ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 386 |
| AgsI | TTSAA | 2 cut(s) | 61, 274 |
| AjnI | CCWGG | 3 cut(s) | 14, 191, 358 |
| AluBI | AGCT | 4 cut(s) | 56, 154, 176, 378 |
| AluI | AGCT | 4 cut(s) | 56, 154, 176, 378 |
| Alw26I | GTCTC | 4 cut(s) | 101, 121, 139, 303 |
| AoxI | GGCC | 1 cut(s) | 194 |
| AspLEI | GCGC | 2 cut(s) | 387, 396 |
| AspS9I | GGNCC | 1 cut(s) | 356 |
| AsuC2I | CCSGG | 1 cut(s) | 297 |
| AsuHPI | GGTGA | 1 cut(s) | 64 |
| AvaII | GGWCC | 1 cut(s) | 356 |
| BccI | CCATC | 3 cut(s) | 94, 217, 283 |
| BciT130I | CCWGG | 3 cut(s) | 16, 193, 360 |
| BclI | TGATCA | 1 cut(s) | 69 |
| BcnI | CCSGG | 1 cut(s) | 297 |
| BcoDI | GTCTC | 4 cut(s) | 101, 121, 139, 303 |
| BfaI | CTAG | 2 cut(s) | 149, 155 |
| Bme1390I | CCNGG | 4 cut(s) | 16, 193, 297, 360 |
| Bme18I | GGWCC | 1 cut(s) | 356 |
| BmgT120I | GGNCC | 1 cut(s) | 356 |
| BmiI | GGNNCC | 2 cut(s) | 294, 357 |
| BmrFI | CCNGG | 4 cut(s) | 16, 193, 297, 360 |
| BmsI | GCATC | 2 cut(s) | 39, 264 |
| BoxI | GACNNNNGTC | 1 cut(s) | 113 |
| BpuMI | CCSGG | 1 cut(s) | 297 |
| BsaI | GGTCTC | 1 cut(s) | 121 |
| BsaJI | CCNNGG | 1 cut(s) | 400 |
| BseBI | CCWGG | 3 cut(s) | 16, 193, 360 |
| BseDI | CCNNGG | 1 cut(s) | 400 |
| BseMII | CTCAG | 1 cut(s) | 134 |
| BshFI | GGCC | 1 cut(s) | 196 |
| BsiSI | CCGG | 1 cut(s) | 296 |
| BslFI | GGGAC | 1 cut(s) | 369 |
| BsmAI | GTCTC | 4 cut(s) | 101, 121, 139, 303 |
| BsmFI | GGGAC | 1 cut(s) | 369 |
| BsnI | GGCC | 1 cut(s) | 196 |
| Bso31I | GGTCTC | 1 cut(s) | 121 |
| Bsp143I | GATC | 1 cut(s) | 69 |
| Bsp19I | CCATGG | 1 cut(s) | 400 |
| BspANI | GGCC | 1 cut(s) | 196 |
| BspCNI | CTCAG | 1 cut(s) | 135 |
| BspLI | GGNNCC | 2 cut(s) | 294, 357 |
| BspTNI | GGTCTC | 1 cut(s) | 121 |
| BssECI | CCNNGG | 1 cut(s) | 400 |
| BssMI | GATC | 1 cut(s) | 69 |
| BssT1I | CCWWGG | 1 cut(s) | 400 |
| Bst2UI | CCWGG | 3 cut(s) | 16, 193, 360 |
| Bst4CI | ACNGT | 1 cut(s) | 170 |
| BstC8I | GCNNGC | 1 cut(s) | 54 |
| BstDEI | CTNAG | 1 cut(s) | 143 |
| BstDSI | CCRYGG | 1 cut(s) | 400 |
| BstHHI | GCGC | 2 cut(s) | 387, 396 |
| BstKTI | GATC | 1 cut(s) | 72 |
| BstMAI | GTCTC | 4 cut(s) | 101, 121, 139, 303 |
| BstMBI | GATC | 1 cut(s) | 69 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 384, 391, 393 |
| BstNI | CCWGG | 3 cut(s) | 16, 193, 360 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 113 |
| BstSCI | CCNGG | 4 cut(s) | 14, 191, 295, 358 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 199 |
| BsuRI | GGCC | 1 cut(s) | 196 |
| BtgI | CCRYGG | 1 cut(s) | 400 |
| Cac8I | GCNNGC | 1 cut(s) | 54 |
| CfoI | GCGC | 2 cut(s) | 387, 396 |
| Cfr13I | GGNCC | 1 cut(s) | 356 |
| CseI | GACGC | 2 cut(s) | 337, 372 |
| CviAII | CATG | 2 cut(s) | 133, 401 |
| CviJI | RGCY | 7 cut(s) | 56, 154, 176, 186, 191, 196, 378 |
| CviKI_1 | RGCY | 7 cut(s) | 56, 154, 176, 186, 191, 196, 378 |
| DdeI | CTNAG | 1 cut(s) | 143 |
| DpnI | GATC | 1 cut(s) | 71 |
| DpnII | GATC | 1 cut(s) | 69 |
| Eco130I | CCWWGG | 1 cut(s) | 400 |
| Eco147I | AGGCCT | 1 cut(s) | 196 |
| Eco31I | GGTCTC | 1 cut(s) | 121 |
| Eco47I | GGWCC | 1 cut(s) | 356 |
| EcoO109I | RGGNCCY | 1 cut(s) | 356 |
| EcoRII | CCWGG | 3 cut(s) | 14, 191, 358 |
| EcoT14I | CCWWGG | 1 cut(s) | 400 |
| ErhI | CCWWGG | 1 cut(s) | 400 |
| FaeI | CATG | 2 cut(s) | 136, 404 |
| FaiI | YATR | 3 cut(s) | 134, 326, 402 |
| FaqI | GGGAC | 1 cut(s) | 369 |
| FatI | CATG | 2 cut(s) | 132, 400 |
| FbaI | TGATCA | 1 cut(s) | 69 |
| FspBI | CTAG | 2 cut(s) | 149, 155 |
| FspI | TGCGCA | 1 cut(s) | 386 |
| GlaI | GCGC | 2 cut(s) | 386, 395 |
| HaeIII | GGCC | 1 cut(s) | 196 |
| HapII | CCGG | 1 cut(s) | 296 |
| HgaI | GACGC | 2 cut(s) | 337, 372 |
| HhaI | GCGC | 2 cut(s) | 387, 396 |
| Hin1II | CATG | 2 cut(s) | 136, 404 |
| Hin6I | GCGC | 2 cut(s) | 385, 394 |
| HinP1I | GCGC | 2 cut(s) | 385, 394 |
| HindIII | AAGCTT | 1 cut(s) | 54 |
| HinfI | GANTC | 3 cut(s) | 30, 41, 122 |
| HpaII | CCGG | 1 cut(s) | 296 |
| HphI | GGTGA | 1 cut(s) | 64 |
| Hpy188I | TCNGA | 4 cut(s) | 121, 127, 144, 245 |
| Hpy188III | TCNNGA | 1 cut(s) | 373 |
| HpyAV | CCTTC | 2 cut(s) | 55, 379 |
| HpyCH4III | ACNGT | 1 cut(s) | 170 |
| HpyCH4V | TGCA | 2 cut(s) | 52, 208 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 384, 391, 393 |
| HpyF3I | CTNAG | 1 cut(s) | 143 |
| Hsp92II | CATG | 2 cut(s) | 136, 404 |
| HspAI | GCGC | 2 cut(s) | 385, 394 |
| Ksp22I | TGATCA | 1 cut(s) | 69 |
| Kzo9I | GATC | 1 cut(s) | 69 |
| LmnI | GCTCC | 1 cut(s) | 371 |
| LpnPI | CCDG | 7 cut(s) | 28, 178, 205, 210, 309, 345, 372 |
| LweI | GCATC | 2 cut(s) | 39, 264 |
| MaeI | CTAG | 2 cut(s) | 149, 155 |
| MaeIII | GTNAC | 1 cut(s) | 349 |
| MalI | GATC | 1 cut(s) | 71 |
| MboI | GATC | 1 cut(s) | 69 |
| MluCI | AATT | 3 cut(s) | 19, 65, 227 |
| MlyI | GAGTC | 1 cut(s) | 35 |
| MseI | TTAA | 1 cut(s) | 101 |
| MslI | CAYNNNNRTG | 1 cut(s) | 266 |
| MspI | CCGG | 1 cut(s) | 296 |
| MspR9I | CCNGG | 4 cut(s) | 16, 193, 297, 360 |
| MvaI | CCWGG | 3 cut(s) | 16, 193, 360 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 384, 391, 393 |
| NciI | CCSGG | 1 cut(s) | 297 |
| NcoI | CCATGG | 1 cut(s) | 400 |
| NdeII | GATC | 1 cut(s) | 69 |
| NlaIII | CATG | 2 cut(s) | 136, 404 |
| NlaIV | GGNNCC | 2 cut(s) | 294, 357 |
| NmuCI | GTSAC | 1 cut(s) | 349 |
| NsbI | TGCGCA | 1 cut(s) | 386 |
| PceI | AGGCCT | 1 cut(s) | 196 |
| PfeI | GAWTC | 2 cut(s) | 30, 122 |
| PfoI | TCCNGGA | 1 cut(s) | 295 |
| PleI | GAGTC | 1 cut(s) | 35 |
| PpsI | GAGTC | 1 cut(s) | 35 |
| PpuMI | RGGWCCY | 1 cut(s) | 356 |
| PshAI | GACNNNNGTC | 1 cut(s) | 113 |
| Psp5II | RGGWCCY | 1 cut(s) | 356 |
| Psp6I | CCWGG | 3 cut(s) | 14, 191, 358 |
| PspGI | CCWGG | 3 cut(s) | 14, 191, 358 |
| PspN4I | GGNNCC | 2 cut(s) | 294, 357 |
| PspPI | GGNCC | 1 cut(s) | 356 |
| PspPPI | RGGWCCY | 1 cut(s) | 356 |
| RseI | CAYNNNNRTG | 1 cut(s) | 266 |
| SaqAI | TTAA | 1 cut(s) | 101 |
| Sau3AI | GATC | 1 cut(s) | 69 |
| Sau96I | GGNCC | 1 cut(s) | 356 |
| SchI | GAGTC | 1 cut(s) | 35 |
| ScrFI | CCNGG | 4 cut(s) | 16, 193, 297, 360 |
| SetI | ASST | 9 cut(s) | 17, 58, 117, 156, 160, 178, 241, 361, 380 |
| SfaNI | GCATC | 2 cut(s) | 39, 264 |
| SinI | GGWCC | 1 cut(s) | 356 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 266 |
| Sse9I | AATT | 3 cut(s) | 19, 65, 227 |
| SseBI | AGGCCT | 1 cut(s) | 196 |
| SspMI | CTAG | 2 cut(s) | 149, 155 |
| StuI | AGGCCT | 1 cut(s) | 196 |
| StyD4I | CCNGG | 4 cut(s) | 14, 191, 295, 358 |
| StyI | CCWWGG | 1 cut(s) | 400 |
| TaaI | ACNGT | 1 cut(s) | 170 |
| TasI | AATT | 3 cut(s) | 19, 65, 227 |
| TfiI | GAWTC | 2 cut(s) | 30, 122 |
| Tru1I | TTAA | 1 cut(s) | 101 |
| Tru9I | TTAA | 1 cut(s) | 101 |
| TseFI | GTSAC | 1 cut(s) | 349 |
| Tsp45I | GTSAC | 1 cut(s) | 349 |
| TspDTI | ATGAA | 2 cut(s) | 17, 149 |
| TspGWI | ACGGA | 1 cut(s) | 34 |
| VpaK11BI | GGWCC | 1 cut(s) | 356 |
| XspI | CTAG | 2 cut(s) | 149, 155 |