GAGTC 2 cut(s) 220, 968
ScrFI CCNGG 6 cut(s) 28, 194, 304, 693, 1239, 1255
SduI GDGCHC 3 cut(s) 60, 246, 989
SfaNI GCATC 1 cut(s) 858
SfcI CTRYAG 2 cut(s) 491, 1158
SfuI TTCGAA 1 cut(s) 527
SinI GGWCC 1 cut(s) 1213
SmlI CTYRAG 3 cut(s) 71, 922, 1337
SmoI CTYRAG 3 cut(s) 71, 922, 1337
Sse9I AATT 7 cut(s) 7, 468, 570, 827, 1208, 1218, 1319
SsiI CCGC 4 cut(s) 258, 500, 687, 1347
SspI AATATT 1 cut(s) 823
SspMI CTAG 4 cut(s) 206, 227, 863, 1061
StyD4I CCNGG 6 cut(s) 26, 192, 302, 691, 1237, 1253
StyI CCWWGG 1 cut(s) 748
TaaI ACNGT 5 cut(s) 329, 342, 397, 418, 613
TaiI ACGT 3 cut(s) 111, 1089, 1288
TaqI TCGA 5 cut(s) 135, 429, 434, 527, 852
TaqII GACCGA 1 cut(s) 1230
TasI AATT 7 cut(s) 7, 468, 570, 827, 1208, 1218, 1319
TatI WGTACW 6 cut(s) 282, 291, 297, 789, 1020, 1262
TauI GCSGC 1 cut(s) 261
TfiI GAWTC 2 cut(s) 137, 431
Tru1I TTAA 7 cut(s) 174, 801, 831, 944, 969, 1338, 1375
Tru9I TTAA 7 cut(s) 174, 801, 831, 944, 969, 1338, 1375
TscAI CASTG 3 cut(s) 18, 487, 771
TspDTI ATGAA 3 cut(s) 350, 662, 1343
TspRI CASTG 3 cut(s) 18, 487, 771
Van91I CCANNNNNTGG 1 cut(s) 754
Vha464I CTTAAG 1 cut(s) 1337
VpaK11BI GGWCC 1 cut(s) 1213
XapI RAATTY 1 cut(s) 827
XbaI TCTAGA 1 cut(s) 1060
XmnI GAANNNNTTC 2 cut(s) 653, 1010
XspI CTAG 4 cut(s) 206, 227, 863, 1061
ZrmI AGTACT 2 cut(s) 299, 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.