ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 130 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 40 |
| Acc36I | ACCTGC | 1 cut(s) | 130 |
| AccBSI | CCGCTC | 1 cut(s) | 106 |
| AccII | CGCG | 1 cut(s) | 64 |
| AciI | CCGC | 1 cut(s) | 104 |
| AclWI | GGATC | 1 cut(s) | 24 |
| AcoI | YGGCCR | 1 cut(s) | 27 |
| AfaI | GTAC | 1 cut(s) | 158 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 89 |
| AgeI | ACCGGT | 1 cut(s) | 159 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 189 |
| AjnI | CCWGG | 4 cut(s) | 38, 201, 238, 255 |
| AluBI | AGCT | 1 cut(s) | 177 |
| AluI | AGCT | 1 cut(s) | 177 |
| AlwI | GGATC | 1 cut(s) | 24 |
| AoxI | GGCC | 2 cut(s) | 27, 78 |
| ApeKI | GCWGC | 3 cut(s) | 177, 187, 260 |
| AsiGI | ACCGGT | 1 cut(s) | 159 |
| AspLEI | GCGC | 1 cut(s) | 64 |
| AspS9I | GGNCC | 1 cut(s) | 79 |
| AsuHPI | GGTGA | 1 cut(s) | 157 |
| BalI | TGGCCA | 1 cut(s) | 29 |
| BbvI | GCAGC | 3 cut(s) | 164, 199, 247 |
| BccI | CCATC | 1 cut(s) | 220 |
| BciT130I | CCWGG | 4 cut(s) | 40, 203, 240, 257 |
| BfuAI | ACCTGC | 1 cut(s) | 130 |
| BisI | GCNGC | 3 cut(s) | 178, 188, 261 |
| BlsI | GCNGC | 3 cut(s) | 179, 189, 262 |
| Bme1390I | CCNGG | 4 cut(s) | 40, 203, 240, 257 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 189 |
| BmgT120I | GGNCC | 1 cut(s) | 79 |
| BmiI | GGNNCC | 2 cut(s) | 81, 164 |
| BmrFI | CCNGG | 4 cut(s) | 40, 203, 240, 257 |
| BsaJI | CCNNGG | 3 cut(s) | 88, 134, 238 |
| BsaWI | WCCGGW | 1 cut(s) | 159 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 89 |
| Bse118I | RCCGGY | 1 cut(s) | 159 |
| Bse1I | ACTGG | 1 cut(s) | 18 |
| BseBI | CCWGG | 4 cut(s) | 40, 203, 240, 257 |
| BseDI | CCNNGG | 3 cut(s) | 88, 134, 238 |
| BseGI | GGATG | 2 cut(s) | 211, 231 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 89 |
| BseMII | CTCAG | 1 cut(s) | 327 |
| BseNI | ACTGG | 1 cut(s) | 18 |
| BseXI | GCAGC | 3 cut(s) | 164, 199, 247 |
| BsgI | GTGCAG | 1 cut(s) | 42 |
| Bsh1236I | CGCG | 1 cut(s) | 64 |
| Bsh1285I | CGRYCG | 1 cut(s) | 292 |
| BshFI | GGCC | 2 cut(s) | 29, 80 |
| BshTI | ACCGGT | 1 cut(s) | 159 |
| BsiEI | CGRYCG | 1 cut(s) | 292 |
| BsiSI | CCGG | 1 cut(s) | 160 |
| BslFI | GGGAC | 1 cut(s) | 221 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 89 |
| BsmFI | GGGAC | 1 cut(s) | 221 |
| BsnI | GGCC | 2 cut(s) | 29, 80 |
| Bsp143I | GATC | 2 cut(s) | 16, 289 |
| Bsp19I | CCATGG | 1 cut(s) | 88 |
| BspACI | CCGC | 1 cut(s) | 104 |
| BspANI | GGCC | 2 cut(s) | 29, 80 |
| BspCNI | CTCAG | 1 cut(s) | 326 |
| BspFNI | CGCG | 1 cut(s) | 64 |
| BspLI | GGNNCC | 2 cut(s) | 81, 164 |
| BspMI | ACCTGC | 1 cut(s) | 130 |
| BspPI | GGATC | 1 cut(s) | 24 |
| BsrBI | CCGCTC | 1 cut(s) | 106 |
| BsrFI | RCCGGY | 1 cut(s) | 159 |
| BsrI | ACTGG | 1 cut(s) | 18 |
| BssAI | RCCGGY | 1 cut(s) | 159 |
| BssECI | CCNNGG | 3 cut(s) | 88, 134, 238 |
| BssMI | GATC | 2 cut(s) | 16, 289 |
| BssT1I | CCWWGG | 1 cut(s) | 88 |
| Bst2UI | CCWGG | 4 cut(s) | 40, 203, 240, 257 |
| Bst4CI | ACNGT | 1 cut(s) | 58 |
| BstDEI | CTNAG | 1 cut(s) | 313 |
| BstDSI | CCRYGG | 1 cut(s) | 88 |
| BstF5I | GGATG | 2 cut(s) | 211, 231 |
| BstFNI | CGCG | 1 cut(s) | 64 |
| BstHHI | GCGC | 1 cut(s) | 64 |
| BstKTI | GATC | 2 cut(s) | 19, 292 |
| BstMBI | GATC | 2 cut(s) | 16, 289 |
| BstMCI | CGRYCG | 1 cut(s) | 292 |
| BstNI | CCWGG | 4 cut(s) | 40, 203, 240, 257 |
| BstSCI | CCNGG | 4 cut(s) | 38, 201, 238, 255 |
| BstUI | CGCG | 1 cut(s) | 64 |
| BstV1I | GCAGC | 3 cut(s) | 164, 199, 247 |
| BsuRI | GGCC | 2 cut(s) | 29, 80 |
| BtgI | CCRYGG | 1 cut(s) | 88 |
| BtsCI | GGATG | 2 cut(s) | 211, 231 |
| BtsI | GCAGTG | 1 cut(s) | 30 |
| BtsIMutI | CAGTG | 2 cut(s) | 30, 267 |
| BveI | ACCTGC | 1 cut(s) | 130 |
| CfoI | GCGC | 1 cut(s) | 64 |
| Cfr10I | RCCGGY | 1 cut(s) | 159 |
| Cfr13I | GGNCC | 1 cut(s) | 79 |
| CseI | GACGC | 3 cut(s) | 59, 179, 193 |
| CsiI | ACCWGGT | 1 cut(s) | 38 |
| Csp6I | GTAC | 1 cut(s) | 157 |
| CspAI | ACCGGT | 1 cut(s) | 159 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 203, 238, 256, 291 |
| CviAII | CATG | 2 cut(s) | 89, 98 |
| CviJI | RGCY | 6 cut(s) | 29, 80, 133, 177, 230, 260 |
| CviKI_1 | RGCY | 6 cut(s) | 29, 80, 133, 177, 230, 260 |
| CviQI | GTAC | 1 cut(s) | 157 |
| DdeI | CTNAG | 1 cut(s) | 313 |
| DpnI | GATC | 2 cut(s) | 18, 291 |
| DpnII | GATC | 2 cut(s) | 16, 289 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 40 |
| DriI | GACNNNNNGTC | 1 cut(s) | 189 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 40 |
| EaeI | YGGCCR | 1 cut(s) | 27 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 189 |
| Eco130I | CCWWGG | 1 cut(s) | 88 |
| EcoRII | CCWGG | 4 cut(s) | 38, 201, 238, 255 |
| EcoT14I | CCWWGG | 1 cut(s) | 88 |
| ErhI | CCWWGG | 1 cut(s) | 88 |
| FaeI | CATG | 2 cut(s) | 92, 101 |
| FaiI | YATR | 5 cut(s) | 90, 99, 251, 323, 325 |
| FaqI | GGGAC | 1 cut(s) | 221 |
| FatI | CATG | 2 cut(s) | 88, 97 |
| Fnu4HI | GCNGC | 3 cut(s) | 178, 188, 261 |
| FokI | GGATG | 2 cut(s) | 218, 238 |
| Fsp4HI | GCNGC | 3 cut(s) | 178, 188, 261 |
| GlaI | GCGC | 1 cut(s) | 63 |
| GluI | GCNGC | 3 cut(s) | 178, 188, 261 |
| HaeIII | GGCC | 2 cut(s) | 29, 80 |
| HapII | CCGG | 1 cut(s) | 160 |
| HgaI | GACGC | 3 cut(s) | 59, 179, 193 |
| HhaI | GCGC | 1 cut(s) | 64 |
| Hin1II | CATG | 2 cut(s) | 92, 101 |
| Hin6I | GCGC | 1 cut(s) | 62 |
| HinP1I | GCGC | 1 cut(s) | 62 |
| HinfI | GANTC | 1 cut(s) | 296 |
| HpaII | CCGG | 1 cut(s) | 160 |
| HphI | GGTGA | 1 cut(s) | 157 |
| Hpy188III | TCNNGA | 2 cut(s) | 194, 293 |
| HpyCH4III | ACNGT | 1 cut(s) | 58 |
| HpyCH4V | TGCA | 2 cut(s) | 23, 214 |
| HpyF3I | CTNAG | 1 cut(s) | 313 |
| Hsp92II | CATG | 2 cut(s) | 92, 101 |
| HspAI | GCGC | 1 cut(s) | 62 |
| Kzo9I | GATC | 2 cut(s) | 16, 289 |
| Lsp1109I | GCAGC | 3 cut(s) | 164, 199, 247 |
| MabI | ACCWGGT | 1 cut(s) | 38 |
| MalI | GATC | 2 cut(s) | 18, 291 |
| MbiI | CCGCTC | 1 cut(s) | 106 |
| MboI | GATC | 2 cut(s) | 16, 289 |
| MboII | GAAGA | 1 cut(s) | 43 |
| MlsI | TGGCCA | 1 cut(s) | 29 |
| MluNI | TGGCCA | 1 cut(s) | 29 |
| MlyI | GAGTC | 1 cut(s) | 305 |
| MnlI | CCTC | 4 cut(s) | 129, 141, 211, 290 |
| Mox20I | TGGCCA | 1 cut(s) | 29 |
| MscI | TGGCCA | 1 cut(s) | 29 |
| Msp20I | TGGCCA | 1 cut(s) | 29 |
| MspI | CCGG | 1 cut(s) | 160 |
| MspR9I | CCNGG | 4 cut(s) | 40, 203, 240, 257 |
| MvaI | CCWGG | 4 cut(s) | 40, 203, 240, 257 |
| MvnI | CGCG | 1 cut(s) | 64 |
| NcoI | CCATGG | 1 cut(s) | 88 |
| NdeII | GATC | 2 cut(s) | 16, 289 |
| NlaIII | CATG | 2 cut(s) | 92, 101 |
| NlaIV | GGNNCC | 2 cut(s) | 81, 164 |
| NmeAIII | GCCGAG | 1 cut(s) | 159 |
| PaqCI | CACCTGC | 1 cut(s) | 130 |
| PflFI | GACNNNGTC | 1 cut(s) | 275 |
| PinAI | ACCGGT | 1 cut(s) | 159 |
| PkrI | GCNGC | 3 cut(s) | 179, 189, 262 |
| Ple19I | CGATCG | 1 cut(s) | 292 |
| PleI | GAGTC | 1 cut(s) | 304 |
| PpsI | GAGTC | 1 cut(s) | 304 |
| Psp6I | CCWGG | 4 cut(s) | 38, 201, 238, 255 |
| PspGI | CCWGG | 4 cut(s) | 38, 201, 238, 255 |
| PspN4I | GGNNCC | 2 cut(s) | 81, 164 |
| PspPI | GGNCC | 1 cut(s) | 79 |
| PsyI | GACNNNGTC | 1 cut(s) | 275 |
| PvuI | CGATCG | 1 cut(s) | 292 |
| RsaI | GTAC | 1 cut(s) | 158 |
| RsaNI | GTAC | 1 cut(s) | 157 |
| SatI | GCNGC | 3 cut(s) | 178, 188, 261 |
| Sau3AI | GATC | 2 cut(s) | 16, 289 |
| Sau96I | GGNCC | 1 cut(s) | 79 |
| SchI | GAGTC | 1 cut(s) | 305 |
| ScrFI | CCNGG | 4 cut(s) | 40, 203, 240, 257 |
| SetI | ASST | 3 cut(s) | 41, 144, 179 |
| SexAI | ACCWGGT | 1 cut(s) | 38 |
| SsiI | CCGC | 1 cut(s) | 104 |
| StyD4I | CCNGG | 4 cut(s) | 38, 201, 238, 255 |
| StyI | CCWWGG | 1 cut(s) | 88 |
| TaaI | ACNGT | 1 cut(s) | 58 |
| TaqI | TCGA | 2 cut(s) | 288, 292 |
| TscAI | CASTG | 2 cut(s) | 30, 274 |
| TseI | GCWGC | 3 cut(s) | 177, 187, 260 |
| TspRI | CASTG | 2 cut(s) | 30, 274 |
| Tth111I | GACNNNGTC | 1 cut(s) | 275 |