ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 54 |
| AcuI | CTGAAG | 1 cut(s) | 342 |
| AfaI | GTAC | 1 cut(s) | 226 |
| AgsI | TTSAA | 2 cut(s) | 34, 292 |
| AjiI | CACGTC | 1 cut(s) | 103 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 92, 124 |
| AluBI | AGCT | 3 cut(s) | 77, 265, 298 |
| AluI | AGCT | 3 cut(s) | 77, 265, 298 |
| Alw21I | GWGCWC | 1 cut(s) | 411 |
| Alw26I | GTCTC | 1 cut(s) | 172 |
| AoxI | GGCC | 1 cut(s) | 54 |
| AsuC2I | CCSGG | 1 cut(s) | 58 |
| AsuHPI | GGTGA | 2 cut(s) | 338, 408 |
| Bbv12I | GWGCWC | 1 cut(s) | 411 |
| BccI | CCATC | 1 cut(s) | 86 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 33, 67 |
| BcnI | CCSGG | 1 cut(s) | 58 |
| BcoDI | GTCTC | 1 cut(s) | 172 |
| BfaI | CTAG | 2 cut(s) | 74, 140 |
| Bme1390I | CCNGG | 1 cut(s) | 58 |
| BmgBI | CACGTC | 1 cut(s) | 103 |
| BmiI | GGNNCC | 1 cut(s) | 110 |
| BmrFI | CCNGG | 1 cut(s) | 58 |
| BmsI | GCATC | 2 cut(s) | 354, 425 |
| Bpu10I | CCTNAGC | 1 cut(s) | 309 |
| BpuMI | CCSGG | 1 cut(s) | 58 |
| BsaBI | GATNNNNATC | 1 cut(s) | 118 |
| BsaJI | CCNNGG | 1 cut(s) | 269 |
| Bse8I | GATNNNNATC | 1 cut(s) | 118 |
| BseDI | CCNNGG | 1 cut(s) | 269 |
| BseGI | GGATG | 3 cut(s) | 199, 369, 440 |
| BseJI | GATNNNNATC | 1 cut(s) | 118 |
| BseMII | CTCAG | 3 cut(s) | 239, 275, 323 |
| BseX3I | CGGCCG | 1 cut(s) | 54 |
| Bsh1285I | CGRYCG | 1 cut(s) | 57 |
| BshFI | GGCC | 1 cut(s) | 56 |
| BsiEI | CGRYCG | 1 cut(s) | 57 |
| BsiHKAI | GWGCWC | 1 cut(s) | 411 |
| BsiSI | CCGG | 1 cut(s) | 57 |
| BsmAI | GTCTC | 1 cut(s) | 172 |
| BsnI | GGCC | 1 cut(s) | 56 |
| Bsp1286I | GDGCHC | 1 cut(s) | 411 |
| Bsp1407I | TGTACA | 1 cut(s) | 224 |
| Bsp143I | GATC | 3 cut(s) | 113, 136, 348 |
| BspANI | GGCC | 1 cut(s) | 56 |
| BspCNI | CTCAG | 3 cut(s) | 240, 274, 322 |
| BspLI | GGNNCC | 1 cut(s) | 110 |
| BsrGI | TGTACA | 1 cut(s) | 224 |
| BssECI | CCNNGG | 1 cut(s) | 269 |
| BssMI | GATC | 3 cut(s) | 113, 136, 348 |
| BssT1I | CCWWGG | 1 cut(s) | 269 |
| Bst6I | CTCTTC | 1 cut(s) | 361 |
| BstAUI | TGTACA | 1 cut(s) | 224 |
| BstDEI | CTNAG | 3 cut(s) | 248, 261, 309 |
| BstF5I | GGATG | 3 cut(s) | 199, 369, 440 |
| BstKTI | GATC | 3 cut(s) | 116, 139, 351 |
| BstMAI | GTCTC | 1 cut(s) | 172 |
| BstMBI | GATC | 3 cut(s) | 113, 136, 348 |
| BstMCI | CGRYCG | 1 cut(s) | 57 |
| BstSCI | CCNGG | 1 cut(s) | 56 |
| BstZI | CGGCCG | 1 cut(s) | 54 |
| BsuRI | GGCC | 1 cut(s) | 56 |
| BtrI | CACGTC | 1 cut(s) | 103 |
| BtsCI | GGATG | 3 cut(s) | 199, 369, 440 |
| Csp6I | GTAC | 1 cut(s) | 225 |
| CviAII | CATG | 1 cut(s) | 228 |
| CviJI | RGCY | 4 cut(s) | 56, 77, 265, 298 |
| CviKI_1 | RGCY | 4 cut(s) | 56, 77, 265, 298 |
| CviQI | GTAC | 1 cut(s) | 225 |
| DdeI | CTNAG | 3 cut(s) | 248, 261, 309 |
| DpnI | GATC | 3 cut(s) | 115, 138, 350 |
| DpnII | GATC | 3 cut(s) | 113, 136, 348 |
| EaeI | YGGCCR | 1 cut(s) | 54 |
| EagI | CGGCCG | 1 cut(s) | 54 |
| Eam1104I | CTCTTC | 1 cut(s) | 361 |
| EarI | CTCTTC | 1 cut(s) | 361 |
| EclXI | CGGCCG | 1 cut(s) | 54 |
| Eco130I | CCWWGG | 1 cut(s) | 269 |
| Eco52I | CGGCCG | 1 cut(s) | 54 |
| Eco57I | CTGAAG | 1 cut(s) | 342 |
| EcoT14I | CCWWGG | 1 cut(s) | 269 |
| ErhI | CCWWGG | 1 cut(s) | 269 |
| FaeI | CATG | 1 cut(s) | 231 |
| FaiI | YATR | 4 cut(s) | 80, 195, 206, 229 |
| FatI | CATG | 1 cut(s) | 227 |
| FokI | GGATG | 2 cut(s) | 186, 376 |
| FspBI | CTAG | 2 cut(s) | 74, 140 |
| HaeIII | GGCC | 1 cut(s) | 56 |
| HapII | CCGG | 1 cut(s) | 57 |
| Hin1II | CATG | 1 cut(s) | 231 |
| HinfI | GANTC | 1 cut(s) | 257 |
| HpaII | CCGG | 1 cut(s) | 57 |
| HphI | GGTGA | 2 cut(s) | 338, 408 |
| Hpy166II | GTNNAC | 2 cut(s) | 71, 170 |
| Hpy188I | TCNGA | 3 cut(s) | 113, 249, 381 |
| Hpy188III | TCNNGA | 3 cut(s) | 17, 140, 311 |
| Hpy8I | GTNNAC | 2 cut(s) | 71, 170 |
| HpyAV | CCTTC | 2 cut(s) | 310, 335 |
| HpyCH4IV | ACGT | 2 cut(s) | 102, 172 |
| HpyCH4V | TGCA | 2 cut(s) | 367, 443 |
| HpyF3I | CTNAG | 3 cut(s) | 248, 261, 309 |
| HpySE526I | ACGT | 2 cut(s) | 102, 172 |
| Hsp92II | CATG | 1 cut(s) | 231 |
| Kzo9I | GATC | 3 cut(s) | 113, 136, 348 |
| LmnI | GCTCC | 1 cut(s) | 406 |
| LpnPI | CCDG | 6 cut(s) | 2, 51, 70, 70, 296, 345 |
| LweI | GCATC | 2 cut(s) | 354, 425 |
| MaeI | CTAG | 2 cut(s) | 74, 140 |
| MaeII | ACGT | 2 cut(s) | 102, 172 |
| MaeIII | GTNAC | 1 cut(s) | 234 |
| MalI | GATC | 3 cut(s) | 115, 138, 350 |
| MboI | GATC | 3 cut(s) | 113, 136, 348 |
| MboII | GAAGA | 1 cut(s) | 348 |
| MhlI | GDGCHC | 1 cut(s) | 411 |
| MluCI | AATT | 3 cut(s) | 20, 34, 382 |
| MmeI | TCCRAC | 1 cut(s) | 155 |
| MnlI | CCTC | 5 cut(s) | 99, 117, 247, 313, 327 |
| MspI | CCGG | 1 cut(s) | 57 |
| MspR9I | CCNGG | 1 cut(s) | 58 |
| NciI | CCSGG | 1 cut(s) | 58 |
| NdeII | GATC | 3 cut(s) | 113, 136, 348 |
| NlaIII | CATG | 1 cut(s) | 231 |
| NlaIV | GGNNCC | 1 cut(s) | 110 |
| NmeAIII | GCCGAG | 1 cut(s) | 32 |
| PfeI | GAWTC | 1 cut(s) | 257 |
| PspN4I | GGNNCC | 1 cut(s) | 110 |
| RsaI | GTAC | 1 cut(s) | 226 |
| RsaNI | GTAC | 1 cut(s) | 225 |
| Sau3AI | GATC | 3 cut(s) | 113, 136, 348 |
| ScrFI | CCNGG | 1 cut(s) | 58 |
| SduI | GDGCHC | 1 cut(s) | 411 |
| SetI | ASST | 8 cut(s) | 79, 105, 110, 175, 267, 271, 300, 429 |
| SfaNI | GCATC | 2 cut(s) | 354, 425 |
| Sse9I | AATT | 3 cut(s) | 20, 34, 382 |
| SspMI | CTAG | 2 cut(s) | 74, 140 |
| StyD4I | CCNGG | 1 cut(s) | 56 |
| StyI | CCWWGG | 1 cut(s) | 269 |
| TaiI | ACGT | 2 cut(s) | 105, 175 |
| TaqI | TCGA | 2 cut(s) | 122, 389 |
| TasI | AATT | 3 cut(s) | 20, 34, 382 |
| TatI | WGTACW | 1 cut(s) | 224 |
| TfiI | GAWTC | 1 cut(s) | 257 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 164 |
| XbaI | TCTAGA | 1 cut(s) | 139 |
| XspI | CTAG | 2 cut(s) | 74, 140 |