Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| B3 | PF02362 | 42 - 122 | 7.6e-08 | B3 DNA binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 171 |
| AciI | CCGC | 4 cut(s) | 65, 107, 201, 240 |
| AclWI | GGATC | 1 cut(s) | 117 |
| AcoI | YGGCCR | 2 cut(s) | 3, 212 |
| AcsI | RAATTY | 2 cut(s) | 92, 524 |
| AcuI | CTGAAG | 1 cut(s) | 642 |
| AfaI | GTAC | 1 cut(s) | 591 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 200, 398 |
| AgsI | TTSAA | 5 cut(s) | 91, 350, 364, 523, 721 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 12, 44 |
| AluBI | AGCT | 3 cut(s) | 81, 407, 444 |
| AluI | AGCT | 3 cut(s) | 81, 407, 444 |
| Alw26I | GTCTC | 2 cut(s) | 468, 636 |
| AlwI | GGATC | 1 cut(s) | 117 |
| AoxI | GGCC | 2 cut(s) | 3, 212 |
| ApeKI | GCWGC | 1 cut(s) | 104 |
| ApoI | RAATTY | 2 cut(s) | 92, 524 |
| AsuHPI | GGTGA | 2 cut(s) | 595, 674 |
| BalI | TGGCCA | 2 cut(s) | 5, 214 |
| BbvI | GCAGC | 1 cut(s) | 91 |
| BccI | CCATC | 3 cut(s) | 113, 261, 614 |
| BciVI | GTATCC | 1 cut(s) | 560 |
| BcoDI | GTCTC | 2 cut(s) | 468, 636 |
| BfaI | CTAG | 2 cut(s) | 468, 729 |
| BfmI | CTRYAG | 1 cut(s) | 561 |
| BfuI | GTATCC | 1 cut(s) | 560 |
| BisI | GCNGC | 1 cut(s) | 105 |
| BlsI | GCNGC | 1 cut(s) | 106 |
| BmiI | GGNNCC | 1 cut(s) | 192 |
| BmrI | ACTGGG | 1 cut(s) | 386 |
| BmsI | GCATC | 3 cut(s) | 404, 434, 467 |
| BmuI | ACTGGG | 1 cut(s) | 386 |
| BpuEI | CTTGAG | 1 cut(s) | 170 |
| BsaBI | GATNNNNATC | 1 cut(s) | 571 |
| BsaI | GGTCTC | 2 cut(s) | 468, 636 |
| BsaJI | CCNNGG | 1 cut(s) | 209 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 275, 305 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 200, 398 |
| Bse1I | ACTGG | 3 cut(s) | 215, 228, 392 |
| Bse8I | GATNNNNATC | 1 cut(s) | 571 |
| BseDI | CCNNGG | 1 cut(s) | 209 |
| BseGI | GGATG | 3 cut(s) | 272, 419, 425 |
| BseJI | GATNNNNATC | 1 cut(s) | 571 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 200, 398 |
| BseNI | ACTGG | 3 cut(s) | 215, 228, 392 |
| BseRI | GAGGAG | 1 cut(s) | 417 |
| BseXI | GCAGC | 1 cut(s) | 91 |
| BshFI | GGCC | 2 cut(s) | 5, 214 |
| BslFI | GGGAC | 1 cut(s) | 545 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 200, 398 |
| BsmAI | GTCTC | 2 cut(s) | 468, 636 |
| BsmFI | GGGAC | 1 cut(s) | 545 |
| BsnI | GGCC | 2 cut(s) | 5, 214 |
| Bso31I | GGTCTC | 2 cut(s) | 468, 636 |
| Bsp143I | GATC | 1 cut(s) | 109 |
| BspACI | CCGC | 4 cut(s) | 65, 107, 201, 240 |
| BspANI | GGCC | 2 cut(s) | 5, 214 |
| BspHI | TCATGA | 1 cut(s) | 496 |
| BspLI | GGNNCC | 1 cut(s) | 192 |
| BspMAI | CTGCAG | 1 cut(s) | 565 |
| BspPI | GGATC | 1 cut(s) | 117 |
| BspTNI | GGTCTC | 2 cut(s) | 468, 636 |
| BsrI | ACTGG | 3 cut(s) | 215, 228, 392 |
| BssECI | CCNNGG | 1 cut(s) | 209 |
| BssMI | GATC | 1 cut(s) | 109 |
| BssT1I | CCWWGG | 1 cut(s) | 209 |
| Bst4CI | ACNGT | 1 cut(s) | 276 |
| Bst6I | CTCTTC | 1 cut(s) | 43 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 464 |
| BstEII | GGTNACC | 3 cut(s) | 242, 255, 386 |
| BstF5I | GGATG | 3 cut(s) | 272, 419, 425 |
| BstKTI | GATC | 1 cut(s) | 112 |
| BstMAI | GTCTC | 2 cut(s) | 468, 636 |
| BstMBI | GATC | 1 cut(s) | 109 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 464 |
| BstNSI | RCATGY | 1 cut(s) | 421 |
| BstPI | GGTNACC | 3 cut(s) | 242, 255, 386 |
| BstSFI | CTRYAG | 1 cut(s) | 561 |
| BstV1I | GCAGC | 1 cut(s) | 91 |
| BstX2I | RGATCY | 1 cut(s) | 109 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 267, 546 |
| BstYI | RGATCY | 1 cut(s) | 109 |
| BsuI | GTATCC | 1 cut(s) | 560 |
| BsuRI | GGCC | 2 cut(s) | 5, 214 |
| BtsCI | GGATG | 3 cut(s) | 272, 419, 425 |
| BtsIMutI | CAGTG | 1 cut(s) | 689 |
| CciI | TCATGA | 1 cut(s) | 496 |
| Csp6I | GTAC | 1 cut(s) | 590 |
| CviAII | CATG | 5 cut(s) | 56, 418, 497, 506, 725 |
| CviJI | RGCY | 8 cut(s) | 5, 26, 81, 139, 214, 407, 444, 538 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 26, 81, 139, 214, 407, 444, 538 |
| CviQI | GTAC | 1 cut(s) | 590 |
| DpnI | GATC | 1 cut(s) | 111 |
| DpnII | GATC | 1 cut(s) | 109 |
| DraI | TTTAAA | 1 cut(s) | 435 |
| EaeI | YGGCCR | 2 cut(s) | 3, 212 |
| Eam1104I | CTCTTC | 1 cut(s) | 43 |
| EarI | CTCTTC | 1 cut(s) | 43 |
| Eco130I | CCWWGG | 1 cut(s) | 209 |
| Eco31I | GGTCTC | 2 cut(s) | 468, 636 |
| Eco57I | CTGAAG | 1 cut(s) | 642 |
| Eco91I | GGTNACC | 3 cut(s) | 242, 255, 386 |
| EcoO65I | GGTNACC | 3 cut(s) | 242, 255, 386 |
| EcoT14I | CCWWGG | 1 cut(s) | 209 |
| EcoT22I | ATGCAT | 1 cut(s) | 419 |
| ErhI | CCWWGG | 1 cut(s) | 209 |
| FaeI | CATG | 5 cut(s) | 59, 421, 500, 509, 728 |
| FaqI | GGGAC | 1 cut(s) | 545 |
| FatI | CATG | 5 cut(s) | 55, 417, 496, 505, 724 |
| FauI | CCCGC | 1 cut(s) | 72 |
| FblI | GTMKAC | 1 cut(s) | 171 |
| Fnu4HI | GCNGC | 1 cut(s) | 105 |
| FokI | GGATG | 3 cut(s) | 279, 412, 426 |
| Fsp4HI | GCNGC | 1 cut(s) | 105 |
| FspBI | CTAG | 2 cut(s) | 468, 729 |
| GluI | GCNGC | 1 cut(s) | 105 |
| HaeIII | GGCC | 2 cut(s) | 5, 214 |
| Hin1II | CATG | 5 cut(s) | 59, 421, 500, 509, 728 |
| HindIII | AAGCTT | 1 cut(s) | 79 |
| HinfI | GANTC | 4 cut(s) | 71, 173, 249, 717 |
| HphI | GGTGA | 2 cut(s) | 595, 674 |
| Hpy166II | GTNNAC | 3 cut(s) | 172, 279, 397 |
| Hpy188I | TCNGA | 1 cut(s) | 33 |
| Hpy188III | TCNNGA | 2 cut(s) | 134, 497 |
| Hpy8I | GTNNAC | 3 cut(s) | 172, 279, 397 |
| HpyAV | CCTTC | 2 cut(s) | 118, 323 |
| HpyCH4III | ACNGT | 1 cut(s) | 276 |
| HpyCH4V | TGCA | 8 cut(s) | 357, 369, 417, 425, 458, 563, 598, 713 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 464 |
| Hsp92II | CATG | 5 cut(s) | 59, 421, 500, 509, 728 |
| Kzo9I | GATC | 1 cut(s) | 109 |
| LmnI | GCTCC | 2 cut(s) | 404, 449 |
| Lsp1109I | GCAGC | 1 cut(s) | 91 |
| LweI | GCATC | 3 cut(s) | 404, 434, 467 |
| MaeI | CTAG | 2 cut(s) | 468, 729 |
| MaeIII | GTNAC | 7 cut(s) | 12, 97, 242, 255, 386, 550, 643 |
| MalI | GATC | 1 cut(s) | 111 |
| MboI | GATC | 1 cut(s) | 109 |
| MboII | GAAGA | 1 cut(s) | 60 |
| MfeI | CAATTG | 1 cut(s) | 364 |
| MflI | RGATCY | 1 cut(s) | 109 |
| MlsI | TGGCCA | 2 cut(s) | 5, 214 |
| MluCI | AATT | 7 cut(s) | 92, 160, 196, 364, 430, 517, 524 |
| MluNI | TGGCCA | 2 cut(s) | 5, 214 |
| MlyI | GAGTC | 2 cut(s) | 65, 167 |
| MmeI | TCCRAC | 1 cut(s) | 713 |
| MnlI | CCTC | 5 cut(s) | 37, 44, 141, 395, 463 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 214 |
| Mph1103I | ATGCAT | 1 cut(s) | 419 |
| MscI | TGGCCA | 2 cut(s) | 5, 214 |
| MseI | TTAA | 1 cut(s) | 434 |
| MslI | CAYNNNNRTG | 2 cut(s) | 618, 639 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 214 |
| MspA1I | CMGCKG | 1 cut(s) | 67 |
| MunI | CAATTG | 1 cut(s) | 364 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 464 |
| NdeII | GATC | 1 cut(s) | 109 |
| NlaIII | CATG | 5 cut(s) | 59, 421, 500, 509, 728 |
| NlaIV | GGNNCC | 1 cut(s) | 192 |
| NmuCI | GTSAC | 3 cut(s) | 12, 550, 643 |
| NsiI | ATGCAT | 1 cut(s) | 419 |
| NspI | RCATGY | 1 cut(s) | 421 |
| PagI | TCATGA | 1 cut(s) | 496 |
| PfeI | GAWTC | 2 cut(s) | 249, 717 |
| PkrI | GCNGC | 1 cut(s) | 106 |
| PleI | GAGTC | 2 cut(s) | 65, 167 |
| PpsI | GAGTC | 2 cut(s) | 65, 167 |
| PspEI | GGTNACC | 3 cut(s) | 242, 255, 386 |
| PspN4I | GGNNCC | 1 cut(s) | 192 |
| PstI | CTGCAG | 1 cut(s) | 565 |
| PsuI | RGATCY | 1 cut(s) | 109 |
| RsaI | GTAC | 1 cut(s) | 591 |
| RsaNI | GTAC | 1 cut(s) | 590 |
| RseI | CAYNNNNRTG | 2 cut(s) | 618, 639 |
| SaqAI | TTAA | 1 cut(s) | 434 |
| SatI | GCNGC | 1 cut(s) | 105 |
| Sau3AI | GATC | 1 cut(s) | 109 |
| SchI | GAGTC | 2 cut(s) | 65, 167 |
| SfaNI | GCATC | 3 cut(s) | 404, 434, 467 |
| SfcI | CTRYAG | 1 cut(s) | 561 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 618, 639 |
| SmlI | CTYRAG | 1 cut(s) | 185 |
| SmoI | CTYRAG | 1 cut(s) | 185 |
| Sse9I | AATT | 7 cut(s) | 92, 160, 196, 364, 430, 517, 524 |
| SsiI | CCGC | 4 cut(s) | 65, 107, 201, 240 |
| SspMI | CTAG | 2 cut(s) | 468, 729 |
| StyI | CCWWGG | 1 cut(s) | 209 |
| TaaI | ACNGT | 1 cut(s) | 276 |
| TaqI | TCGA | 1 cut(s) | 609 |
| TaqII | GACCGA | 1 cut(s) | 492 |
| TasI | AATT | 7 cut(s) | 92, 160, 196, 364, 430, 517, 524 |
| TfiI | GAWTC | 2 cut(s) | 249, 717 |
| Tru1I | TTAA | 1 cut(s) | 434 |
| Tru9I | TTAA | 1 cut(s) | 434 |
| TscAI | CASTG | 1 cut(s) | 689 |
| TseFI | GTSAC | 3 cut(s) | 12, 550, 643 |
| TseI | GCWGC | 1 cut(s) | 104 |
| Tsp45I | GTSAC | 3 cut(s) | 12, 550, 643 |
| TspDTI | ATGAA | 3 cut(s) | 301, 342, 494 |
| TspGWI | ACGGA | 1 cut(s) | 414 |
| TspRI | CASTG | 1 cut(s) | 689 |
| XapI | RAATTY | 2 cut(s) | 92, 524 |
| XceI | RCATGY | 1 cut(s) | 421 |
| XmiI | GTMKAC | 1 cut(s) | 171 |
| XspI | CTAG | 2 cut(s) | 468, 729 |
| Zsp2I | ATGCAT | 1 cut(s) | 419 |