Rmu_sc0019815.1_g000003

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019815.1
OG0000045
Physical Location & Seq
Reverse (-)
5199 .. 5729
531 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0019815.1_g000003.1.cds

Sequence Viewer

Length: 531 bp
atgggcaatgcaacgacgatgagagctttgagggatttggtggctcaaaataggcctcagatcgtatttctgatggaaacaaaaatcagcgacttaaaggagtttcaaggtctacaacgcgaactaggttttgctcatgcaaaggaggttctcagcgttggacagtctgatggtttgggacttttctggacggaggatgttgatgtgtgtgtgcgcacgtcatcggctcatcatattgatatggaaattaggtcgggttcgggagatcctcgctggagattgactggattctacggatttgcacatacctgtgagcatgacaagtcatggcaattgatacgtgatctttgtgatatggactcgctgccttgggttaacattggcgatttcaatgaaatactaaataacagcgagaaaacgaatggtcctctacgatctgaaagacagatgagaggctttagggatgcactggggtatagcgatctgatcgatttgggttttcaaggagcgaagataacctggtggaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

176

Amino Acids

20.07

Weight (kDa)

5.33

Isoelectric Point (pI)

32.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000045)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20031 FvH4_1g20032 FvH4_1g28811 FvH4_2g01463 FvH4_2g09182 FvH4_2g28261 FvH4_3g29411 FvH4_3g37471 FvH4_4g14101 FvH4_4g16371 FvH4_4g18821 FvH4_5g18832 FvH4_5g30171 FvH4_6g12302 FvH4_6g16683 FvH4_6g16753 FvH4_6g17021 FvH4_6g18902 FvH4_6g19251 FvH4_6g23332 FvH4_6g28111 FvH4_6g33201 FvH4_6g40361 FvH4_7g09171
prunus_persica Prupe.1G074300_v2.0.a1 Prupe.3G105600_v2.0.a1
pyrus_communis pycom05g10560 pycom07g05620 pycom12424g00110
rosa_chinensis RchiOBHm_Chr1g0334141 RchiOBHm_Chr5g0016671 RchiOBHm_Chr7g0208511 RchiOBHm_Chr7g0231041
rosa_laevigata RLG00000015243
rosa_multiflora Rmu_co7986832.1_g000001 Rmu_co8043772.1_g000001 Rmu_co8043774.1_g000001 Rmu_co8055874.1_g000001 Rmu_co8106278.1_g000001 Rmu_co8122148.1_g000001 Rmu_co8133260.1_g000001 Rmu_co8134318.1_g000001 Rmu_co8183860.1_g000001 Rmu_co8184294.1_g000001 Rmu_co8189556.1_g000001 Rmu_co8236577.1_g000001 Rmu_co8239421.1_g000001 Rmu_co8250871.1_g000001 Rmu_co8300345.1_g000001 Rmu_co8310915.1_g000001 Rmu_co8333321.1_g000001 Rmu_co8334427.1_g000001 Rmu_co8360619.1_g000001 Rmu_co8360619.1_g000002 Rmu_co8366931.1_g000001 Rmu_co8375289.1_g000001 Rmu_co8406881.1_g000001 Rmu_co8444187.1_g000001 Rmu_co8464563.1_g000001 Rmu_co8505097.1_g000001 Rmu_sc0000031.1_g000042 Rmu_sc0000031.1_g000043 Rmu_sc0000053.1_g000008 Rmu_sc0000104.1_g000026 Rmu_sc0000115.1_g000003 Rmu_sc0000148.1_g000077 Rmu_sc0000257.1_g000001 Rmu_sc0000311.1_g000016 Rmu_sc0000347.1_g000035 Rmu_sc0000365.1_g000048 Rmu_sc0000389.1_g000027 Rmu_sc0000399.1_g000009 Rmu_sc0000399.1_g000015 Rmu_sc0000408.1_g000016 Rmu_sc0000452.1_g000007 Rmu_sc0000458.1_g000015 Rmu_sc0000470.1_g000010 Rmu_sc0000498.1_g000067 Rmu_sc0000499.1_g000016 Rmu_sc0000536.1_g000029 Rmu_sc0000539.1_g000015 Rmu_sc0000544.1_g000005 Rmu_sc0000571.1_g000013 Rmu_sc0000573.1_g000013 Rmu_sc0000573.1_g000014 Rmu_sc0000600.1_g000043 Rmu_sc0000631.1_g000014 Rmu_sc0000657.1_g000014 Rmu_sc0000711.1_g000005 Rmu_sc0000711.1_g000059 Rmu_sc0000717.1_g000024 Rmu_sc0000717.1_g000025 Rmu_sc0000737.1_g000001 Rmu_sc0000744.1_g000081 Rmu_sc0000757.1_g000011 Rmu_sc0000784.1_g000026 Rmu_sc0000800.1_g000010 Rmu_sc0000816.1_g000017 Rmu_sc0000816.1_g000022 Rmu_sc0000870.1_g000047 Rmu_sc0000898.1_g000107 Rmu_sc0000929.1_g000011 Rmu_sc0001009.1_g000034 Rmu_sc0001059.1_g000021 Rmu_sc0001062.1_g000003 Rmu_sc0001124.1_g000027 Rmu_sc0001169.1_g000015 Rmu_sc0001169.1_g000016 Rmu_sc0001176.1_g000011 Rmu_sc0001176.1_g000012 Rmu_sc0001200.1_g000058 Rmu_sc0001200.1_g000059 Rmu_sc0001211.1_g000132 Rmu_sc0001250.1_g000019 Rmu_sc0001288.1_g000007 Rmu_sc0001416.1_g000012 Rmu_sc0001455.1_g000033 Rmu_sc0001461.1_g000077 Rmu_sc0001514.1_g000008 Rmu_sc0001531.1_g000015 Rmu_sc0001531.1_g000016 Rmu_sc0001548.1_g000037 Rmu_sc0001576.1_g000031 Rmu_sc0001615.1_g000011 Rmu_sc0001648.1_g000052 Rmu_sc0001648.1_g000053 Rmu_sc0001694.1_g000025 Rmu_sc0001696.1_g000022 Rmu_sc0001716.1_g000025 Rmu_sc0001799.1_g000003 Rmu_sc0001801.1_g000010 Rmu_sc0001801.1_g000011 Rmu_sc0001814.1_g000007 Rmu_sc0001863.1_g000030 Rmu_sc0001891.1_g000056 Rmu_sc0001891.1_g000057 Rmu_sc0001891.1_g000058 Rmu_sc0001940.1_g000032 Rmu_sc0001966.1_g000020 Rmu_sc0001982.1_g000009 Rmu_sc0001998.1_g000020 Rmu_sc0001998.1_g000021 Rmu_sc0002000.1_g000008 Rmu_sc0002023.1_g000013 Rmu_sc0002038.1_g000015 Rmu_sc0002038.1_g000016 Rmu_sc0002043.1_g000008 Rmu_sc0002063.1_g000010 Rmu_sc0002094.1_g000035 Rmu_sc0002099.1_g000007 Rmu_sc0002300.1_g000012 Rmu_sc0002316.1_g000063 Rmu_sc0002485.1_g000006 Rmu_sc0002520.1_g000010 Rmu_sc0002539.1_g000041 Rmu_sc0002665.1_g000012 Rmu_sc0002858.1_g000005 Rmu_sc0002882.1_g000038 Rmu_sc0002882.1_g000039 Rmu_sc0002890.1_g000016 Rmu_sc0002931.1_g000024 Rmu_sc0002942.1_g000022 Rmu_sc0003002.1_g000051 Rmu_sc0003012.1_g000030 Rmu_sc0003147.1_g000014 Rmu_sc0003156.1_g000006 Rmu_sc0003162.1_g000006 Rmu_sc0003261.1_g000027 Rmu_sc0003399.1_g000008 Rmu_sc0003500.1_g000004 Rmu_sc0003514.1_g000006 Rmu_sc0003764.1_g000013 Rmu_sc0003764.1_g000014 Rmu_sc0003764.1_g000015 Rmu_sc0003776.1_g000039 Rmu_sc0003829.1_g000001 Rmu_sc0003834.1_g000016 Rmu_sc0003834.1_g000017 Rmu_sc0003834.1_g000019 Rmu_sc0003834.1_g000020 Rmu_sc0003929.1_g000011 Rmu_sc0004003.1_g000002 Rmu_sc0004005.1_g000002 Rmu_sc0004240.1_g000001 Rmu_sc0004240.1_g000002 Rmu_sc0004340.1_g000023 Rmu_sc0004373.1_g000008 Rmu_sc0004373.1_g000009 Rmu_sc0004413.1_g000030 Rmu_sc0004467.1_g000011 Rmu_sc0004473.1_g000010 Rmu_sc0004577.1_g000023 Rmu_sc0004596.1_g000040 Rmu_sc0004711.1_g000024 Rmu_sc0004714.1_g000005 Rmu_sc0004720.1_g000012 Rmu_sc0004730.1_g000002 Rmu_sc0004733.1_g000004 Rmu_sc0004763.1_g000001 Rmu_sc0004768.1_g000010 Rmu_sc0004889.1_g000007 Rmu_sc0004889.1_g000008 Rmu_sc0004904.1_g000005 Rmu_sc0004961.1_g000003 Rmu_sc0004961.1_g000009 Rmu_sc0004990.1_g000007 Rmu_sc0005104.1_g000004 Rmu_sc0005122.1_g000016 Rmu_sc0005122.1_g000017 Rmu_sc0005229.1_g000013 Rmu_sc0005308.1_g000009 Rmu_sc0005363.1_g000010 Rmu_sc0005363.1_g000011 Rmu_sc0005382.1_g000001 Rmu_sc0005389.1_g000023 Rmu_sc0005514.1_g000008 Rmu_sc0005593.1_g000014 Rmu_sc0005705.1_g000010 Rmu_sc0005722.1_g000010 Rmu_sc0005745.1_g000027 Rmu_sc0005745.1_g000028 Rmu_sc0005802.1_g000023 Rmu_sc0005899.1_g000002 Rmu_sc0005952.1_g000001 Rmu_sc0005978.1_g000007 Rmu_sc0006158.1_g000001 Rmu_sc0006233.1_g000035 Rmu_sc0006343.1_g000009 Rmu_sc0006367.1_g000005 Rmu_sc0006444.1_g000007 Rmu_sc0006445.1_g000017 Rmu_sc0006493.1_g000015 Rmu_sc0006552.1_g000002 Rmu_sc0006695.1_g000054 Rmu_sc0006720.1_g000006 Rmu_sc0006722.1_g000015 Rmu_sc0007029.1_g000016 Rmu_sc0007080.1_g000001 Rmu_sc0007328.1_g000007 Rmu_sc0007341.1_g000003 Rmu_sc0007366.1_g000006 Rmu_sc0007421.1_g000003 Rmu_sc0007652.1_g000013 Rmu_sc0007716.1_g000002 Rmu_sc0007790.1_g000016 Rmu_sc0007802.1_g000002 Rmu_sc0008049.1_g000037 Rmu_sc0008087.1_g000009 Rmu_sc0008509.1_g000006 Rmu_sc0008676.1_g000002 Rmu_sc0008800.1_g000012 Rmu_sc0009053.1_g000003 Rmu_sc0009053.1_g000004 Rmu_sc0009241.1_g000002 Rmu_sc0009538.1_g000016 Rmu_sc0009568.1_g000001 Rmu_sc0009579.1_g000014 Rmu_sc0009742.1_g000001 Rmu_sc0009895.1_g000025 Rmu_sc0010202.1_g000006 Rmu_sc0010334.1_g000001 Rmu_sc0010483.1_g000022 Rmu_sc0010901.1_g000001 Rmu_sc0010937.1_g000008 Rmu_sc0011079.1_g000001 Rmu_sc0011173.1_g000012 Rmu_sc0011609.1_g000001 Rmu_sc0011698.1_g000013 Rmu_sc0011778.1_g000018 Rmu_sc0012115.1_g000006 Rmu_sc0012403.1_g000018 Rmu_sc0012426.1_g000003 Rmu_sc0012426.1_g000004 Rmu_sc0012705.1_g000001 Rmu_sc0012897.1_g000003 Rmu_sc0013014.1_g000009 Rmu_sc0013188.1_g000003 Rmu_sc0013612.1_g000007 Rmu_sc0013612.1_g000008 Rmu_sc0014076.1_g000002 Rmu_sc0014162.1_g000018 Rmu_sc0014206.1_g000008 Rmu_sc0014426.1_g000003 Rmu_sc0015447.1_g000006 Rmu_sc0016197.1_g000003 Rmu_sc0016546.1_g000001 Rmu_sc0016546.1_g000002 Rmu_sc0017848.1_g000001 Rmu_sc0017848.1_g000002 Rmu_sc0018300.1_g000001 Rmu_sc0018325.1_g000008 Rmu_sc0019396.1_g000002 Rmu_sc0019815.1_g000003 Rmu_sc0022463.1_g000004 Rmu_sc0023070.1_g000009 Rmu_sc0023965.1_g000004 Rmu_sc0024072.1_g000004 Rmu_sc0024195.1_g000017 Rmu_sc0024446.1_g000004 Rmu_sc0026134.1_g000001 Rmu_sc0026279.1_g000001 Rmu_sc0026736.1_g000001 Rmu_sc0027357.1_g000001 Rmu_sc0027357.1_g000002 Rmu_sc0027596.1_g000001 Rmu_sc0027596.1_g000002 Rmu_sc0027778.1_g000005 Rmu_sc0027873.1_g000001 Rmu_sc0028295.1_g000001 Rmu_sc0028706.1_g000002 Rmu_sc0034015.1_g000001 Rmu_sc0034598.1_g000002 Rmu_sc0035534.1_g000001 Rmu_sc0036127.1_g000001 Rmu_sc0036172.1_g000001 Rmu_sc0036279.1_g000002 Rmu_sc0036593.1_g000001 Rmu_sc0036891.1_g000001 Rmu_sc0041752.1_g000001 Rmu_sc0041761.1_g000001 Rmu_sc0042299.1_g000001 Rmu_sc0042653.1_g000003 Rmu_ssc0000011.1_g000004 Rmu_ssc0000035.1_g000004 Rmu_ssc0000064.1_g000029 Rmu_ssc0000201.1_g000005 Rmu_ssc0000201.1_g000010 Rmu_ssc0000201.1_g000011 Rmu_ssc0000342.1_g000008 Rmu_ssc0000342.1_g000019 Rmu_ssc0000381.1_g000002 Rmu_ssc0000432.1_g000083
rosa_roxburghii Rroxscaffold_1G00000890 Rroxscaffold_1G00045620 Rroxscaffold_1G00061860 Rroxscaffold_4G00303310 Rroxscaffold_4G00331420 Rroxscaffold_6G00406060
rosa_rugosa Rorug01G0072600 Rorug01G0113600 Rorug01G0113700 Rorug01G0167100 Rorug01G0199300 Rorug01G0274300 Rorug01G0312600 Rorug01G0383700 Rorug02G0026100.1 Rorug02G0173700 Rorug02G0211900 Rorug02G0212100 Rorug02G0341000 Rorug02G0634200 Rorug03G0098500 Rorug03G0106400 Rorug03G0144900 Rorug03G0145000 Rorug03G0155700 Rorug03G0155800 Rorug03G0170300 Rorug03G0184200 Rorug03G0213700 Rorug03G0229300 Rorug03G0232700.1 Rorug03G0232800 Rorug03G0324800 Rorug03G0334900 Rorug04G0049700 Rorug04G0067800 Rorug04G0197400 Rorug04G0235600 Rorug05G0038600 Rorug05G0081400 Rorug05G0089200 Rorug05G0157400 Rorug05G0157900 Rorug05G0157900 Rorug05G0186600 Rorug05G0214300 Rorug05G0267700 Rorug05G0309100 Rorug05G0370800 Rorug05G0419000 Rorug05G0515800 Rorug06G0040600 Rorug06G0069100 Rorug06G0142200 Rorug06G0142800 Rorug06G0144400 Rorug06G0276500 Rorug06G0444200 Rorug06G0495800 Rorug07G0017900 Rorug07G0030300 Rorug07G0031900 Rorug07G0032000 Rorug07G0051000 Rorug07G0053700 Rorug07G0116200 Rorug07G0164400 Rorug07G0236200 Rorug07G0308600 Rorug07G0313900
rosa_samantha Rh1CG051600 Rh1CG098200 Rh1CG101900 Rh1DG109900 Rh2BG354600 Rh2CG366900 Rh2DG048400 Rh2DG464500 Rh2DG484000 Rh3AG277100 Rh3AG286800 Rh3BG229500 Rh3DG264200 Rh4BG155600 Rh5AG127200 Rh5AG520800 Rh5BG116100 Rh6DG091200 Rh6DG091300 Rh7AG106700 Rh7AG343500 Rh7BG179600 Rh7BG337400 Rh7CG299700
rosa_wichuraiana Rw1G026260 Rw5G047800 Rw6G003270 Rw6G025380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 215
AccI GTMKAC 1 cut(s) 112
AccII CGCG 1 cut(s) 120
AclWI GGATC 1 cut(s) 260
AgsI TTSAA 3 cut(s) 107, 391, 503
AjiI CACGTC 1 cut(s) 219
AjnI CCWGG 1 cut(s) 518
AluBI AGCT 1 cut(s) 26
AluI AGCT 1 cut(s) 26
AlwI GGATC 1 cut(s) 260
AoxI GGCC 1 cut(s) 53
ApeKI GCWGC 1 cut(s) 364
AspLEI GCGC 1 cut(s) 216
AspS9I GGNCC 1 cut(s) 425
AvaII GGWCC 1 cut(s) 425
BbvI GCAGC 1 cut(s) 351
BccI CCATC 2 cut(s) 67, 164
BciT130I CCWGG 1 cut(s) 520
BfaI CTAG 1 cut(s) 125
BisI GCNGC 1 cut(s) 365
BlsI GCNGC 1 cut(s) 366
Bme1390I CCNGG 1 cut(s) 520
Bme18I GGWCC 1 cut(s) 425
BmgBI CACGTC 1 cut(s) 219
BmgT120I GGNCC 1 cut(s) 425
BmrFI CCNGG 1 cut(s) 520
BmrI ACTGGG 1 cut(s) 479
BmsI GCATC 1 cut(s) 454
BmuI ACTGGG 1 cut(s) 479
BpmI CTGGAG 1 cut(s) 295
Bsa29I ATCGAT 1 cut(s) 489
BsaAI YACGTR 1 cut(s) 341
BsaJI CCNNGG 1 cut(s) 368
Bse1I ACTGG 2 cut(s) 289, 474
Bse3DI GCAATG 1 cut(s) 13
BseBI CCWGG 1 cut(s) 520
BseCI ATCGAT 1 cut(s) 489
BseDI CCNNGG 1 cut(s) 368
BseGI GGATG 2 cut(s) 202, 469
BseMI GCAATG 1 cut(s) 13
BseMII CTCAG 2 cut(s) 71, 166
BseNI ACTGG 2 cut(s) 289, 474
BseXI GCAGC 1 cut(s) 351
Bsh1236I CGCG 1 cut(s) 120
BshFI GGCC 1 cut(s) 55
BshVI ATCGAT 1 cut(s) 489
BslFI GGGAC 1 cut(s) 192
BsmFI GGGAC 1 cut(s) 192
BsnI GGCC 1 cut(s) 55
Bsp143I GATC 6 cut(s) 60, 265, 343, 434, 481, 486
BspANI GGCC 1 cut(s) 55
BspCNI CTCAG 2 cut(s) 70, 165
BspDI ATCGAT 1 cut(s) 489
BspFNI CGCG 1 cut(s) 120
BspPI GGATC 1 cut(s) 260
BsrDI GCAATG 1 cut(s) 13
BsrI ACTGG 2 cut(s) 289, 474
BssECI CCNNGG 1 cut(s) 368
BssMI GATC 6 cut(s) 60, 265, 343, 434, 481, 486
BssT1I CCWWGG 1 cut(s) 368
Bst2UI CCWGG 1 cut(s) 520
Bst4CI ACNGT 1 cut(s) 165
BstBAI YACGTR 1 cut(s) 341
BstDEI CTNAG 2 cut(s) 57, 152
BstF5I GGATG 2 cut(s) 202, 469
BstFNI CGCG 1 cut(s) 120
BstHHI GCGC 1 cut(s) 216
BstKTI GATC 6 cut(s) 63, 268, 346, 437, 484, 489
BstMBI GATC 6 cut(s) 60, 265, 343, 434, 481, 486
BstNI CCWGG 1 cut(s) 520
BstSCI CCNGG 1 cut(s) 518
BstUI CGCG 1 cut(s) 120
BstV1I GCAGC 1 cut(s) 351
BstX2I RGATCY 1 cut(s) 265
BstYI RGATCY 1 cut(s) 265
Bsu15I ATCGAT 1 cut(s) 489
BsuRI GGCC 1 cut(s) 55
BsuTUI ATCGAT 1 cut(s) 489
BtrI CACGTC 1 cut(s) 219
BtsCI GGATG 2 cut(s) 202, 469
BtsIMutI CAGTG 1 cut(s) 467
CfoI GCGC 1 cut(s) 216
Cfr13I GGNCC 1 cut(s) 425
ClaI ATCGAT 1 cut(s) 489
CsiI ACCWGGT 1 cut(s) 518
CviAII CATG 3 cut(s) 137, 317, 327
CviJI RGCY 5 cut(s) 26, 44, 55, 227, 456
CviKI_1 RGCY 5 cut(s) 26, 44, 55, 227, 456
DdeI CTNAG 2 cut(s) 57, 152
DpnI GATC 6 cut(s) 62, 267, 345, 436, 483, 488
DpnII GATC 6 cut(s) 60, 265, 343, 434, 481, 486
Eco130I CCWWGG 1 cut(s) 368
Eco147I AGGCCT 1 cut(s) 55
Eco47I GGWCC 1 cut(s) 425
EcoRII CCWGG 1 cut(s) 518
EcoT14I CCWWGG 1 cut(s) 368
ErhI CCWWGG 1 cut(s) 368
FaeI CATG 3 cut(s) 140, 320, 330
FaiI YATR 8 cut(s) 138, 234, 242, 306, 318, 328, 356, 477
FaqI GGGAC 1 cut(s) 192
FatI CATG 3 cut(s) 136, 316, 326
FblI GTMKAC 1 cut(s) 112
Fnu4HI GCNGC 1 cut(s) 365
FokI GGATG 2 cut(s) 209, 476
Fsp4HI GCNGC 1 cut(s) 365
FspAI RTGCGCAY 1 cut(s) 215
FspBI CTAG 1 cut(s) 125
FspI TGCGCA 1 cut(s) 215
GlaI GCGC 1 cut(s) 215
GluI GCNGC 1 cut(s) 365
GsuI CTGGAG 1 cut(s) 295
HaeIII GGCC 1 cut(s) 55
HhaI GCGC 1 cut(s) 216
Hin1II CATG 3 cut(s) 140, 320, 330
Hin6I GCGC 1 cut(s) 214
HinP1I GCGC 1 cut(s) 214
HincII GTYRAC 1 cut(s) 376
HindII GTYRAC 1 cut(s) 376
HinfI GANTC 2 cut(s) 288, 359
HpaI GTTAAC 1 cut(s) 376
Hpy166II GTNNAC 2 cut(s) 113, 376
Hpy188I TCNGA 5 cut(s) 60, 72, 169, 439, 486
Hpy188III TCNNGA 2 cut(s) 187, 261
Hpy8I GTNNAC 2 cut(s) 113, 376
Hpy99I CGWCG 1 cut(s) 19
HpyCH4III ACNGT 1 cut(s) 165
HpyCH4IV ACGT 2 cut(s) 218, 340
HpyCH4V TGCA 4 cut(s) 11, 140, 302, 467
HpyF3I CTNAG 2 cut(s) 57, 152
HpySE526I ACGT 2 cut(s) 218, 340
Hsp92II CATG 3 cut(s) 140, 320, 330
HspAI GCGC 1 cut(s) 214
KspAI GTTAAC 1 cut(s) 376
Kzo9I GATC 6 cut(s) 60, 265, 343, 434, 481, 486
LmnI GCTCC 1 cut(s) 506
LpnPI CCDG 6 cut(s) 172, 259, 270, 322, 455, 505
Lsp1109I GCAGC 1 cut(s) 351
LweI GCATC 1 cut(s) 454
MabI ACCWGGT 1 cut(s) 518
MaeI CTAG 1 cut(s) 125
MaeII ACGT 2 cut(s) 218, 340
MalI GATC 6 cut(s) 62, 267, 345, 436, 483, 488
MboI GATC 6 cut(s) 60, 265, 343, 434, 481, 486
MboII GAAGA 1 cut(s) 523
MfeI CAATTG 1 cut(s) 332
MflI RGATCY 1 cut(s) 265
MluCI AATT 3 cut(s) 246, 332, 526
MlyI GAGTC 1 cut(s) 353
MmeI TCCRAC 1 cut(s) 139
MnlI CCTC 7 cut(s) 24, 66, 139, 187, 279, 438, 446
MseI TTAA 3 cut(s) 95, 375, 529
MslI CAYNNNNRTG 1 cut(s) 309
MspR9I CCNGG 1 cut(s) 520
MunI CAATTG 1 cut(s) 332
MvaI CCWGG 1 cut(s) 520
MvnI CGCG 1 cut(s) 120
NdeII GATC 6 cut(s) 60, 265, 343, 434, 481, 486
NlaIII CATG 3 cut(s) 140, 320, 330
NsbI TGCGCA 1 cut(s) 215
PceI AGGCCT 1 cut(s) 55
PfeI GAWTC 1 cut(s) 288
PkrI GCNGC 1 cut(s) 366
PleI GAGTC 1 cut(s) 353
PpsI GAGTC 1 cut(s) 353
Ppu21I YACGTR 1 cut(s) 341
Psp6I CCWGG 1 cut(s) 518
PspGI CCWGG 1 cut(s) 518
PspPI GGNCC 1 cut(s) 425
PsuI RGATCY 1 cut(s) 265
RseI CAYNNNNRTG 1 cut(s) 309
SaqAI TTAA 3 cut(s) 95, 375, 529
SatI GCNGC 1 cut(s) 365
Sau3AI GATC 6 cut(s) 60, 265, 343, 434, 481, 486
Sau96I GGNCC 1 cut(s) 425
SchI GAGTC 1 cut(s) 353
ScrFI CCNGG 1 cut(s) 520
SetI ASST 9 cut(s) 28, 112, 130, 150, 221, 254, 311, 343, 521
SexAI ACCWGGT 1 cut(s) 518
SfaNI GCATC 1 cut(s) 454
SinI GGWCC 1 cut(s) 425
SmiMI CAYNNNNRTG 1 cut(s) 309
Sse9I AATT 3 cut(s) 246, 332, 526
SseBI AGGCCT 1 cut(s) 55
SspMI CTAG 1 cut(s) 125
StuI AGGCCT 1 cut(s) 55
StyD4I CCNGG 1 cut(s) 518
StyI CCWWGG 1 cut(s) 368
TaaI ACNGT 1 cut(s) 165
TaiI ACGT 2 cut(s) 221, 343
TaqI TCGA 1 cut(s) 489
TasI AATT 3 cut(s) 246, 332, 526
TfiI GAWTC 1 cut(s) 288
Tru1I TTAA 3 cut(s) 95, 375, 529
Tru9I TTAA 3 cut(s) 95, 375, 529
TscAI CASTG 1 cut(s) 474
TseI GCWGC 1 cut(s) 364
TspDTI ATGAA 1 cut(s) 408
TspGWI ACGGA 2 cut(s) 206, 309
TspRI CASTG 1 cut(s) 474
VpaK11BI GGWCC 1 cut(s) 425
XmiI GTMKAC 1 cut(s) 112
XspI CTAG 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.