ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 10 |
| AccIII | TCCGGA | 1 cut(s) | 130 |
| AciI | CCGC | 1 cut(s) | 10 |
| AclWI | GGATC | 1 cut(s) | 48 |
| AcoI | YGGCCR | 1 cut(s) | 239 |
| AcsI | RAATTY | 1 cut(s) | 207 |
| AcuI | CTGAAG | 1 cut(s) | 174 |
| AfaI | GTAC | 1 cut(s) | 66 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 35, 36, 137 |
| AgsI | TTSAA | 1 cut(s) | 103 |
| AjnI | CCWGG | 1 cut(s) | 266 |
| AluBI | AGCT | 5 cut(s) | 83, 152, 180, 280, 331 |
| AluI | AGCT | 5 cut(s) | 83, 152, 180, 280, 331 |
| Alw21I | GWGCWC | 2 cut(s) | 204, 262 |
| Alw44I | GTGCAC | 2 cut(s) | 200, 258 |
| AlwI | GGATC | 1 cut(s) | 48 |
| Aor13HI | TCCGGA | 1 cut(s) | 130 |
| AoxI | GGCC | 2 cut(s) | 239, 264 |
| ApaLI | GTGCAC | 2 cut(s) | 200, 258 |
| ApeKI | GCWGC | 2 cut(s) | 280, 295 |
| ApoI | RAATTY | 1 cut(s) | 207 |
| AspLEI | GCGC | 1 cut(s) | 10 |
| AspS9I | GGNCC | 4 cut(s) | 124, 264, 310, 349 |
| AvaII | GGWCC | 3 cut(s) | 124, 310, 349 |
| BaeGI | GKGCMC | 2 cut(s) | 204, 262 |
| BalI | TGGCCA | 1 cut(s) | 241 |
| Bbv12I | GWGCWC | 2 cut(s) | 204, 262 |
| BbvI | GCAGC | 2 cut(s) | 267, 282 |
| BccI | CCATC | 1 cut(s) | 135 |
| BciT130I | CCWGG | 1 cut(s) | 268 |
| BfmI | CTRYAG | 1 cut(s) | 296 |
| BisI | GCNGC | 2 cut(s) | 281, 296 |
| BlpI | GCTNAGC | 1 cut(s) | 327 |
| BlsI | GCNGC | 2 cut(s) | 282, 297 |
| Bme1390I | CCNGG | 1 cut(s) | 268 |
| Bme18I | GGWCC | 3 cut(s) | 124, 310, 349 |
| BmgT120I | GGNCC | 4 cut(s) | 124, 264, 310, 349 |
| BmrFI | CCNGG | 1 cut(s) | 268 |
| BmsI | GCATC | 1 cut(s) | 80 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 327 |
| BpuEI | CTTGAG | 1 cut(s) | 63 |
| BsaJI | CCNNGG | 1 cut(s) | 267 |
| BsaWI | WCCGGW | 1 cut(s) | 130 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 35, 36, 137 |
| Bse1I | ACTGG | 1 cut(s) | 72 |
| BseAI | TCCGGA | 1 cut(s) | 130 |
| BseBI | CCWGG | 1 cut(s) | 268 |
| BseDI | CCNNGG | 1 cut(s) | 267 |
| BseGI | GGATG | 1 cut(s) | 127 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 35, 36, 137 |
| BseMII | CTCAG | 1 cut(s) | 318 |
| BseNI | ACTGG | 1 cut(s) | 72 |
| BseRI | GAGGAG | 1 cut(s) | 66 |
| BseSI | GKGCMC | 2 cut(s) | 204, 262 |
| BseXI | GCAGC | 2 cut(s) | 267, 282 |
| Bsh1236I | CGCG | 1 cut(s) | 10 |
| BshFI | GGCC | 2 cut(s) | 241, 266 |
| BsiHKAI | GWGCWC | 2 cut(s) | 204, 262 |
| BsiSI | CCGG | 1 cut(s) | 131 |
| BslFI | GGGAC | 1 cut(s) | 315 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 35, 36, 137 |
| BsmFI | GGGAC | 1 cut(s) | 315 |
| BsnI | GGCC | 2 cut(s) | 241, 266 |
| Bsp1286I | GDGCHC | 2 cut(s) | 204, 262 |
| Bsp13I | TCCGGA | 1 cut(s) | 130 |
| Bsp143I | GATC | 1 cut(s) | 40 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 327 |
| BspACI | CCGC | 1 cut(s) | 10 |
| BspANI | GGCC | 2 cut(s) | 241, 266 |
| BspCNI | CTCAG | 1 cut(s) | 319 |
| BspEI | TCCGGA | 1 cut(s) | 130 |
| BspFNI | CGCG | 1 cut(s) | 10 |
| BspMAI | CTGCAG | 1 cut(s) | 300 |
| BspPI | GGATC | 1 cut(s) | 48 |
| BsrI | ACTGG | 1 cut(s) | 72 |
| BssECI | CCNNGG | 1 cut(s) | 267 |
| BssMI | GATC | 1 cut(s) | 40 |
| Bst2UI | CCWGG | 1 cut(s) | 268 |
| Bst4CI | ACNGT | 2 cut(s) | 145, 175 |
| BstDEI | CTNAG | 2 cut(s) | 284, 327 |
| BstF5I | GGATG | 1 cut(s) | 127 |
| BstFNI | CGCG | 1 cut(s) | 10 |
| BstHHI | GCGC | 1 cut(s) | 10 |
| BstKTI | GATC | 1 cut(s) | 43 |
| BstMBI | GATC | 1 cut(s) | 40 |
| BstNI | CCWGG | 1 cut(s) | 268 |
| BstSCI | CCNGG | 1 cut(s) | 266 |
| BstSFI | CTRYAG | 1 cut(s) | 296 |
| BstSLI | GKGCMC | 2 cut(s) | 204, 262 |
| BstUI | CGCG | 1 cut(s) | 10 |
| BstV1I | GCAGC | 2 cut(s) | 267, 282 |
| BsuRI | GGCC | 2 cut(s) | 241, 266 |
| BtsCI | GGATG | 1 cut(s) | 127 |
| BtsIMutI | CAGTG | 1 cut(s) | 171 |
| CfoI | GCGC | 1 cut(s) | 10 |
| Cfr13I | GGNCC | 4 cut(s) | 124, 264, 310, 349 |
| Csp6I | GTAC | 1 cut(s) | 65 |
| CviAII | CATG | 3 cut(s) | 35, 44, 187 |
| CviJI | RGCY | 9 cut(s) | 83, 152, 180, 241, 266, 280, 295, 331, 384 |
| CviKI_1 | RGCY | 9 cut(s) | 83, 152, 180, 241, 266, 280, 295, 331, 384 |
| CviQI | GTAC | 1 cut(s) | 65 |
| DdeI | CTNAG | 2 cut(s) | 284, 327 |
| DpnI | GATC | 1 cut(s) | 42 |
| DpnII | GATC | 1 cut(s) | 40 |
| EaeI | YGGCCR | 1 cut(s) | 239 |
| Eco47I | GGWCC | 3 cut(s) | 124, 310, 349 |
| Eco57I | CTGAAG | 1 cut(s) | 174 |
| EcoRI | GAATTC | 1 cut(s) | 207 |
| EcoRII | CCWGG | 1 cut(s) | 266 |
| FaeI | CATG | 3 cut(s) | 38, 47, 190 |
| FaiI | YATR | 3 cut(s) | 36, 45, 188 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 235, 267 |
| FaqI | GGGAC | 1 cut(s) | 315 |
| FatI | CATG | 3 cut(s) | 34, 43, 186 |
| FauI | CCCGC | 1 cut(s) | 3 |
| Fnu4HI | GCNGC | 2 cut(s) | 281, 296 |
| FokI | GGATG | 1 cut(s) | 114 |
| Fsp4HI | GCNGC | 2 cut(s) | 281, 296 |
| GlaI | GCGC | 1 cut(s) | 9 |
| GluI | GCNGC | 2 cut(s) | 281, 296 |
| HaeIII | GGCC | 2 cut(s) | 241, 266 |
| HapII | CCGG | 1 cut(s) | 131 |
| HhaI | GCGC | 1 cut(s) | 10 |
| Hin1II | CATG | 3 cut(s) | 38, 47, 190 |
| Hin6I | GCGC | 1 cut(s) | 8 |
| HinP1I | GCGC | 1 cut(s) | 8 |
| HpaII | CCGG | 1 cut(s) | 131 |
| Hpy166II | GTNNAC | 3 cut(s) | 124, 202, 260 |
| Hpy188I | TCNGA | 1 cut(s) | 90 |
| Hpy188III | TCNNGA | 3 cut(s) | 131, 194, 338 |
| Hpy8I | GTNNAC | 3 cut(s) | 124, 202, 260 |
| Hpy99I | CGWCG | 1 cut(s) | 90 |
| HpyAV | CCTTC | 2 cut(s) | 149, 323 |
| HpyCH4III | ACNGT | 2 cut(s) | 145, 175 |
| HpyCH4V | TGCA | 3 cut(s) | 202, 260, 298 |
| HpyF3I | CTNAG | 2 cut(s) | 284, 327 |
| Hsp92II | CATG | 3 cut(s) | 38, 47, 190 |
| HspAI | GCGC | 1 cut(s) | 8 |
| Kpn2I | TCCGGA | 1 cut(s) | 130 |
| Kzo9I | GATC | 1 cut(s) | 40 |
| LmnI | GCTCC | 1 cut(s) | 31 |
| LpnPI | CCDG | 8 cut(s) | 53, 103, 144, 179, 253, 280, 284, 323 |
| Lsp1109I | GCAGC | 2 cut(s) | 267, 282 |
| LweI | GCATC | 1 cut(s) | 80 |
| MaeIII | GTNAC | 2 cut(s) | 13, 167 |
| MalI | GATC | 1 cut(s) | 42 |
| MboI | GATC | 1 cut(s) | 40 |
| MhlI | GDGCHC | 2 cut(s) | 204, 262 |
| MlsI | TGGCCA | 1 cut(s) | 241 |
| MluCI | AATT | 1 cut(s) | 207 |
| MluNI | TGGCCA | 1 cut(s) | 241 |
| MmeI | TCCRAC | 2 cut(s) | 68, 87 |
| MnlI | CCTC | 5 cut(s) | 87, 239, 281, 285, 362 |
| Mox20I | TGGCCA | 1 cut(s) | 241 |
| MroI | TCCGGA | 1 cut(s) | 130 |
| MscI | TGGCCA | 1 cut(s) | 241 |
| MseI | TTAA | 1 cut(s) | 231 |
| Msp20I | TGGCCA | 1 cut(s) | 241 |
| MspI | CCGG | 1 cut(s) | 131 |
| MspR9I | CCNGG | 1 cut(s) | 268 |
| MvaI | CCWGG | 1 cut(s) | 268 |
| MvnI | CGCG | 1 cut(s) | 10 |
| NdeII | GATC | 1 cut(s) | 40 |
| NlaIII | CATG | 3 cut(s) | 38, 47, 190 |
| NmuCI | GTSAC | 1 cut(s) | 13 |
| PkrI | GCNGC | 2 cut(s) | 282, 297 |
| Psp6I | CCWGG | 1 cut(s) | 266 |
| PspGI | CCWGG | 1 cut(s) | 266 |
| PspPI | GGNCC | 4 cut(s) | 124, 264, 310, 349 |
| PstI | CTGCAG | 1 cut(s) | 300 |
| RsaI | GTAC | 1 cut(s) | 66 |
| RsaNI | GTAC | 1 cut(s) | 65 |
| SaqAI | TTAA | 1 cut(s) | 231 |
| SatI | GCNGC | 2 cut(s) | 281, 296 |
| Sau3AI | GATC | 1 cut(s) | 40 |
| Sau96I | GGNCC | 4 cut(s) | 124, 264, 310, 349 |
| ScrFI | CCNGG | 1 cut(s) | 268 |
| SduI | GDGCHC | 2 cut(s) | 204, 262 |
| SetI | ASST | 8 cut(s) | 85, 101, 154, 182, 282, 315, 333, 354 |
| SfaNI | GCATC | 1 cut(s) | 80 |
| SfcI | CTRYAG | 1 cut(s) | 296 |
| SinI | GGWCC | 3 cut(s) | 124, 310, 349 |
| SmlI | CTYRAG | 1 cut(s) | 78 |
| SmoI | CTYRAG | 1 cut(s) | 78 |
| Sse9I | AATT | 1 cut(s) | 207 |
| SsiI | CCGC | 1 cut(s) | 10 |
| StyD4I | CCNGG | 1 cut(s) | 266 |
| TaaI | ACNGT | 2 cut(s) | 145, 175 |
| TasI | AATT | 1 cut(s) | 207 |
| TatI | WGTACW | 1 cut(s) | 64 |
| Tru1I | TTAA | 1 cut(s) | 231 |
| Tru9I | TTAA | 1 cut(s) | 231 |
| TscAI | CASTG | 1 cut(s) | 178 |
| TseFI | GTSAC | 1 cut(s) | 13 |
| TseI | GCWGC | 2 cut(s) | 280, 295 |
| Tsp45I | GTSAC | 1 cut(s) | 13 |
| TspDTI | ATGAA | 2 cut(s) | 23, 323 |
| TspRI | CASTG | 1 cut(s) | 178 |
| VneI | GTGCAC | 2 cut(s) | 200, 258 |
| VpaK11BI | GGWCC | 3 cut(s) | 124, 310, 349 |
| XapI | RAATTY | 1 cut(s) | 207 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 134 |