Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 450 |
| AccII | CGCG | 1 cut(s) | 27 |
| AccIII | TCCGGA | 1 cut(s) | 165 |
| AciI | CCGC | 3 cut(s) | 44, 47, 197 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 172, 385, 503 |
| AgsI | TTSAA | 4 cut(s) | 126, 494, 502, 511 |
| AjiI | CACGTC | 1 cut(s) | 448 |
| AjnI | CCWGG | 1 cut(s) | 339 |
| AluBI | AGCT | 2 cut(s) | 461, 515 |
| AluI | AGCT | 2 cut(s) | 461, 515 |
| Alw26I | GTCTC | 1 cut(s) | 101 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 58 |
| Aor13HI | TCCGGA | 1 cut(s) | 165 |
| AoxI | GGCC | 1 cut(s) | 233 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 506 |
| AspLEI | GCGC | 1 cut(s) | 63 |
| AspS9I | GGNCC | 1 cut(s) | 163 |
| AsuHPI | GGTGA | 2 cut(s) | 151, 337 |
| AvaII | GGWCC | 1 cut(s) | 163 |
| BciT130I | CCWGG | 1 cut(s) | 341 |
| BciVI | GTATCC | 1 cut(s) | 347 |
| BcoDI | GTCTC | 1 cut(s) | 101 |
| BfaI | CTAG | 3 cut(s) | 11, 426, 468 |
| BfuI | GTATCC | 1 cut(s) | 347 |
| BisI | GCNGC | 1 cut(s) | 45 |
| BlsI | GCNGC | 1 cut(s) | 46 |
| Bme1390I | CCNGG | 1 cut(s) | 341 |
| Bme18I | GGWCC | 1 cut(s) | 163 |
| BmgBI | CACGTC | 1 cut(s) | 448 |
| BmgT120I | GGNCC | 1 cut(s) | 163 |
| BmiI | GGNNCC | 1 cut(s) | 164 |
| BmrFI | CCNGG | 1 cut(s) | 341 |
| BmsI | GCATC | 1 cut(s) | 31 |
| BsaI | GGTCTC | 1 cut(s) | 101 |
| BsaJI | CCNNGG | 1 cut(s) | 111 |
| BsaWI | WCCGGW | 1 cut(s) | 165 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 172, 385, 503 |
| Bse1I | ACTGG | 2 cut(s) | 236, 291 |
| Bse3DI | GCAATG | 1 cut(s) | 199 |
| BseAI | TCCGGA | 1 cut(s) | 165 |
| BseBI | CCWGG | 1 cut(s) | 341 |
| BseDI | CCNNGG | 1 cut(s) | 111 |
| BseGI | GGATG | 2 cut(s) | 69, 208 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 172, 385, 503 |
| BseMI | GCAATG | 1 cut(s) | 199 |
| BseMII | CTCAG | 2 cut(s) | 158, 279 |
| BseNI | ACTGG | 2 cut(s) | 236, 291 |
| Bsh1236I | CGCG | 1 cut(s) | 27 |
| BshFI | GGCC | 1 cut(s) | 235 |
| BsiSI | CCGG | 1 cut(s) | 166 |
| BslFI | GGGAC | 2 cut(s) | 242, 270 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 172, 385, 503 |
| BsmAI | GTCTC | 1 cut(s) | 101 |
| BsmFI | GGGAC | 2 cut(s) | 242, 270 |
| BsnI | GGCC | 1 cut(s) | 235 |
| Bso31I | GGTCTC | 1 cut(s) | 101 |
| Bsp13I | TCCGGA | 1 cut(s) | 165 |
| Bsp68I | TCGCGA | 1 cut(s) | 27 |
| BspACI | CCGC | 3 cut(s) | 44, 47, 197 |
| BspANI | GGCC | 1 cut(s) | 235 |
| BspCNI | CTCAG | 2 cut(s) | 157, 278 |
| BspEI | TCCGGA | 1 cut(s) | 165 |
| BspFNI | CGCG | 1 cut(s) | 27 |
| BspLI | GGNNCC | 1 cut(s) | 164 |
| BspTNI | GGTCTC | 1 cut(s) | 101 |
| BsrDI | GCAATG | 1 cut(s) | 199 |
| BsrI | ACTGG | 2 cut(s) | 236, 291 |
| BssECI | CCNNGG | 1 cut(s) | 111 |
| BssT1I | CCWWGG | 1 cut(s) | 111 |
| Bst2UI | CCWGG | 1 cut(s) | 341 |
| Bst4CI | ACNGT | 3 cut(s) | 139, 261, 335 |
| Bst6I | CTCTTC | 1 cut(s) | 495 |
| BstDEI | CTNAG | 3 cut(s) | 144, 265, 516 |
| BstF5I | GGATG | 2 cut(s) | 69, 208 |
| BstFNI | CGCG | 1 cut(s) | 27 |
| BstHHI | GCGC | 1 cut(s) | 63 |
| BstMAI | GTCTC | 1 cut(s) | 101 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 53, 82, 241 |
| BstNI | CCWGG | 1 cut(s) | 341 |
| BstSCI | CCNGG | 1 cut(s) | 339 |
| BstUI | CGCG | 1 cut(s) | 27 |
| BsuI | GTATCC | 1 cut(s) | 347 |
| BsuRI | GGCC | 1 cut(s) | 235 |
| BtrI | CACGTC | 1 cut(s) | 448 |
| BtsCI | GGATG | 2 cut(s) | 69, 208 |
| BtuMI | TCGCGA | 1 cut(s) | 27 |
| CaiI | CAGNNNCTG | 1 cut(s) | 58 |
| CfoI | GCGC | 1 cut(s) | 63 |
| Cfr13I | GGNCC | 1 cut(s) | 163 |
| CseI | GACGC | 1 cut(s) | 290 |
| CviAII | CATG | 4 cut(s) | 15, 241, 305, 353 |
| CviJI | RGCY | 8 cut(s) | 56, 85, 116, 235, 431, 461, 507, 515 |
| CviKI_1 | RGCY | 8 cut(s) | 56, 85, 116, 235, 431, 461, 507, 515 |
| DdeI | CTNAG | 3 cut(s) | 144, 265, 516 |
| Eam1104I | CTCTTC | 1 cut(s) | 495 |
| EarI | CTCTTC | 1 cut(s) | 495 |
| Eco130I | CCWWGG | 1 cut(s) | 111 |
| Eco31I | GGTCTC | 1 cut(s) | 101 |
| Eco47I | GGWCC | 1 cut(s) | 163 |
| EcoRII | CCWGG | 1 cut(s) | 339 |
| EcoT14I | CCWWGG | 1 cut(s) | 111 |
| ErhI | CCWWGG | 1 cut(s) | 111 |
| FaeI | CATG | 4 cut(s) | 18, 244, 308, 356 |
| FaiI | YATR | 4 cut(s) | 16, 242, 306, 354 |
| FaqI | GGGAC | 2 cut(s) | 242, 270 |
| FatI | CATG | 4 cut(s) | 14, 240, 304, 352 |
| FauI | CCCGC | 1 cut(s) | 190 |
| FblI | GTMKAC | 1 cut(s) | 450 |
| Fnu4HI | GCNGC | 1 cut(s) | 45 |
| FokI | GGATG | 2 cut(s) | 56, 215 |
| Fsp4HI | GCNGC | 1 cut(s) | 45 |
| FspBI | CTAG | 3 cut(s) | 11, 426, 468 |
| GlaI | GCGC | 1 cut(s) | 62 |
| GluI | GCNGC | 1 cut(s) | 45 |
| HaeIII | GGCC | 1 cut(s) | 235 |
| HapII | CCGG | 1 cut(s) | 166 |
| HgaI | GACGC | 1 cut(s) | 290 |
| HhaI | GCGC | 1 cut(s) | 63 |
| Hin1II | CATG | 4 cut(s) | 18, 244, 308, 356 |
| Hin6I | GCGC | 1 cut(s) | 61 |
| HinP1I | GCGC | 1 cut(s) | 61 |
| HindIII | AAGCTT | 2 cut(s) | 459, 513 |
| HinfI | GANTC | 4 cut(s) | 7, 142, 206, 422 |
| HpaII | CCGG | 1 cut(s) | 166 |
| HphI | GGTGA | 2 cut(s) | 151, 337 |
| Hpy166II | GTNNAC | 1 cut(s) | 451 |
| Hpy188I | TCNGA | 3 cut(s) | 135, 298, 411 |
| Hpy188III | TCNNGA | 4 cut(s) | 26, 166, 317, 394 |
| Hpy8I | GTNNAC | 1 cut(s) | 451 |
| Hpy99I | CGWCG | 1 cut(s) | 139 |
| HpyAV | CCTTC | 2 cut(s) | 297, 496 |
| HpyCH4III | ACNGT | 3 cut(s) | 139, 261, 335 |
| HpyCH4IV | ACGT | 1 cut(s) | 447 |
| HpyCH4V | TGCA | 2 cut(s) | 192, 244 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 53, 82, 241 |
| HpyF3I | CTNAG | 3 cut(s) | 144, 265, 516 |
| HpySE526I | ACGT | 1 cut(s) | 447 |
| Hsp92II | CATG | 4 cut(s) | 18, 244, 308, 356 |
| HspAI | GCGC | 1 cut(s) | 61 |
| Kpn2I | TCCGGA | 1 cut(s) | 165 |
| LweI | GCATC | 1 cut(s) | 31 |
| MaeI | CTAG | 3 cut(s) | 11, 426, 468 |
| MaeII | ACGT | 1 cut(s) | 447 |
| MaeIII | GTNAC | 3 cut(s) | 139, 153, 325 |
| MboII | GAAGA | 4 cut(s) | 88, 122, 456, 482 |
| MluCI | AATT | 2 cut(s) | 19, 126 |
| MlyI | GAGTC | 2 cut(s) | 136, 431 |
| MmeI | TCCRAC | 1 cut(s) | 158 |
| MnlI | CCTC | 5 cut(s) | 97, 110, 144, 153, 166 |
| MroI | TCCGGA | 1 cut(s) | 165 |
| MroXI | GAANNNNTTC | 1 cut(s) | 506 |
| MspI | CCGG | 1 cut(s) | 166 |
| MspR9I | CCNGG | 1 cut(s) | 341 |
| MvaI | CCWGG | 1 cut(s) | 341 |
| MvnI | CGCG | 1 cut(s) | 27 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 53, 82, 241 |
| NlaIII | CATG | 4 cut(s) | 18, 244, 308, 356 |
| NlaIV | GGNNCC | 1 cut(s) | 164 |
| NmuCI | GTSAC | 3 cut(s) | 139, 153, 325 |
| NruI | TCGCGA | 1 cut(s) | 27 |
| PdmI | GAANNNNTTC | 1 cut(s) | 506 |
| PfeI | GAWTC | 2 cut(s) | 7, 206 |
| PkrI | GCNGC | 1 cut(s) | 46 |
| PleI | GAGTC | 2 cut(s) | 136, 430 |
| PpsI | GAGTC | 2 cut(s) | 136, 430 |
| Psp6I | CCWGG | 1 cut(s) | 339 |
| PspGI | CCWGG | 1 cut(s) | 339 |
| PspN4I | GGNNCC | 1 cut(s) | 164 |
| PspPI | GGNCC | 1 cut(s) | 163 |
| PstNI | CAGNNNCTG | 1 cut(s) | 58 |
| RruI | TCGCGA | 1 cut(s) | 27 |
| SatI | GCNGC | 1 cut(s) | 45 |
| Sau96I | GGNCC | 1 cut(s) | 163 |
| SchI | GAGTC | 2 cut(s) | 136, 431 |
| ScrFI | CCNGG | 1 cut(s) | 341 |
| SetI | ASST | 7 cut(s) | 155, 345, 360, 381, 450, 463, 517 |
| SfaNI | GCATC | 1 cut(s) | 31 |
| SinI | GGWCC | 1 cut(s) | 163 |
| Sse9I | AATT | 2 cut(s) | 19, 126 |
| SsiI | CCGC | 3 cut(s) | 44, 47, 197 |
| SspMI | CTAG | 3 cut(s) | 11, 426, 468 |
| StyD4I | CCNGG | 1 cut(s) | 339 |
| StyI | CCWWGG | 1 cut(s) | 111 |
| TaaI | ACNGT | 3 cut(s) | 139, 261, 335 |
| TaiI | ACGT | 1 cut(s) | 450 |
| TasI | AATT | 2 cut(s) | 19, 126 |
| TauI | GCSGC | 1 cut(s) | 47 |
| TfiI | GAWTC | 2 cut(s) | 7, 206 |
| TseFI | GTSAC | 3 cut(s) | 139, 153, 325 |
| Tsp45I | GTSAC | 3 cut(s) | 139, 153, 325 |
| TspDTI | ATGAA | 2 cut(s) | 219, 229 |
| TspGWI | ACGGA | 1 cut(s) | 172 |
| VpaK11BI | GGWCC | 1 cut(s) | 163 |
| XmiI | GTMKAC | 1 cut(s) | 450 |
| XmnI | GAANNNNTTC | 1 cut(s) | 506 |
| XspI | CTAG | 3 cut(s) | 11, 426, 468 |