Rorug02G0550000

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
67747844 .. 67749438
1595 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0550000.1

Sequence Viewer

Length: 1047 bp
ATGGCAGCGTCTGGTTTTAAGGGTACTATCCCCTCGATCTGGCGTATTAAGTCAGGTCTGACAGTTCATGATGCTGGAGATCGATTCTTGTTCCAATTTGATCGGGAGGCTGATCGGAATAGGGCACTTCATGGAGGCCCTTGGTTCTATAGGAATACTATGCTCCTTCTTGGTGAGTATGATGGAGTTGGCGCGGTGGAGGCGGTTCCACTATGGAGGTTGGAAACATGGGTGGCCGTTCGTGGTCTTCTTTTGGCGCTTCAAAAAAGATCTGCCCTAACTTTAATTGGGTCGATTCTGGGTCAGGTTATCAGGTTTGATCTACCGGCTCTCCGGCGTAGGAAAGAGGAACAGAGAATCCGTTTGATTTTGGATACTCGTCGTCGGATTCGCTCTTGGATTGCAGGAAAAGGCAGATCTGCTGAAGTCGCCGCCGACAACTGCTATGGCAGGCCTGACTTGGAGTCGGGTTCGGCTGCAGCGAGTGGTATGGTGCTGCAGAAAGAGGGGAATGGTAAGGATCTGATGCTGGTTGTACCTTCGGGTCTGGTACCGGAGGAGAGTGTAGATTTGCAGACTGACGTGCATGGAGATGTGGTAGTCCAAGCGTCGTTGGGACATGCAGGTCAGTCGGAGTCTAAGCCAACTGGGGCCTCTATCTGTACTGTTCCTTTTATTGCAGGTTTGGAGCAAGCAAATATCTTCAAGAACTGGGAAGCTTTGGTGCCAGCTAATTCAATGGAAAAGGTGCTTCTAGTGCAGATTGCTTCGACCACTTTGAAAGCTAGGAAATCAGGGCCTGAACAAAATGTTGTGGAGACTATACTTGTGGGTACAAAACGTAAAGCGGCCTTTGAGCTGATTAAACCTGGGAAGAGATTTTTGGCTCTCCCAGCCCCTGAGCTTCAGGTGGATGAACATACAACCCTGTTGTTGCAGCATAAAAATGGGACGTCCATTGATACCGAGGTTCCTGTGGTGGAGGCTTTAGGGAAGGAAGTGGTTATGGAAGGGGAGTCTATTTCCCTTCCTGCTATTGCTATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

348

Amino Acids

37.87

Weight (kDa)

8.47

Isoelectric Point (pI)

43.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 8 - 58 6.4e-09 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 624
AatII GACGTC 1 cut(s) 956
Acc36I ACCTGC 2 cut(s) 614, 671
Acc65I GGTACC 1 cut(s) 550
AccB1I GGYRCC 2 cut(s) 550, 724
AccII CGCG 1 cut(s) 194
AciI CCGC 4 cut(s) 194, 203, 432, 848
AclWI GGATC 1 cut(s) 528
AcoI YGGCCR 1 cut(s) 234
AcuI CTGAAG 2 cut(s) 444, 890
AcyI GRCGYC 1 cut(s) 953
AfaI GTAC 5 cut(s) 25, 537, 552, 664, 835
AfiI CCNNNNNNNGG 1 cut(s) 39
AgsI TTSAA 4 cut(s) 263, 706, 738, 781
AhdI GACNNNNNGTC 1 cut(s) 463
AjiI CACGTC 1 cut(s) 583
AjnI CCWGG 1 cut(s) 868
AjuI GAANNNNNNNTTGG 2 cut(s) 866, 898
AloI GAACNNNNNNTCC 2 cut(s) 342, 374
AluBI AGCT 5 cut(s) 719, 731, 785, 859, 904
AluI AGCT 5 cut(s) 719, 731, 785, 859, 904
Alw26I GTCTC 1 cut(s) 812
AlwI GGATC 1 cut(s) 528
AlwNI CAGNNNCTG 3 cut(s) 11, 800, 899
AoxI GGCC 6 cut(s) 136, 234, 452, 651, 797, 849
ApeKI GCWGC 5 cut(s) 5, 476, 479, 496, 937
Asp718I GGTACC 1 cut(s) 550
AspLEI GCGC 2 cut(s) 194, 259
AspS9I GGNCC 3 cut(s) 137, 651, 797
AsuHPI GGTGA 1 cut(s) 185
BaeGI GKGCMC 1 cut(s) 127
BaeI ACNNNNGTAYC 2 cut(s) 954, 987
BanI GGYRCC 2 cut(s) 550, 724
BbsI GAAGAC 1 cut(s) 239
BbvI GCAGC 5 cut(s) 17, 463, 483, 491, 949
BccI CCATC 1 cut(s) 176
BceAI ACGGC 1 cut(s) 221
BcgI CGANNNNNNTGC 2 cut(s) 612, 646
BciT130I CCWGG 1 cut(s) 870
BciVI GTATCC 1 cut(s) 367
BcoDI GTCTC 1 cut(s) 812
BfaI CTAG 2 cut(s) 755, 786
BfmI CTRYAG 3 cut(s) 148, 477, 497
BfoI RGCGCY 1 cut(s) 260
BfuAI ACCTGC 2 cut(s) 614, 671
BfuI GTATCC 1 cut(s) 367
BglII AGATCT 2 cut(s) 269, 416
BisI GCNGC 7 cut(s) 6, 432, 477, 480, 497, 849, 938
BlsI GCNGC 7 cut(s) 7, 433, 478, 481, 498, 850, 939
Bme1390I CCNGG 1 cut(s) 870
BmeRI GACNNNNNGTC 1 cut(s) 463
BmgBI CACGTC 1 cut(s) 583
BmgT120I GGNCC 3 cut(s) 137, 651, 797
BmiI GGNNCC 5 cut(s) 207, 552, 652, 726, 972
BmrFI CCNGG 1 cut(s) 870
BmrI ACTGGG 2 cut(s) 657, 721
BmsI GCATC 2 cut(s) 61, 516
BmuI ACTGGG 2 cut(s) 657, 721
BpiI GAAGAC 1 cut(s) 239
BpmI CTGGAG 1 cut(s) 96
Bpu10I CCTNAGC 1 cut(s) 900
Bsa29I ATCGAT 1 cut(s) 82
BsaHI GRCGYC 1 cut(s) 953
BsaJI CCNNGG 3 cut(s) 140, 869, 966
BsaWI WCCGGW 1 cut(s) 553
BsaXI ACNNNNNCTCC 4 cut(s) 315, 345, 582, 612
Bsc4I CCNNNNNNNGG 1 cut(s) 39
Bse118I RCCGGY 1 cut(s) 325
Bse1I ACTGG 2 cut(s) 652, 716
BseBI CCWGG 1 cut(s) 870
BseCI ATCGAT 1 cut(s) 82
BseDI CCNNGG 3 cut(s) 140, 869, 966
BseGI GGATG 1 cut(s) 919
BseLI CCNNNNNNNGG 1 cut(s) 39
BseMII CTCAG 1 cut(s) 891
BseNI ACTGG 2 cut(s) 652, 716
BseRI GAGGAG 1 cut(s) 572
BseSI GKGCMC 1 cut(s) 127
BseXI GCAGC 5 cut(s) 17, 463, 483, 491, 949
BseYI CCCAGC 1 cut(s) 892
BsgI GTGCAG 1 cut(s) 779
Bsh1236I CGCG 1 cut(s) 194
BshFI GGCC 6 cut(s) 138, 236, 454, 653, 799, 851
BshNI GGYRCC 2 cut(s) 550, 724
BshVI ATCGAT 1 cut(s) 82
BsiSI CCGG 3 cut(s) 326, 334, 554
BslFI GGGAC 2 cut(s) 630, 964
BslI CCNNNNNNNGG 1 cut(s) 39
BsmAI GTCTC 1 cut(s) 812
BsmFI GGGAC 2 cut(s) 630, 964
BsnI GGCC 6 cut(s) 138, 236, 454, 653, 799, 851
Bsp1286I GDGCHC 1 cut(s) 127
Bsp143I GATC 8 cut(s) 36, 79, 100, 112, 269, 319, 416, 520
BspACI CCGC 4 cut(s) 194, 203, 432, 848
BspANI GGCC 6 cut(s) 138, 236, 454, 653, 799, 851
BspCNI CTCAG 1 cut(s) 892
BspDI ATCGAT 1 cut(s) 82
BspFNI CGCG 1 cut(s) 194
BspHI TCATGA 1 cut(s) 67
BspLI GGNNCC 5 cut(s) 207, 552, 652, 726, 972
BspMAI CTGCAG 2 cut(s) 481, 501
BspMI ACCTGC 2 cut(s) 614, 671
BspPI GGATC 1 cut(s) 528
BspT107I GGYRCC 2 cut(s) 550, 724
BsrFI RCCGGY 1 cut(s) 325
BsrI ACTGG 2 cut(s) 652, 716
BssAI RCCGGY 1 cut(s) 325
BssECI CCNNGG 3 cut(s) 140, 869, 966
BssMI GATC 8 cut(s) 36, 79, 100, 112, 269, 319, 416, 520
BssNI GRCGYC 1 cut(s) 953
BssT1I CCWWGG 1 cut(s) 140
Bst2UI CCWGG 1 cut(s) 870
Bst4CI ACNGT 2 cut(s) 64, 667
Bst6I CTCTTC 1 cut(s) 869
BstACI GRCGYC 1 cut(s) 953
BstC8I GCNNGC 3 cut(s) 452, 693, 729
BstDEI CTNAG 2 cut(s) 639, 900
BstF5I GGATG 1 cut(s) 919
BstFNI CGCG 1 cut(s) 194
BstH2I RGCGCY 1 cut(s) 260
BstHHI GCGC 2 cut(s) 194, 259
BstKTI GATC 8 cut(s) 39, 82, 103, 115, 272, 322, 419, 523
BstMAI GTCTC 1 cut(s) 812
BstMBI GATC 8 cut(s) 36, 79, 100, 112, 269, 319, 416, 520
BstMWI GCNNNNNNNGC 4 cut(s) 200, 428, 757, 893
BstNI CCWGG 1 cut(s) 870
BstNSI RCATGY 1 cut(s) 623
BstSCI CCNGG 1 cut(s) 868
BstSFI CTRYAG 3 cut(s) 148, 477, 497
BstSLI GKGCMC 1 cut(s) 127
BstUI CGCG 1 cut(s) 194
BstV1I GCAGC 5 cut(s) 17, 463, 483, 491, 949
BstV2I GAAGAC 1 cut(s) 239
BstX2I RGATCY 3 cut(s) 269, 416, 520
BstYI RGATCY 3 cut(s) 269, 416, 520
Bsu15I ATCGAT 1 cut(s) 82
BsuI GTATCC 1 cut(s) 367
BsuRI GGCC 6 cut(s) 138, 236, 454, 653, 799, 851
BsuTUI ATCGAT 1 cut(s) 82
BtrI CACGTC 1 cut(s) 583
BtsCI GGATG 1 cut(s) 919
BveI ACCTGC 2 cut(s) 614, 671
Cac8I GCNNGC 3 cut(s) 452, 693, 729
CaiI CAGNNNCTG 3 cut(s) 11, 800, 899
CciI TCATGA 1 cut(s) 67
CfoI GCGC 2 cut(s) 194, 259
Cfr10I RCCGGY 1 cut(s) 325
Cfr13I GGNCC 3 cut(s) 137, 651, 797
ClaI ATCGAT 1 cut(s) 82
CseI GACGC 1 cut(s) 597
Csp6I GTAC 5 cut(s) 24, 536, 551, 663, 834
CviAII CATG 5 cut(s) 68, 131, 228, 587, 620
CviQI GTAC 5 cut(s) 24, 536, 551, 663, 834
DdeI CTNAG 2 cut(s) 639, 900
DpnI GATC 8 cut(s) 38, 81, 102, 114, 271, 321, 418, 522
DpnII GATC 8 cut(s) 36, 79, 100, 112, 269, 319, 416, 520
DrdI GACNNNNNNGTC 1 cut(s) 624
DriI GACNNNNNGTC 1 cut(s) 463
DseDI GACNNNNNNGTC 1 cut(s) 624
EaeI YGGCCR 1 cut(s) 234
Eam1104I CTCTTC 1 cut(s) 869
Eam1105I GACNNNNNGTC 1 cut(s) 463
EarI CTCTTC 1 cut(s) 869
Eco130I CCWWGG 1 cut(s) 140
Eco147I AGGCCT 1 cut(s) 454
Eco57I CTGAAG 2 cut(s) 444, 890
EcoO109I RGGNCCY 3 cut(s) 137, 651, 797
EcoRII CCWGG 1 cut(s) 868
EcoT14I CCWWGG 1 cut(s) 140
ErhI CCWWGG 1 cut(s) 140
FaeI CATG 5 cut(s) 71, 134, 231, 590, 623
FaqI GGGAC 2 cut(s) 630, 964
FatI CATG 5 cut(s) 67, 130, 227, 586, 619
Fnu4HI GCNGC 7 cut(s) 6, 432, 477, 480, 497, 849, 938
FokI GGATG 1 cut(s) 926
Fsp4HI GCNGC 7 cut(s) 6, 432, 477, 480, 497, 849, 938
FspBI CTAG 2 cut(s) 755, 786
GlaI GCGC 2 cut(s) 193, 258
GluI GCNGC 7 cut(s) 6, 432, 477, 480, 497, 849, 938
GsaI CCCAGC 1 cut(s) 896
GsuI CTGGAG 1 cut(s) 96
HaeII RGCGCY 1 cut(s) 260
HaeIII GGCC 6 cut(s) 138, 236, 454, 653, 799, 851
HapII CCGG 3 cut(s) 326, 334, 554
HgaI GACGC 1 cut(s) 597
HhaI GCGC 2 cut(s) 194, 259
Hin1I GRCGYC 1 cut(s) 953
Hin1II CATG 5 cut(s) 71, 134, 231, 590, 623
Hin6I GCGC 2 cut(s) 192, 257
HinP1I GCGC 2 cut(s) 192, 257
HindIII AAGCTT 1 cut(s) 717
HinfI GANTC 7 cut(s) 84, 295, 357, 388, 464, 635, 1016
HpaII CCGG 3 cut(s) 326, 334, 554
HphI GGTGA 1 cut(s) 185
Hpy188I TCNGA 5 cut(s) 60, 117, 387, 525, 634
Hpy188III TCNNGA 3 cut(s) 68, 104, 706
Hpy99I CGWCG 3 cut(s) 384, 387, 613
HpyAV CCTTC 5 cut(s) 176, 549, 988, 1004, 1037
HpyCH4III ACNGT 2 cut(s) 64, 667
HpyCH4IV ACGT 3 cut(s) 582, 841, 953
HpyCH4V TGCA 9 cut(s) 404, 479, 499, 574, 586, 623, 680, 760, 937
HpyF10VI GCNNNNNNNGC 4 cut(s) 200, 428, 757, 893
HpyF3I CTNAG 2 cut(s) 639, 900
HpySE526I ACGT 3 cut(s) 582, 841, 953
Hsp92I GRCGYC 1 cut(s) 953
Hsp92II CATG 5 cut(s) 71, 134, 231, 590, 623
HspAI GCGC 2 cut(s) 192, 257
KpnI GGTACC 1 cut(s) 554
Kzo9I GATC 8 cut(s) 36, 79, 100, 112, 269, 319, 416, 520
LmnI GCTCC 2 cut(s) 168, 688
Lsp1109I GCAGC 5 cut(s) 17, 463, 483, 491, 949
LweI GCATC 2 cut(s) 61, 516
MaeI CTAG 2 cut(s) 755, 786
MaeII ACGT 3 cut(s) 582, 841, 953
MalI GATC 8 cut(s) 38, 81, 102, 114, 271, 321, 418, 522
MboI GATC 8 cut(s) 36, 79, 100, 112, 269, 319, 416, 520
MboII GAAGA 3 cut(s) 239, 694, 886
MflI RGATCY 3 cut(s) 269, 416, 520
MhlI GDGCHC 1 cut(s) 127
MluCI AATT 3 cut(s) 95, 285, 733
MlyI GAGTC 3 cut(s) 473, 644, 1025
MmeI TCCRAC 3 cut(s) 201, 365, 612
MseI TTAA 5 cut(s) 18, 48, 284, 864, 1045
MslI CAYNNNNRTG 2 cut(s) 591, 945
MspI CCGG 3 cut(s) 326, 334, 554
MspR9I CCNGG 1 cut(s) 870
MvaI CCWGG 1 cut(s) 870
MvnI CGCG 1 cut(s) 194
MwoI GCNNNNNNNGC 4 cut(s) 200, 428, 757, 893
NdeII GATC 8 cut(s) 36, 79, 100, 112, 269, 319, 416, 520
NlaIII CATG 5 cut(s) 71, 134, 231, 590, 623
NlaIV GGNNCC 5 cut(s) 207, 552, 652, 726, 972
NspI RCATGY 1 cut(s) 623
PagI TCATGA 1 cut(s) 67
PceI AGGCCT 1 cut(s) 454
PcsI WCGNNNNNNNCGW 1 cut(s) 479
PfeI GAWTC 4 cut(s) 84, 295, 357, 388
PkrI GCNGC 7 cut(s) 7, 433, 478, 481, 498, 850, 939
PleI GAGTC 3 cut(s) 472, 643, 1024
PpsI GAGTC 3 cut(s) 472, 643, 1024
Psp6I CCWGG 1 cut(s) 868
PspFI CCCAGC 1 cut(s) 892
PspGI CCWGG 1 cut(s) 868
PspN4I GGNNCC 5 cut(s) 207, 552, 652, 726, 972
PspPI GGNCC 3 cut(s) 137, 651, 797
PstI CTGCAG 2 cut(s) 481, 501
PstNI CAGNNNCTG 3 cut(s) 11, 800, 899
PsuI RGATCY 3 cut(s) 269, 416, 520
RsaI GTAC 5 cut(s) 25, 537, 552, 664, 835
RsaNI GTAC 5 cut(s) 24, 536, 551, 663, 834
RseI CAYNNNNRTG 2 cut(s) 591, 945
SaqAI TTAA 5 cut(s) 18, 48, 284, 864, 1045
SatI GCNGC 7 cut(s) 6, 432, 477, 480, 497, 849, 938
Sau3AI GATC 8 cut(s) 36, 79, 100, 112, 269, 319, 416, 520
Sau96I GGNCC 3 cut(s) 137, 651, 797
SchI GAGTC 3 cut(s) 473, 644, 1025
ScrFI CCNGG 1 cut(s) 870
SduI GDGCHC 1 cut(s) 127
SfaNI GCATC 2 cut(s) 61, 516
SfcI CTRYAG 3 cut(s) 148, 477, 497
SmiMI CAYNNNNRTG 2 cut(s) 591, 945
Sse9I AATT 3 cut(s) 95, 285, 733
SseBI AGGCCT 1 cut(s) 454
SsiI CCGC 4 cut(s) 194, 203, 432, 848
SspMI CTAG 2 cut(s) 755, 786
StuI AGGCCT 1 cut(s) 454
StyD4I CCNGG 1 cut(s) 868
StyI CCWWGG 1 cut(s) 140
TaaI ACNGT 2 cut(s) 64, 667
TaiI ACGT 3 cut(s) 585, 844, 956
TaqI TCGA 4 cut(s) 35, 82, 293, 770
TasI AATT 3 cut(s) 95, 285, 733
TatI WGTACW 1 cut(s) 662
TauI GCSGC 2 cut(s) 434, 851
TfiI GAWTC 4 cut(s) 84, 295, 357, 388
Tru1I TTAA 5 cut(s) 18, 48, 284, 864, 1045
Tru9I TTAA 5 cut(s) 18, 48, 284, 864, 1045
TseI GCWGC 5 cut(s) 5, 476, 479, 496, 937
TspDTI ATGAA 3 cut(s) 56, 119, 930
TspGWI ACGGA 1 cut(s) 350
XceI RCATGY 1 cut(s) 623
XspI CTAG 2 cut(s) 755, 786
ZraI GACGTC 1 cut(s) 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.