ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1258 |
| Acc16I | TGCGCA | 1 cut(s) | 454 |
| Acc36I | ACCTGC | 1 cut(s) | 206 |
| AccB1I | GGYRCC | 2 cut(s) | 47, 1977 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1800 |
| AccI | GTMKAC | 2 cut(s) | 253, 1026 |
| AccII | CGCG | 1 cut(s) | 1216 |
| AciI | CCGC | 7 cut(s) | 14, 24, 39, 773, 1216, 1603, 1936 |
| AclWI | GGATC | 4 cut(s) | 164, 874, 1623, 1712 |
| AcoI | YGGCCR | 1 cut(s) | 1436 |
| AcsI | RAATTY | 6 cut(s) | 88, 531, 876, 913, 1430, 1442 |
| AcuI | CTGAAG | 3 cut(s) | 789, 1447, 1930 |
| AfaI | GTAC | 3 cut(s) | 971, 1171, 1838 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 575, 1381, 1510, 1800 |
| AflII | CTTAAG | 1 cut(s) | 481 |
| AflIII | ACRYGT | 1 cut(s) | 1101 |
| AgsI | TTSAA | 8 cut(s) | 262, 530, 611, 966, 1016, 1074, 1099, 1870 |
| AhlI | ACTAGT | 2 cut(s) | 383, 572 |
| AjnI | CCWGG | 2 cut(s) | 148, 1729 |
| AluBI | AGCT | 6 cut(s) | 938, 989, 1056, 1223, 1520, 1562 |
| AluI | AGCT | 6 cut(s) | 938, 989, 1056, 1223, 1520, 1562 |
| Alw26I | GTCTC | 2 cut(s) | 1472, 2018 |
| AlwI | GGATC | 4 cut(s) | 164, 874, 1623, 1712 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1562 |
| AoxI | GGCC | 6 cut(s) | 439, 542, 1436, 1705, 1732, 1937 |
| ApeKI | GCWGC | 4 cut(s) | 822, 1220, 1385, 1811 |
| ApoI | RAATTY | 6 cut(s) | 88, 531, 876, 913, 1430, 1442 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1697 |
| AspLEI | GCGC | 3 cut(s) | 455, 1216, 1638 |
| AspS9I | GGNCC | 4 cut(s) | 104, 173, 439, 1733 |
| AsuC2I | CCSGG | 1 cut(s) | 1841 |
| AsuHPI | GGTGA | 5 cut(s) | 512, 653, 731, 994, 1405 |
| AvaII | GGWCC | 2 cut(s) | 104, 173 |
| BanI | GGYRCC | 2 cut(s) | 47, 1977 |
| BauI | CACGAG | 1 cut(s) | 630 |
| BbsI | GAAGAC | 2 cut(s) | 1359, 1450 |
| BbvI | GCAGC | 4 cut(s) | 809, 1232, 1372, 1798 |
| BccI | CCATC | 5 cut(s) | 119, 629, 1285, 1504, 1932 |
| BceAI | ACGGC | 2 cut(s) | 765, 939 |
| BciT130I | CCWGG | 2 cut(s) | 150, 1731 |
| BclI | TGATCA | 1 cut(s) | 808 |
| BcnI | CCSGG | 1 cut(s) | 1841 |
| BcoDI | GTCTC | 2 cut(s) | 1472, 2018 |
| BcuI | ACTAGT | 2 cut(s) | 383, 572 |
| BfaI | CTAG | 8 cut(s) | 212, 281, 384, 573, 789, 939, 990, 1107 |
| BfmI | CTRYAG | 1 cut(s) | 753 |
| BfoI | RGCGCY | 1 cut(s) | 1639 |
| BfrI | CTTAAG | 1 cut(s) | 481 |
| BfuAI | ACCTGC | 1 cut(s) | 206 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1633 |
| BisI | GCNGC | 6 cut(s) | 15, 823, 1221, 1386, 1812, 1937 |
| BlpI | GCTNAGC | 1 cut(s) | 144 |
| BlsI | GCNGC | 6 cut(s) | 16, 824, 1222, 1387, 1813, 1938 |
| Bme1390I | CCNGG | 3 cut(s) | 150, 1731, 1841 |
| Bme18I | GGWCC | 2 cut(s) | 104, 173 |
| BmgT120I | GGNCC | 4 cut(s) | 104, 173, 439, 1733 |
| BmiI | GGNNCC | 5 cut(s) | 49, 174, 1530, 1684, 1979 |
| BmrFI | CCNGG | 3 cut(s) | 150, 1731, 1841 |
| BmrI | ACTGGG | 1 cut(s) | 1413 |
| BmsI | GCATC | 6 cut(s) | 730, 984, 1149, 1557, 1584, 1889 |
| BmuI | ACTGGG | 1 cut(s) | 1413 |
| BpiI | GAAGAC | 2 cut(s) | 1359, 1450 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 144 |
| BpuEI | CTTGAG | 4 cut(s) | 391, 1730, 1847, 1989 |
| BpuMI | CCSGG | 1 cut(s) | 1841 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1139 |
| BsaI | GGTCTC | 1 cut(s) | 2018 |
| BsaJI | CCNNGG | 3 cut(s) | 591, 1702, 1729 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1326, 1356 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 575, 1381, 1510, 1800 |
| Bse1I | ACTGG | 5 cut(s) | 250, 479, 1130, 1198, 1408 |
| Bse3DI | GCAATG | 2 cut(s) | 519, 624 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1139 |
| BseBI | CCWGG | 2 cut(s) | 150, 1731 |
| BseDI | CCNNGG | 3 cut(s) | 591, 1702, 1729 |
| BseGI | GGATG | 5 cut(s) | 322, 999, 1277, 1575, 1880 |
| BseJI | GATNNNNATC | 1 cut(s) | 1139 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 575, 1381, 1510, 1800 |
| BseMI | GCAATG | 2 cut(s) | 519, 624 |
| BseMII | CTCAG | 5 cut(s) | 135, 375, 631, 846, 1669 |
| BseNI | ACTGG | 5 cut(s) | 250, 479, 1130, 1198, 1408 |
| BseX3I | CGGCCG | 1 cut(s) | 1436 |
| BseXI | GCAGC | 4 cut(s) | 809, 1232, 1372, 1798 |
| Bsh1236I | CGCG | 1 cut(s) | 1216 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1439 |
| BshFI | GGCC | 6 cut(s) | 441, 544, 1438, 1707, 1734, 1939 |
| BshNI | GGYRCC | 2 cut(s) | 47, 1977 |
| BsiEI | CGRYCG | 1 cut(s) | 1439 |
| BsiSI | CCGG | 3 cut(s) | 1439, 1613, 1840 |
| BslFI | GGGAC | 3 cut(s) | 872, 1420, 1817 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 575, 1381, 1510, 1800 |
| BsmAI | GTCTC | 2 cut(s) | 1472, 2018 |
| BsmFI | GGGAC | 3 cut(s) | 872, 1420, 1817 |
| BsmI | GAATGC | 2 cut(s) | 1232, 1789 |
| BsnI | GGCC | 6 cut(s) | 441, 544, 1438, 1707, 1734, 1939 |
| Bso31I | GGTCTC | 1 cut(s) | 2018 |
| Bsp143I | GATC | 9 cut(s) | 156, 457, 808, 866, 930, 1018, 1088, 1615, 1717 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 144 |
| BspACI | CCGC | 7 cut(s) | 14, 24, 39, 773, 1216, 1603, 1936 |
| BspANI | GGCC | 6 cut(s) | 441, 544, 1438, 1707, 1734, 1939 |
| BspCNI | CTCAG | 5 cut(s) | 136, 374, 630, 845, 1668 |
| BspFNI | CGCG | 1 cut(s) | 1216 |
| BspHI | TCATGA | 4 cut(s) | 240, 909, 1248, 1506 |
| BspLI | GGNNCC | 5 cut(s) | 49, 174, 1530, 1684, 1979 |
| BspMI | ACCTGC | 1 cut(s) | 206 |
| BspPI | GGATC | 4 cut(s) | 164, 874, 1623, 1712 |
| BspT107I | GGYRCC | 2 cut(s) | 47, 1977 |
| BspTI | CTTAAG | 1 cut(s) | 481 |
| BspTNI | GGTCTC | 1 cut(s) | 2018 |
| BsrDI | GCAATG | 2 cut(s) | 519, 624 |
| BsrI | ACTGG | 5 cut(s) | 250, 479, 1130, 1198, 1408 |
| BssECI | CCNNGG | 3 cut(s) | 591, 1702, 1729 |
| BssMI | GATC | 9 cut(s) | 156, 457, 808, 866, 930, 1018, 1088, 1615, 1717 |
| BssNAI | GTATAC | 1 cut(s) | 254 |
| BssSI | CACGAG | 1 cut(s) | 630 |
| BssT1I | CCWWGG | 1 cut(s) | 1702 |
| Bst1107I | GTATAC | 1 cut(s) | 254 |
| Bst2BI | CACGAG | 1 cut(s) | 630 |
| Bst2UI | CCWGG | 2 cut(s) | 150, 1731 |
| Bst4CI | ACNGT | 3 cut(s) | 340, 646, 727 |
| Bst6I | CTCTTC | 4 cut(s) | 37, 393, 707, 1992 |
| BstAFI | CTTAAG | 1 cut(s) | 481 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1211 |
| BstC8I | GCNNGC | 2 cut(s) | 1054, 1218 |
| BstDEI | CTNAG | 6 cut(s) | 131, 144, 361, 617, 832, 1655 |
| BstF5I | GGATG | 5 cut(s) | 322, 999, 1277, 1575, 1880 |
| BstFNI | CGCG | 1 cut(s) | 1216 |
| BstH2I | RGCGCY | 1 cut(s) | 1639 |
| BstHHI | GCGC | 3 cut(s) | 455, 1216, 1638 |
| BstKTI | GATC | 9 cut(s) | 159, 460, 811, 869, 933, 1021, 1091, 1618, 1720 |
| BstMAI | GTCTC | 2 cut(s) | 1472, 2018 |
| BstMBI | GATC | 9 cut(s) | 156, 457, 808, 866, 930, 1018, 1088, 1615, 1717 |
| BstMCI | CGRYCG | 1 cut(s) | 1439 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 290, 459, 749, 1211, 1220, 1229, 1633, 1820 |
| BstNI | CCWGG | 2 cut(s) | 150, 1731 |
| BstNSI | RCATGY | 1 cut(s) | 1105 |
| BstSCI | CCNGG | 3 cut(s) | 148, 1729, 1839 |
| BstSFI | CTRYAG | 1 cut(s) | 753 |
| BstUI | CGCG | 1 cut(s) | 1216 |
| BstV1I | GCAGC | 4 cut(s) | 809, 1232, 1372, 1798 |
| BstV2I | GAAGAC | 2 cut(s) | 1359, 1450 |
| BstX2I | RGATCY | 2 cut(s) | 866, 1615 |
| BstYI | RGATCY | 2 cut(s) | 866, 1615 |
| BstZ17I | GTATAC | 1 cut(s) | 254 |
| BstZI | CGGCCG | 1 cut(s) | 1436 |
| BsuRI | GGCC | 6 cut(s) | 441, 544, 1438, 1707, 1734, 1939 |
| BtsCI | GGATG | 5 cut(s) | 322, 999, 1277, 1575, 1880 |
| BtsIMutI | CAGTG | 3 cut(s) | 332, 857, 1191 |
| BveI | ACCTGC | 1 cut(s) | 206 |
| Cac8I | GCNNGC | 2 cut(s) | 1054, 1218 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1562 |
| CciI | TCATGA | 4 cut(s) | 240, 909, 1248, 1506 |
| CfoI | GCGC | 3 cut(s) | 455, 1216, 1638 |
| Cfr13I | GGNCC | 4 cut(s) | 104, 173, 439, 1733 |
| Csp6I | GTAC | 3 cut(s) | 970, 1170, 1837 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 216, 251 |
| CviQI | GTAC | 3 cut(s) | 970, 1170, 1837 |
| DdeI | CTNAG | 6 cut(s) | 131, 144, 361, 617, 832, 1655 |
| DpnI | GATC | 9 cut(s) | 158, 459, 810, 868, 932, 1020, 1090, 1617, 1719 |
| DpnII | GATC | 9 cut(s) | 156, 457, 808, 866, 930, 1018, 1088, 1615, 1717 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1258 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1258 |
| EaeI | YGGCCR | 1 cut(s) | 1436 |
| EagI | CGGCCG | 1 cut(s) | 1436 |
| Eam1104I | CTCTTC | 4 cut(s) | 37, 393, 707, 1992 |
| EarI | CTCTTC | 4 cut(s) | 37, 393, 707, 1992 |
| EciI | GGCGGA | 1 cut(s) | 54 |
| EclXI | CGGCCG | 1 cut(s) | 1436 |
| Eco130I | CCWWGG | 1 cut(s) | 1702 |
| Eco147I | AGGCCT | 1 cut(s) | 544 |
| Eco31I | GGTCTC | 1 cut(s) | 2018 |
| Eco47I | GGWCC | 2 cut(s) | 104, 173 |
| Eco52I | CGGCCG | 1 cut(s) | 1436 |
| Eco57I | CTGAAG | 3 cut(s) | 789, 1447, 1930 |
| EcoO109I | RGGNCCY | 1 cut(s) | 173 |
| EcoRI | GAATTC | 1 cut(s) | 876 |
| EcoRII | CCWGG | 2 cut(s) | 148, 1729 |
| EcoT14I | CCWWGG | 1 cut(s) | 1702 |
| EcoT22I | ATGCAT | 1 cut(s) | 1142 |
| ErhI | CCWWGG | 1 cut(s) | 1702 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 927, 959, 1078, 1110, 1682, 1714 |
| FaqI | GGGAC | 3 cut(s) | 872, 1420, 1817 |
| FauI | CCCGC | 2 cut(s) | 766, 1209 |
| FauNDI | CATATG | 1 cut(s) | 1767 |
| FbaI | TGATCA | 1 cut(s) | 808 |
| FblI | GTMKAC | 2 cut(s) | 253, 1026 |
| Fnu4HI | GCNGC | 6 cut(s) | 15, 823, 1221, 1386, 1812, 1937 |
| FokI | GGATG | 5 cut(s) | 329, 1006, 1264, 1562, 1867 |
| Fsp4HI | GCNGC | 6 cut(s) | 15, 823, 1221, 1386, 1812, 1937 |
| FspBI | CTAG | 8 cut(s) | 212, 281, 384, 573, 789, 939, 990, 1107 |
| FspI | TGCGCA | 1 cut(s) | 454 |
| GlaI | GCGC | 3 cut(s) | 454, 1215, 1637 |
| GluI | GCNGC | 6 cut(s) | 15, 823, 1221, 1386, 1812, 1937 |
| HaeII | RGCGCY | 1 cut(s) | 1639 |
| HaeIII | GGCC | 6 cut(s) | 441, 544, 1438, 1707, 1734, 1939 |
| HapII | CCGG | 3 cut(s) | 1439, 1613, 1840 |
| HhaI | GCGC | 3 cut(s) | 455, 1216, 1638 |
| Hin6I | GCGC | 3 cut(s) | 453, 1214, 1636 |
| HinP1I | GCGC | 3 cut(s) | 453, 1214, 1636 |
| HinfI | GANTC | 1 cut(s) | 1566 |
| HpaII | CCGG | 3 cut(s) | 1439, 1613, 1840 |
| HphI | GGTGA | 5 cut(s) | 512, 653, 731, 994, 1405 |
| Hpy166II | GTNNAC | 3 cut(s) | 254, 661, 1027 |
| Hpy188I | TCNGA | 8 cut(s) | 537, 620, 737, 808, 835, 1085, 1896, 1949 |
| Hpy8I | GTNNAC | 3 cut(s) | 254, 661, 1027 |
| HpyAV | CCTTC | 7 cut(s) | 186, 413, 1291, 1950, 1954, 1977, 2003 |
| HpyCH4III | ACNGT | 3 cut(s) | 340, 646, 727 |
| HpyCH4IV | ACGT | 2 cut(s) | 1185, 1835 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 290, 459, 749, 1211, 1220, 1229, 1633, 1820 |
| HpyF3I | CTNAG | 6 cut(s) | 131, 144, 361, 617, 832, 1655 |
| HpySE526I | ACGT | 2 cut(s) | 1185, 1835 |
| HspAI | GCGC | 3 cut(s) | 453, 1214, 1636 |
| Ksp22I | TGATCA | 1 cut(s) | 808 |
| Kzo9I | GATC | 9 cut(s) | 156, 457, 808, 866, 930, 1018, 1088, 1615, 1717 |
| LmnI | GCTCC | 4 cut(s) | 1086, 1559, 1682, 1786 |
| Lsp1109I | GCAGC | 4 cut(s) | 809, 1232, 1372, 1798 |
| LweI | GCATC | 6 cut(s) | 730, 984, 1149, 1557, 1584, 1889 |
| MaeI | CTAG | 8 cut(s) | 212, 281, 384, 573, 789, 939, 990, 1107 |
| MaeII | ACGT | 2 cut(s) | 1185, 1835 |
| MaeIII | GTNAC | 4 cut(s) | 304, 847, 1759, 1831 |
| MalI | GATC | 9 cut(s) | 158, 459, 810, 868, 932, 1020, 1090, 1617, 1719 |
| MboI | GATC | 9 cut(s) | 156, 457, 808, 866, 930, 1018, 1088, 1615, 1717 |
| MflI | RGATCY | 2 cut(s) | 866, 1615 |
| MmeI | TCCRAC | 3 cut(s) | 404, 1380, 1995 |
| Mph1103I | ATGCAT | 1 cut(s) | 1142 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1697 |
| MseI | TTAA | 4 cut(s) | 71, 482, 1130, 1856 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1490, 1511, 1580, 1766 |
| MspCI | CTTAAG | 1 cut(s) | 481 |
| MspI | CCGG | 3 cut(s) | 1439, 1613, 1840 |
| MspR9I | CCNGG | 3 cut(s) | 150, 1731, 1841 |
| Mva1269I | GAATGC | 2 cut(s) | 1232, 1789 |
| MvaI | CCWGG | 2 cut(s) | 150, 1731 |
| MvnI | CGCG | 1 cut(s) | 1216 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 290, 459, 749, 1211, 1220, 1229, 1633, 1820 |
| NciI | CCSGG | 1 cut(s) | 1841 |
| NdeI | CATATG | 1 cut(s) | 1767 |
| NdeII | GATC | 9 cut(s) | 156, 457, 808, 866, 930, 1018, 1088, 1615, 1717 |
| NlaIV | GGNNCC | 5 cut(s) | 49, 174, 1530, 1684, 1979 |
| NmeAIII | GCCGAG | 1 cut(s) | 572 |
| NmuCI | GTSAC | 3 cut(s) | 304, 1759, 1831 |
| NsbI | TGCGCA | 1 cut(s) | 454 |
| NsiI | ATGCAT | 1 cut(s) | 1142 |
| NspI | RCATGY | 1 cut(s) | 1105 |
| PagI | TCATGA | 4 cut(s) | 240, 909, 1248, 1506 |
| PceI | AGGCCT | 1 cut(s) | 544 |
| PciI | ACATGT | 1 cut(s) | 1101 |
| PctI | GAATGC | 2 cut(s) | 1232, 1789 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1697 |
| PfeI | GAWTC | 1 cut(s) | 1566 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1800 |
| PkrI | GCNGC | 6 cut(s) | 16, 824, 1222, 1387, 1813, 1938 |
| PpuMI | RGGWCCY | 1 cut(s) | 173 |
| PscI | ACATGT | 1 cut(s) | 1101 |
| Psp5II | RGGWCCY | 1 cut(s) | 173 |
| Psp6I | CCWGG | 2 cut(s) | 148, 1729 |
| PspGI | CCWGG | 2 cut(s) | 148, 1729 |
| PspN4I | GGNNCC | 5 cut(s) | 49, 174, 1530, 1684, 1979 |
| PspPI | GGNCC | 4 cut(s) | 104, 173, 439, 1733 |
| PspPPI | RGGWCCY | 1 cut(s) | 173 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1562 |
| PsuI | RGATCY | 2 cut(s) | 866, 1615 |
| RsaI | GTAC | 3 cut(s) | 971, 1171, 1838 |
| RsaNI | GTAC | 3 cut(s) | 970, 1170, 1837 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1490, 1511, 1580, 1766 |
| SaqAI | TTAA | 4 cut(s) | 71, 482, 1130, 1856 |
| SatI | GCNGC | 6 cut(s) | 15, 823, 1221, 1386, 1812, 1937 |
| Sau3AI | GATC | 9 cut(s) | 156, 457, 808, 866, 930, 1018, 1088, 1615, 1717 |
| Sau96I | GGNCC | 4 cut(s) | 104, 173, 439, 1733 |
| ScrFI | CCNGG | 3 cut(s) | 150, 1731, 1841 |
| SfaNI | GCATC | 6 cut(s) | 730, 984, 1149, 1557, 1584, 1889 |
| SfcI | CTRYAG | 1 cut(s) | 753 |
| SinI | GGWCC | 2 cut(s) | 104, 173 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1490, 1511, 1580, 1766 |
| SmlI | CTYRAG | 5 cut(s) | 370, 481, 1709, 1862, 2004 |
| SmoI | CTYRAG | 5 cut(s) | 370, 481, 1709, 1862, 2004 |
| SpeI | ACTAGT | 2 cut(s) | 383, 572 |
| SseBI | AGGCCT | 1 cut(s) | 544 |
| SsiI | CCGC | 7 cut(s) | 14, 24, 39, 773, 1216, 1603, 1936 |
| SspMI | CTAG | 8 cut(s) | 212, 281, 384, 573, 789, 939, 990, 1107 |
| StuI | AGGCCT | 1 cut(s) | 544 |
| StyD4I | CCNGG | 3 cut(s) | 148, 1729, 1839 |
| StyI | CCWWGG | 1 cut(s) | 1702 |
| TaaI | ACNGT | 3 cut(s) | 340, 646, 727 |
| TaiI | ACGT | 2 cut(s) | 1188, 1838 |
| TaqI | TCGA | 3 cut(s) | 123, 1309, 1716 |
| TauI | GCSGC | 2 cut(s) | 17, 1939 |
| TfiI | GAWTC | 1 cut(s) | 1566 |
| Tru1I | TTAA | 4 cut(s) | 71, 482, 1130, 1856 |
| Tru9I | TTAA | 4 cut(s) | 71, 482, 1130, 1856 |
| TscAI | CASTG | 3 cut(s) | 339, 864, 1198 |
| TseFI | GTSAC | 3 cut(s) | 304, 1759, 1831 |
| TseI | GCWGC | 4 cut(s) | 822, 1220, 1385, 1811 |
| Tsp45I | GTSAC | 3 cut(s) | 304, 1759, 1831 |
| TspRI | CASTG | 3 cut(s) | 339, 864, 1198 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1800 |
| Vha464I | CTTAAG | 1 cut(s) | 481 |
| VpaK11BI | GGWCC | 2 cut(s) | 104, 173 |
| XapI | RAATTY | 6 cut(s) | 88, 531, 876, 913, 1430, 1442 |
| XbaI | TCTAGA | 1 cut(s) | 1106 |
| XceI | RCATGY | 1 cut(s) | 1105 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1190, 1540 |
| XmiI | GTMKAC | 2 cut(s) | 253, 1026 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1697 |
| XspI | CTAG | 8 cut(s) | 212, 281, 384, 573, 789, 939, 990, 1107 |
| Zsp2I | ATGCAT | 1 cut(s) | 1142 |