Prupe.7G138700_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000039
Physical Location & Seq
Reverse (-)
15499038 .. 15502863
3826 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G138700.1

Sequence Viewer

Length: 2355 bp
ATGTTTAAAACCCACCTCAGAAATCTCAAATTCACCATGGACTCTTTTCAGCAAGTGGATGAAGACGTAAGACAACATCCCAACATATTGTTTCGCCCCATCCCGGGCCTAGAAAGGTTTAGGATCCAAATGAAGAAGGGCGTTCAGCTCGTTGACAAGTGCTCCAAGGTTCGTCCATGGAAGTTAAACGCTTTCAAAAAGCCTATTTACACCAGCAAACTTGTTGCATTGAATGCATCTCTCAATACACTGTTAAGTGTACTGACAGTGCACATAATAAGTGATACGAGGGCTCGGGTAATCGATGTGGCTACAACATTGAACCAAATCGATGCGAATATTGTGGCACAATATCAAAATCAAAATCAAGGTTGGTGTGCAATACCTGAGCCTCCACCCTTTACTGTTGGATTGGATGTGCATGTGGAGGAGTTGAAGATGGAGCTTCTTAAAGACGAGGCATCAATGCTTGTGGTGACTGGTCTTGGAGGATGCGGGAAAACCACACTGGCACAAATGATTTGCAAAGATCAGAAAGTCAAAGAAAAATTCAAAGGCAATCTCTTTTTCGTCATTGTTTCAAAGAAGTCCAACTGCCTTGTTGTACAAGAACTATGTCGAAAAACAGGATCCCTGGTACCTTCTTTCCAAGAAGAAGCAATTGCATTTAACTGGCTGCAAGAATTTCTGAATACAATAGGACAAGATCCTCTACTTTTGGTCCTGGATGACGTGTCGCCGGGATCAGACTCCCTTCTTGATAAGCTTGATGAATTCAAAAGACCAAATCACAACATTTTGGTGACATCAAGAGTTCAATTTCCAAGATTTGGTCCTGCCTATCTTTTAGGAACATTGGAACCAGGAGATGCAATGACACTTTTTCGTCATTCAGCATCCCGGTCTGATAGGAGCTCTTATATACCAGACAATCTAGCGGAACAGATAGTACAGCACTGTAAGGGATTTCCACTTGCCATTACAACGATCGGAAGATCAGTTTGCGAGCAGCCTACAGAGATCTGGGAGAAAAGAGTAACGGAATTGTCTAAAGGCTCTTCTATTCTTGATTCTGAGGATTATTTGCTTGCTTGCCTCCAAAGTAGCTTAGATGCCTTGGATGAACGAATGCCTATCATTAAGGAATGCTTCATTGACCTTGCTTTATTTCCTGAACACCGAAGTATCCCTGCTGTTGCTCTCATTGATATGTGGGCAGAATTATATGGACTAGATAAGGATTCTTGGTCCATTGCGAACATCCACGAGCTTACCAATCGTAATTTGGCGAATCTAGTCACAAGGAATGGGAAGACGGAGATCGATGGCTATTATAGTGAACACTTTGTTACTCAGCATGATATGCTTAGAAATCTAGCTATCCATCAGATTGGTCAAGATGAAATAGGAAAGGAAAAAAGGCTGATTATAGATATTTGTAGTGACAATCTCCCTAAGTGGTGGACAGAACAGAAGAATAAACCCAAGAAGACCCGCTTATTATCTATCTCAACTGATGGATTGTCCTCGGAAAAGTGGCACGACATGCATCTACCAAAGGCTGAGGTTCTAGTTCTTAATTTTCAGACAGAGAACTATGGTCTGCCCAAGTTCGTGAAGAAAATGTCCAAGTTGAAGGTTCTAATAGTCACAAATTATGGTGTCTTACAAGCTGACTTGAGTAATTTCAAGCTTTTGGGTTCTTTGGCTAATCTGAAGAGAATAAGATTAGAGCGCATTTCAATTCCTTCCATAAGGAAGAACTCCATGCAGTTGAAGAGTCTGCAGAAGATATCTTTATTCATGTGCAGCATCGGTCAAGCTTTTAGCAACTCTTCCATCCAAATCTTAGAGGCATTTCCAAATCTAGTGGAATTGAACATTGACTACTGCGATGATTTGGTGGAATTGCCTGTCAAGATCTGTGATCTTATCCGCCTAAAGAAGCTCAGTATTACCAATTGCCATAAGCTATCTAGCTTGCCTGAAGAGATTGGAAAGCTAGAGGGTTTAGAGGTATTGAGGCTGAGGTCCTGCACAGACTTGGTAAAACTTCCAGGCTCCATTAAGGACCTCACTAAGTTACACTTGCTTGACATATATAAATGTTTCAGCATCAAGGAGTTGCCTGAAGACATTGGTGAAATGAGTGGTTTAGAAAAAATAAACATAGGACAATGCTCAAGATTGCAAGAGTTGCCTGTATCAGTTTTGAATCTTGGGGAGTTACGGGAAGTGATATGTGATGATTACACAGAAAACTTATGGGGGGAACCTTTCAAATCCAATCTCACAAAGATAAAGATATCGGTGGTAAAAGAAGACTTCAACCTGAATTGGCTCCACAATCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

785

Amino Acids

88.99

Weight (kDa)

6.98

Isoelectric Point (pI)

40.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000039)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G66890 AT5G66900 AT5G66900 AT5G66900 AT5G66910
fragaria_vesca FvH4_1g15090 FvH4_1g15120 FvH4_1g15130 FvH4_1g15140 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15160 FvH4_1g15170 FvH4_1g15171 FvH4_1g15171 FvH4_1g15200 FvH4_1g15200 FvH4_1g15200 FvH4_1g15210 FvH4_1g15210 FvH4_1g15210 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15220 FvH4_1g15230 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15240 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15330 FvH4_1g15500 FvH4_1g15500 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_1g17470 FvH4_2g19760 FvH4_3g12820 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_4g31860 FvH4_6g18970 FvH4_6g42370 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g42380 FvH4_6g50100 FvH4_6g50100 FvH4_6g50110 FvH4_6g50130 FvH4_6g50140 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50310 FvH4_6g50330
malus_domestica MD00G1053700.v1.1 MD02G1164300.v1.1 MD02G1164400.v1.1 MD02G1164700.v1.1 MD02G1164800.v1.1 MD02G1165300.v1.1 MD02G1165400.v1.1 MD02G1165500.v1.1 MD02G1165600.v1.1 MD02G1165900.v1.1 MD02G1166000.v1.1 MD02G1166100.v1.1 MD02G1166300.v1.1 MD08G1084900.v1.1 MD15G1263100.v1.1 MD15G1263300.v1.1 MD15G1276900.v1.1 MD15G1277200.v1.1 MD15G1277400.v1.1 MD15G1277700.v1.1 MD15G1277800.v1.1 MD15G1278000.v1.1 MD15G1278100.v1.1 MD15G1278400.v1.1 MD15G1278600.v1.1
prunus_persica Prupe.7G138500_v2.0.a1 Prupe.7G138500_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138600_v2.0.a1 Prupe.7G138700_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138800_v2.0.a1 Prupe.7G138900_v2.0.a1 Prupe.7G139100_v2.0.a1 Prupe.7G139200_v2.0.a1 Prupe.7G139500_v2.0.a1 Prupe.7G139600_v2.0.a1 Prupe.7G139700_v2.0.a1 Prupe.7G139800_v2.0.a1
pyrus_communis pycom02g13150 pycom02g13160 pycom02g13190 pycom02g13200 pycom02g13220 pycom02g13230 pycom02g13250 pycom02g13260 pycom02g13270 pycom02g13300 pycom02g13310 pycom02g13330 pycom15g23980 pycom15g23990 pycom15g24030 pycom15g24040 pycom15g24050 pycom15g24070 pycom15g24090 pycom15g24160
rosa_chinensis RchiOBHm_Chr1g0326431 RchiOBHm_Chr1g0326451 RchiOBHm_Chr2g0104121 RchiOBHm_Chr2g0104151 RchiOBHm_Chr2g0104171 RchiOBHm_Chr2g0104181 RchiOBHm_Chr2g0104191 RchiOBHm_Chr2g0104201 RchiOBHm_Chr2g0104211 RchiOBHm_Chr2g0104241 RchiOBHm_Chr2g0104261 RchiOBHm_Chr2g0104281 RchiOBHm_Chr2g0104311 RchiOBHm_Chr2g0104331 RchiOBHm_Chr2g0104361 RchiOBHm_Chr2g0104381 RchiOBHm_Chr2g0104391 RchiOBHm_Chr2g0104431 RchiOBHm_Chr2g0104441 RchiOBHm_Chr2g0104541 RchiOBHm_Chr2g0104611 RchiOBHm_Chr2g0104741 RchiOBHm_Chr2g0104761 RchiOBHm_Chr2g0158291 RchiOBHm_Chr2g0170371 RchiOBHm_Chr2g0170631 RchiOBHm_Chr3g0473971 RchiOBHm_Chr3g0480491 RchiOBHm_Chr3g0480541 RchiOBHm_Chr3g0480561 RchiOBHm_Chr3g0485281 RchiOBHm_Chr3g0485291 RchiOBHm_Chr4g0411541 RchiOBHm_Chr6g0285471
rosa_laevigata RLG00000008347 RLG00000012637 RLG00000016961 RLG00000017293 RLG00000017305 RLG00000017308 RLG00000017312 RLG00000017314 RLG00000017317 RLG00000017318 RLG00000017319 RLG00000017321 RLG00000017322 RLG00000017323 RLG00000017324 RLG00000017325 RLG00000017327 RLG00000017328 RLG00000017329 RLG00000017330 RLG00000017334 RLG00000020833 RLG00000021073 RLG00000021950 RLG00000021971 RLG00000023154 RLG00000023157 RLG00000023467 RLG00000023468 RLG00000023525 RLG00000023963 RLG00000033265 RLG00000033267 RLG00000033268
rosa_multiflora Rmu_co8053082.1_g000001 Rmu_co8210358.1_g000001 Rmu_co8331661.1_g000001 Rmu_co8477427.1_g000002 Rmu_co8483217.1_g000001 Rmu_sc0000284.1_g000004 Rmu_sc0000676.1_g000017 Rmu_sc0000676.1_g000019 Rmu_sc0000676.1_g000021 Rmu_sc0002205.1_g000038 Rmu_sc0002205.1_g000041 Rmu_sc0002316.1_g000010 Rmu_sc0002316.1_g000012 Rmu_sc0002316.1_g000040 Rmu_sc0002316.1_g000071 Rmu_sc0002316.1_g000072 Rmu_sc0002316.1_g000095 Rmu_sc0002316.1_g000102 Rmu_sc0002414.1_g000018 Rmu_sc0002576.1_g000002 Rmu_sc0002576.1_g000003 Rmu_sc0002687.1_g000010 Rmu_sc0002687.1_g000017 Rmu_sc0003660.1_g000001 Rmu_sc0003787.1_g000014 Rmu_sc0003787.1_g000020 Rmu_sc0003787.1_g000024 Rmu_sc0003787.1_g000029 Rmu_sc0004059.1_g000026 Rmu_sc0005137.1_g000021 Rmu_sc0006550.1_g000001 Rmu_sc0006561.1_g000025 Rmu_sc0006561.1_g000033 Rmu_sc0007704.1_g000005 Rmu_sc0008904.1_g000005 Rmu_sc0010270.1_g000002 Rmu_sc0010307.1_g000001 Rmu_sc0011601.1_g000013 Rmu_sc0012694.1_g000005 Rmu_sc0013101.1_g000008 Rmu_sc0019029.1_g000001 Rmu_sc0019728.1_g000001 Rmu_sc0025829.1_g000001 Rmu_sc0025829.1_g000002 Rmu_ssc0000257.1_g000007 Rmu_ssc0000257.1_g000008
rosa_roxburghii Rroxscaffold_1G00021710 Rroxscaffold_1G00049350 Rroxscaffold_1G00049360 Rroxscaffold_2G00081160 Rroxscaffold_2G00081360 Rroxscaffold_2G00081390 Rroxscaffold_2G00091540 Rroxscaffold_2G00138790 Rroxscaffold_2G00138800 Rroxscaffold_2G00138920 Rroxscaffold_2G00139000 Rroxscaffold_2G00139010 Rroxscaffold_2G00139020 Rroxscaffold_2G00139030 Rroxscaffold_2G00139040 Rroxscaffold_2G00139050 Rroxscaffold_2G00139060 Rroxscaffold_2G00139070 Rroxscaffold_2G00139090 Rroxscaffold_2G00139100 Rroxscaffold_3G00257470 Rroxscaffold_4G00318040 Rroxscaffold_4G00323740 Rroxscaffold_4G00323750 Rroxscaffold_5G00356140 Rroxscaffold_6G00401280 Rroxscaffold_6G00401290 Rroxscaffold_7G00183120
rosa_rugosa Rorug01G0060500 Rorug01G0060900 Rorug02G0119500 Rorug02G0119600 Rorug02G0119700 Rorug02G0119700 Rorug02G0119700 Rorug02G0119800.1 Rorug02G0119900.1 Rorug02G0120000 Rorug02G0120100 Rorug02G0120200 Rorug02G0120300 Rorug02G0120400 Rorug02G0120500 Rorug02G0120700 Rorug02G0120700 Rorug02G0122300 Rorug02G0122300 Rorug02G0122400.1 Rorug02G0466700 Rorug02G0466700 Rorug02G0466800 Rorug02G0548600 Rorug02G0549900 Rorug02G0550000 Rorug03G0184200 Rorug04G0107900 Rorug05G0121500 Rorug06G0174800
rosa_samantha Rh1AG198400 Rh1CG074700 Rh1CG075000 Rh1CG183700 Rh2AG169700 Rh2AG169800 Rh2AG169900 Rh2AG170000 Rh2AG170300 Rh2AG170400 Rh2AG171000 Rh2AG171100 Rh2AG171600 Rh2AG172400 Rh2AG172500 Rh2AG532900 Rh2AG620000 Rh2AG622500 Rh2AG622800 Rh2AG623000 Rh2BG176200 Rh2BG176300 Rh2BG176400 Rh2BG176500 Rh2BG176600 Rh2BG176900 Rh2BG177000 Rh2BG177100 Rh2BG177200 Rh2BG177300 Rh2BG177600 Rh2BG177700 Rh2BG177900 Rh2BG178000 Rh2BG178200 Rh2BG178300 Rh2BG178500 Rh2BG179000 Rh2BG180000 Rh2BG180100 Rh2BG259200 Rh2BG546700 Rh2BG630800 Rh2BG633500 Rh2CG176500 Rh2CG177500 Rh2CG177700 Rh2DG174400 Rh2DG174600 Rh2DG174900 Rh2DG175100 Rh2DG175200 Rh2DG175300 Rh2DG175600 Rh2DG175700 Rh2DG175800 Rh2DG175900 Rh2DG176000 Rh2DG176300 Rh2DG176400 Rh2DG176500 Rh2DG176600 Rh2DG176900 Rh2DG177100 Rh2DG177200 Rh2DG177800 Rh2DG177900 Rh2DG178700 Rh2DG178800 Rh2DG555700 Rh2DG643700 Rh2DG646300 Rh3AG235600 Rh3AG235900 Rh3AG236200 Rh3AG266700 Rh3AG266900 Rh3BG216200 Rh3BG269100 Rh3CG212700 Rh3CG265800 Rh4AG168900 Rh4BG165500 Rh4CG180300 Rh5BG261500 Rh6AG286300 Rh6BG287500 Rh6CG288600 Rh7AG022600
rosa_wichuraiana Rw0G008240 Rw0G008250 Rw0G013190 Rw0G013200 Rw2G013230 Rw2G013240 Rw2G013270 Rw2G013280 Rw2G013290 Rw2G013300 Rw2G013330 Rw2G013340 Rw2G013350 Rw2G013360 Rw2G013370 Rw2G013380 Rw2G013410 Rw2G013570 Rw2G044120 Rw2G051370 Rw2G051590 Rw3G017160 Rw3G021150 Rw3G021160 Rw3G023730 Rw3G023740 Rw4G014030 Rw6G024590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 637
AccB1I GGYRCC 1 cut(s) 637
AccB7I CCANNNNNTGG 1 cut(s) 830
AciI CCGC 4 cut(s) 495, 938, 1495, 1936
AclWI GGATC 6 cut(s) 118, 131, 624, 637, 701, 751
AcsI RAATTY 4 cut(s) 29, 548, 683, 773
AcuI CTGAAG 3 cut(s) 1736, 2007, 2151
AfaI GTAC 4 cut(s) 261, 606, 639, 951
AfiI CCNNNNNNNGG 3 cut(s) 103, 104, 830
AflIII ACRYGT 1 cut(s) 732
AjiI CACGTC 1 cut(s) 733
AjnI CCWGG 4 cut(s) 633, 723, 862, 2056
Alw21I GWGCWC 3 cut(s) 164, 273, 917
Alw44I GTGCAC 1 cut(s) 269
AlwI GGATC 6 cut(s) 118, 131, 624, 637, 701, 751
Ama87I CYCGRG 2 cut(s) 103, 294
AoxI GGCC 1 cut(s) 106
ApaLI GTGCAC 1 cut(s) 269
ApeKI GCWGC 3 cut(s) 676, 1009, 1809
ApoI RAATTY 4 cut(s) 29, 548, 683, 773
Asp718I GGTACC 1 cut(s) 637
AspLEI GCGC 1 cut(s) 1737
AspS9I GGNCC 6 cut(s) 106, 721, 833, 1248, 2031, 2071
AsuC2I CCSGG 4 cut(s) 104, 105, 741, 901
AsuHPI GGTGA 4 cut(s) 25, 487, 814, 2153
AvaI CYCGRG 2 cut(s) 103, 294
AvaII GGWCC 5 cut(s) 721, 833, 1248, 2031, 2071
BaeGI GKGCMC 1 cut(s) 273
BaeI ACNNNNGTAYC 2 cut(s) 1168, 1201
BamHI GGATCC 2 cut(s) 123, 629
BanI GGYRCC 1 cut(s) 637
BanII GRGCYC 2 cut(s) 295, 917
BauI CACGAG 1 cut(s) 1265
BbsI GAAGAC 5 cut(s) 69, 1319, 1496, 2139, 2328
Bbv12I GWGCWC 3 cut(s) 164, 273, 917
BbvCI CCTCAGC 2 cut(s) 1563, 2027
BbvI GCAGC 3 cut(s) 663, 1021, 1821
BccI CCATC 6 cut(s) 107, 433, 1319, 1392, 1511, 1847
BciT130I CCWGG 4 cut(s) 635, 725, 864, 2058
BciVI GTATCC 1 cut(s) 1196
BcnI CCSGG 4 cut(s) 104, 105, 741, 901
BfaI CTAG 9 cut(s) 110, 935, 1232, 1295, 1376, 1571, 1868, 1977, 2003
BfmI CTRYAG 2 cut(s) 1014, 1784
BfuI GTATCC 1 cut(s) 1196
BglII AGATCT 2 cut(s) 1020, 1920
BisI GCNGC 3 cut(s) 677, 1010, 1810
BlsI GCNGC 3 cut(s) 678, 1011, 1811
Bme1390I CCNGG 8 cut(s) 104, 105, 635, 725, 741, 864, 901, 2058
Bme18I GGWCC 5 cut(s) 721, 833, 1248, 2031, 2071
BmeT110I CYCGRG 2 cut(s) 103, 294
BmgBI CACGTC 1 cut(s) 733
BmgT120I GGNCC 6 cut(s) 106, 721, 833, 1248, 2031, 2071
BmiI GGNNCC 7 cut(s) 125, 631, 639, 861, 2062, 2274, 2342
BmrFI CCNGG 8 cut(s) 104, 105, 635, 725, 741, 864, 901, 2058
BpiI GAAGAC 5 cut(s) 69, 1319, 1496, 2139, 2328
Bpu10I CCTNAGC 3 cut(s) 387, 1563, 2027
BpuEI CTTGAG 2 cut(s) 1699, 2167
BpuMI CCSGG 4 cut(s) 104, 105, 741, 901
Bsa29I ATCGAT 3 cut(s) 303, 330, 1323
BsaJI CCNNGG 7 cut(s) 36, 103, 165, 176, 633, 1116, 1527
BsaXI ACNNNNNCTCC 2 cut(s) 146, 176
Bsc4I CCNNNNNNNGG 3 cut(s) 103, 104, 830
Bse1I ACTGG 3 cut(s) 484, 513, 677
Bse3DI GCAATG 2 cut(s) 879, 1251
BseBI CCWGG 4 cut(s) 635, 725, 864, 2058
BseCI ATCGAT 3 cut(s) 303, 330, 1323
BseDI CCNNGG 7 cut(s) 36, 103, 165, 176, 633, 1116, 1527
BseLI CCNNNNNNNGG 3 cut(s) 103, 104, 830
BseMI GCAATG 2 cut(s) 879, 1251
BseMII CTCAG 7 cut(s) 31, 378, 1065, 1367, 1554, 1963, 2018
BseNI ACTGG 3 cut(s) 484, 513, 677
BseRI GAGGAG 1 cut(s) 443
BseSI GKGCMC 1 cut(s) 273
BseXI GCAGC 3 cut(s) 663, 1021, 1821
BsgI GTGCAG 2 cut(s) 1828, 2020
Bsh1285I CGRYCG 1 cut(s) 990
BshFI GGCC 1 cut(s) 108
BshNI GGYRCC 1 cut(s) 637
BshVI ATCGAT 3 cut(s) 303, 330, 1323
BsiEI CGRYCG 1 cut(s) 990
BsiHKAI GWGCWC 3 cut(s) 164, 273, 917
BsiHKCI CYCGRG 2 cut(s) 103, 294
BsiSI CCGG 3 cut(s) 104, 740, 901
BslI CCNNNNNNNGG 3 cut(s) 103, 104, 830
BsmI GAATGC 3 cut(s) 238, 1134, 1151
BsnI GGCC 1 cut(s) 108
BsoBI CYCGRG 2 cut(s) 103, 294
Bsp1286I GDGCHC 4 cut(s) 164, 273, 295, 917
Bsp1407I TGTACA 1 cut(s) 604
Bsp19I CCATGG 2 cut(s) 36, 176
BspACI CCGC 4 cut(s) 495, 938, 1495, 1936
BspANI GGCC 1 cut(s) 108
BspCNI CTCAG 7 cut(s) 30, 379, 1066, 1366, 1555, 1962, 2019
BspDI ATCGAT 3 cut(s) 303, 330, 1323
BspLI GGNNCC 7 cut(s) 125, 631, 639, 861, 2062, 2274, 2342
BspMAI CTGCAG 1 cut(s) 1788
BspPI GGATC 6 cut(s) 118, 131, 624, 637, 701, 751
BspQI GCTCTTC 1 cut(s) 1063
BspT107I GGYRCC 1 cut(s) 637
BsrDI GCAATG 2 cut(s) 879, 1251
BsrGI TGTACA 1 cut(s) 604
BsrI ACTGG 3 cut(s) 484, 513, 677
BssECI CCNNGG 7 cut(s) 36, 103, 165, 176, 633, 1116, 1527
BssSI CACGAG 1 cut(s) 1265
BssT1I CCWWGG 4 cut(s) 36, 165, 176, 1116
Bst2BI CACGAG 1 cut(s) 1265
Bst2UI CCWGG 4 cut(s) 635, 725, 864, 2058
Bst4CI ACNGT 4 cut(s) 252, 268, 406, 959
Bst6I CTCTTC 5 cut(s) 1063, 1712, 1772, 1840, 1983
BstAPI GCANNNNNTGC 4 cut(s) 233, 1363, 1546, 2197
BstAUI TGTACA 1 cut(s) 604
BstC8I GCNNGC 4 cut(s) 1007, 1089, 1093, 1982
BstDSI CCRYGG 2 cut(s) 36, 176
BstHHI GCGC 1 cut(s) 1737
BstMCI CGRYCG 1 cut(s) 990
BstMWI GCNNNNNNNGC 4 cut(s) 233, 1363, 1546, 2197
BstNI CCWGG 4 cut(s) 635, 725, 864, 2058
BstNSI RCATGY 2 cut(s) 425, 1549
BstSCI CCNGG 8 cut(s) 102, 103, 633, 723, 739, 862, 899, 2056
BstSFI CTRYAG 2 cut(s) 1014, 1784
BstSLI GKGCMC 1 cut(s) 273
BstV1I GCAGC 3 cut(s) 663, 1021, 1821
BstV2I GAAGAC 5 cut(s) 69, 1319, 1496, 2139, 2328
BstX2I RGATCY 5 cut(s) 123, 629, 706, 1020, 1920
BstXI CCANNNNNNTGG 1 cut(s) 1391
BstYI RGATCY 5 cut(s) 123, 629, 706, 1020, 1920
Bsu15I ATCGAT 3 cut(s) 303, 330, 1323
BsuI GTATCC 1 cut(s) 1196
BsuRI GGCC 1 cut(s) 108
BsuTUI ATCGAT 3 cut(s) 303, 330, 1323
BtgI CCRYGG 2 cut(s) 36, 176
BtgZI GCGATG 1 cut(s) 1908
BtrI CACGTC 1 cut(s) 733
BtsIMutI CAGTG 4 cut(s) 248, 273, 506, 955
Cac8I GCNNGC 4 cut(s) 1007, 1089, 1093, 1982
CfoI GCGC 1 cut(s) 1737
Cfr13I GGNCC 6 cut(s) 106, 721, 833, 1248, 2031, 2071
Cfr9I CCCGGG 1 cut(s) 103
ClaI ATCGAT 3 cut(s) 303, 330, 1323
Csp6I GTAC 4 cut(s) 260, 605, 638, 950
CspCI CAANNNNNGTGG 5 cut(s) 453, 488, 1851, 1886, 2333
CviAII CATG 7 cut(s) 37, 177, 422, 1358, 1546, 1768, 1804
CviQI GTAC 4 cut(s) 260, 605, 638, 950
DraI TTTAAA 1 cut(s) 7
Eam1104I CTCTTC 5 cut(s) 1063, 1712, 1772, 1840, 1983
EarI CTCTTC 5 cut(s) 1063, 1712, 1772, 1840, 1983
EciI GGCGGA 1 cut(s) 1925
Ecl136II GAGCTC 1 cut(s) 915
Eco130I CCWWGG 4 cut(s) 36, 165, 176, 1116
Eco24I GRGCYC 2 cut(s) 295, 917
Eco32I GATATC 2 cut(s) 1794, 2307
Eco47I GGWCC 5 cut(s) 721, 833, 1248, 2031, 2071
Eco53kI GAGCTC 1 cut(s) 915
Eco57I CTGAAG 3 cut(s) 1736, 2007, 2151
Eco88I CYCGRG 2 cut(s) 103, 294
EcoICRI GAGCTC 1 cut(s) 915
EcoO109I RGGNCCY 2 cut(s) 2031, 2071
EcoRI GAATTC 1 cut(s) 773
EcoRII CCWGG 4 cut(s) 633, 723, 862, 2056
EcoRV GATATC 2 cut(s) 1794, 2307
EcoT14I CCWWGG 4 cut(s) 36, 165, 176, 1116
EcoT22I ATGCAT 2 cut(s) 238, 1551
EcoT38I GRGCYC 2 cut(s) 295, 917
ErhI CCWWGG 4 cut(s) 36, 165, 176, 1116
FaeI CATG 7 cut(s) 40, 180, 425, 1361, 1549, 1771, 1807
FalI AAGNNNNNCTT 6 cut(s) 1133, 1165, 1481, 1513, 2072, 2104
FatI CATG 7 cut(s) 36, 176, 421, 1357, 1545, 1767, 1803
FauI CCCGC 2 cut(s) 488, 1502
Fnu4HI GCNGC 3 cut(s) 677, 1010, 1810
FriOI GRGCYC 2 cut(s) 295, 917
Fsp4HI GCNGC 3 cut(s) 677, 1010, 1810
FspBI CTAG 9 cut(s) 110, 935, 1232, 1295, 1376, 1571, 1868, 1977, 2003
GlaI GCGC 1 cut(s) 1736
GluI GCNGC 3 cut(s) 677, 1010, 1810
HaeIII GGCC 1 cut(s) 108
HapII CCGG 3 cut(s) 104, 740, 901
HhaI GCGC 1 cut(s) 1737
Hin1II CATG 7 cut(s) 40, 180, 425, 1361, 1549, 1771, 1807
Hin6I GCGC 1 cut(s) 1735
HinP1I GCGC 1 cut(s) 1735
HincII GTYRAC 1 cut(s) 154
HindII GTYRAC 1 cut(s) 154
HindIII AAGCTT 3 cut(s) 764, 1691, 1821
HinfI GANTC 7 cut(s) 41, 749, 1070, 1241, 1291, 1780, 2215
HpaII CCGG 3 cut(s) 104, 740, 901
HphI GGTGA 4 cut(s) 25, 487, 814, 2153
Hpy166II GTNNAC 5 cut(s) 154, 260, 271, 1340, 1464
Hpy188III TCNNGA 8 cut(s) 758, 810, 1067, 1172, 1397, 1615, 1918, 2184
Hpy8I GTNNAC 5 cut(s) 154, 260, 271, 1340, 1464
HpyAV CCTTC 5 cut(s) 130, 651, 764, 1630, 1758
HpyCH4III ACNGT 4 cut(s) 252, 268, 406, 959
HpyCH4IV ACGT 2 cut(s) 66, 732
HpyF10VI GCNNNNNNNGC 4 cut(s) 233, 1363, 1546, 2197
HpySE526I ACGT 2 cut(s) 66, 732
Hsp92II CATG 7 cut(s) 40, 180, 425, 1361, 1549, 1771, 1807
HspAI GCGC 1 cut(s) 1735
KpnI GGTACC 1 cut(s) 641
LguI GCTCTTC 1 cut(s) 1063
LmnI GCTCC 5 cut(s) 167, 442, 912, 2066, 2346
Lsp1109I GCAGC 3 cut(s) 663, 1021, 1821
MaeI CTAG 9 cut(s) 110, 935, 1232, 1295, 1376, 1571, 1868, 1977, 2003
MaeII ACGT 2 cut(s) 66, 732
MaeIII GTNAC 9 cut(s) 475, 802, 1036, 1297, 1348, 1442, 1648, 2082, 2226
MfeI CAATTG 2 cut(s) 660, 1960
MflI RGATCY 5 cut(s) 123, 629, 706, 1020, 1920
MhlI GDGCHC 4 cut(s) 164, 273, 295, 917
MlyI GAGTC 3 cut(s) 35, 743, 1789
MmeI TCCRAC 2 cut(s) 388, 615
Mph1103I ATGCAT 2 cut(s) 238, 1551
MseI TTAA 8 cut(s) 6, 185, 254, 450, 669, 1140, 1578, 2067
MslI CAYNNNNRTG 2 cut(s) 800, 1208
MspI CCGG 3 cut(s) 104, 740, 901
MspR9I CCNGG 8 cut(s) 104, 105, 635, 725, 741, 864, 901, 2058
MunI CAATTG 2 cut(s) 660, 1960
Mva1269I GAATGC 3 cut(s) 238, 1134, 1151
MvaI CCWGG 4 cut(s) 635, 725, 864, 2058
MwoI GCNNNNNNNGC 4 cut(s) 233, 1363, 1546, 2197
NciI CCSGG 4 cut(s) 104, 105, 741, 901
NcoI CCATGG 2 cut(s) 36, 176
NlaIII CATG 7 cut(s) 40, 180, 425, 1361, 1549, 1771, 1807
NlaIV GGNNCC 7 cut(s) 125, 631, 639, 861, 2062, 2274, 2342
NmuCI GTSAC 5 cut(s) 475, 802, 1297, 1442, 1648
NsiI ATGCAT 2 cut(s) 238, 1551
NspI RCATGY 2 cut(s) 425, 1549
PciSI GCTCTTC 1 cut(s) 1063
PctI GAATGC 3 cut(s) 238, 1134, 1151
PfeI GAWTC 4 cut(s) 1070, 1241, 1291, 2215
PflMI CCANNNNNTGG 1 cut(s) 830
PfoI TCCNGGA 1 cut(s) 723
PkrI GCNGC 3 cut(s) 678, 1011, 1811
Ple19I CGATCG 1 cut(s) 990
PleI GAGTC 3 cut(s) 35, 743, 1788
PpsI GAGTC 3 cut(s) 35, 743, 1788
PpuMI RGGWCCY 2 cut(s) 2031, 2071
Psp124BI GAGCTC 1 cut(s) 917
Psp5II RGGWCCY 2 cut(s) 2031, 2071
Psp6I CCWGG 4 cut(s) 633, 723, 862, 2056
PspGI CCWGG 4 cut(s) 633, 723, 862, 2056
PspN4I GGNNCC 7 cut(s) 125, 631, 639, 861, 2062, 2274, 2342
PspPI GGNCC 6 cut(s) 106, 721, 833, 1248, 2031, 2071
PspPPI RGGWCCY 2 cut(s) 2031, 2071
PsrI GAACNNNNNNTAC 4 cut(s) 933, 965, 1871, 1903
PstI CTGCAG 1 cut(s) 1788
PsuI RGATCY 5 cut(s) 123, 629, 706, 1020, 1920
PvuI CGATCG 1 cut(s) 990
RsaI GTAC 4 cut(s) 261, 606, 639, 951
RsaNI GTAC 4 cut(s) 260, 605, 638, 950
RseI CAYNNNNRTG 2 cut(s) 800, 1208
SacI GAGCTC 1 cut(s) 917
SapI GCTCTTC 1 cut(s) 1063
SaqAI TTAA 8 cut(s) 6, 185, 254, 450, 669, 1140, 1578, 2067
SatI GCNGC 3 cut(s) 677, 1010, 1810
Sau96I GGNCC 6 cut(s) 106, 721, 833, 1248, 2031, 2071
SchI GAGTC 3 cut(s) 35, 743, 1789
ScrFI CCNGG 8 cut(s) 104, 105, 635, 725, 741, 864, 901, 2058
SduI GDGCHC 4 cut(s) 164, 273, 295, 917
SfcI CTRYAG 2 cut(s) 1014, 1784
SinI GGWCC 5 cut(s) 721, 833, 1248, 2031, 2071
SmaI CCCGGG 1 cut(s) 105
SmiMI CAYNNNNRTG 2 cut(s) 800, 1208
SmlI CTYRAG 2 cut(s) 1678, 2182
SmoI CTYRAG 2 cut(s) 1678, 2182
SsiI CCGC 4 cut(s) 495, 938, 1495, 1936
SspI AATATT 1 cut(s) 340
SspMI CTAG 9 cut(s) 110, 935, 1232, 1295, 1376, 1571, 1868, 1977, 2003
SstI GAGCTC 1 cut(s) 917
StyD4I CCNGG 8 cut(s) 102, 103, 633, 723, 739, 862, 899, 2056
StyI CCWWGG 4 cut(s) 36, 165, 176, 1116
TaaI ACNGT 4 cut(s) 252, 268, 406, 959
TaiI ACGT 2 cut(s) 69, 735
TaqI TCGA 4 cut(s) 303, 330, 619, 1323
TaqII GACCGA 1 cut(s) 1805
TatI WGTACW 3 cut(s) 259, 604, 949
TfiI GAWTC 4 cut(s) 1070, 1241, 1291, 2215
Tru1I TTAA 8 cut(s) 6, 185, 254, 450, 669, 1140, 1578, 2067
Tru9I TTAA 8 cut(s) 6, 185, 254, 450, 669, 1140, 1578, 2067
TscAI CASTG 4 cut(s) 255, 273, 513, 962
TseFI GTSAC 5 cut(s) 475, 802, 1297, 1442, 1648
TseI GCWGC 3 cut(s) 676, 1009, 1809
Tsp45I GTSAC 5 cut(s) 475, 802, 1297, 1442, 1648
TspDTI ATGAA 7 cut(s) 75, 146, 786, 1137, 1141, 1416, 1792
TspGWI ACGGA 2 cut(s) 1055, 1331
TspMI CCCGGG 1 cut(s) 103
TspRI CASTG 4 cut(s) 255, 273, 513, 962
Van91I CCANNNNNTGG 1 cut(s) 830
VneI GTGCAC 1 cut(s) 269
VpaK11BI GGWCC 5 cut(s) 721, 833, 1248, 2031, 2071
XapI RAATTY 4 cut(s) 29, 548, 683, 773
XceI RCATGY 2 cut(s) 425, 1549
XcmI CCANNNNNNNNNTGG 1 cut(s) 1282
XmaI CCCGGG 1 cut(s) 103
XspI CTAG 9 cut(s) 110, 935, 1232, 1295, 1376, 1571, 1868, 1977, 2003
Zsp2I ATGCAT 2 cut(s) 238, 1551
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.