ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 2168 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1228, 1556 |
| AccBSI | CCGCTC | 1 cut(s) | 3034 |
| AccII | CGCG | 2 cut(s) | 1212, 3016 |
| AccIII | TCCGGA | 1 cut(s) | 433 |
| AclWI | GGATC | 3 cut(s) | 1541, 1554, 2045 |
| AcoI | YGGCCR | 2 cut(s) | 1337, 2890 |
| AcsI | RAATTY | 5 cut(s) | 1392, 1467, 2350, 2371, 2440 |
| AcuI | CTGAAG | 4 cut(s) | 674, 1230, 2253, 2727 |
| AfaI | GTAC | 2 cut(s) | 515, 1362 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 766, 767, 1163, 1228, 1294, 1556 |
| AflIII | ACRYGT | 4 cut(s) | 129, 1357, 1411, 2522 |
| AgeI | ACCGGT | 1 cut(s) | 1723 |
| AjnI | CCWGG | 2 cut(s) | 112, 955 |
| AleI | CACNNNNGTG | 1 cut(s) | 2006 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 282, 314 |
| Alw21I | GWGCWC | 3 cut(s) | 330, 357, 2064 |
| Alw26I | GTCTC | 8 cut(s) | 268, 479, 890, 956, 1097, 1143, 1158, 2303 |
| AlwI | GGATC | 3 cut(s) | 1541, 1554, 2045 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1126 |
| Aor13HI | TCCGGA | 1 cut(s) | 433 |
| AoxI | GGCC | 7 cut(s) | 68, 1059, 1337, 1957, 2674, 2779, 2890 |
| ApeKI | GCWGC | 5 cut(s) | 1376, 1653, 1803, 2495, 2834 |
| ApoI | RAATTY | 5 cut(s) | 1392, 1467, 2350, 2371, 2440 |
| AsiGI | ACCGGT | 1 cut(s) | 1723 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1668 |
| AspLEI | GCGC | 3 cut(s) | 2866, 2963, 3018 |
| AspS9I | GGNCC | 2 cut(s) | 1258, 1957 |
| AsuHPI | GGTGA | 3 cut(s) | 283, 395, 1018 |
| AsuII | TTCGAA | 1 cut(s) | 2811 |
| AvaII | GGWCC | 1 cut(s) | 1258 |
| AxyI | CCTNAGG | 1 cut(s) | 72 |
| BamHI | GGATCC | 1 cut(s) | 1546 |
| BanI | GGYRCC | 1 cut(s) | 2168 |
| BanII | GRGCYC | 3 cut(s) | 330, 433, 2064 |
| Bbv12I | GWGCWC | 3 cut(s) | 330, 357, 2064 |
| BbvCI | CCTCAGC | 1 cut(s) | 302 |
| BbvI | GCAGC | 5 cut(s) | 1388, 1640, 1790, 2507, 2821 |
| BccI | CCATC | 4 cut(s) | 982, 1018, 2746, 2771 |
| BceAI | ACGGC | 2 cut(s) | 1034, 2905 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2285, 2319 |
| BciT130I | CCWGG | 2 cut(s) | 114, 957 |
| BciVI | GTATCC | 1 cut(s) | 861 |
| BclI | TGATCA | 3 cut(s) | 1000, 1482, 1885 |
| BcoDI | GTCTC | 8 cut(s) | 268, 479, 890, 956, 1097, 1143, 1158, 2303 |
| BfaI | CTAG | 4 cut(s) | 1716, 1922, 1974, 3065 |
| BfmI | CTRYAG | 5 cut(s) | 165, 1364, 1577, 2289, 2731 |
| BfuI | GTATCC | 1 cut(s) | 861 |
| BisI | GCNGC | 8 cut(s) | 182, 1374, 1377, 1654, 1804, 2496, 2835, 3035 |
| BlsI | GCNGC | 8 cut(s) | 183, 1375, 1378, 1655, 1805, 2497, 2836, 3036 |
| Bme1390I | CCNGG | 2 cut(s) | 114, 957 |
| Bme18I | GGWCC | 1 cut(s) | 1258 |
| BmgT120I | GGNCC | 2 cut(s) | 1258, 1957 |
| BmiI | GGNNCC | 7 cut(s) | 432, 939, 1548, 1767, 1958, 1993, 2170 |
| BmrFI | CCNGG | 2 cut(s) | 114, 957 |
| BmrI | ACTGGG | 2 cut(s) | 256, 2836 |
| BmsI | GCATC | 5 cut(s) | 1113, 1388, 1649, 2077, 2536 |
| BmuI | ACTGGG | 2 cut(s) | 256, 2836 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2549, 2581 |
| BpmI | CTGGAG | 4 cut(s) | 840, 1185, 1578, 2373 |
| Bpu10I | CCTNAGC | 2 cut(s) | 302, 2063 |
| Bpu14I | TTCGAA | 1 cut(s) | 2811 |
| BpuEI | CTTGAG | 2 cut(s) | 314, 819 |
| Bsa29I | ATCGAT | 1 cut(s) | 21 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2457 |
| BsaI | GGTCTC | 1 cut(s) | 1158 |
| BsaJI | CCNNGG | 6 cut(s) | 956, 1062, 1293, 1401, 2515, 2893 |
| BsaWI | WCCGGW | 2 cut(s) | 433, 1723 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 533, 563, 1242, 1272 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 766, 767, 1163, 1228, 1294, 1556 |
| Bse118I | RCCGGY | 4 cut(s) | 631, 871, 1723, 2171 |
| Bse1I | ACTGG | 6 cut(s) | 251, 521, 2125, 2768, 2824, 2831 |
| Bse21I | CCTNAGG | 1 cut(s) | 72 |
| Bse3DI | GCAATG | 3 cut(s) | 1382, 1663, 2928 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2457 |
| BseAI | TCCGGA | 1 cut(s) | 433 |
| BseBI | CCWGG | 2 cut(s) | 114, 957 |
| BseCI | ATCGAT | 1 cut(s) | 21 |
| BseDI | CCNNGG | 6 cut(s) | 956, 1062, 1293, 1401, 2515, 2893 |
| BseGI | GGATG | 6 cut(s) | 415, 442, 993, 1278, 2761, 2782 |
| BseJI | GATNNNNATC | 1 cut(s) | 2457 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 766, 767, 1163, 1228, 1294, 1556 |
| BseMI | GCAATG | 3 cut(s) | 1382, 1663, 2928 |
| BseMII | CTCAG | 6 cut(s) | 63, 316, 639, 1173, 2077, 2298 |
| BseNI | ACTGG | 6 cut(s) | 251, 521, 2125, 2768, 2824, 2831 |
| BseRI | GAGGAG | 5 cut(s) | 152, 1115, 1146, 1775, 2273 |
| BseXI | GCAGC | 5 cut(s) | 1388, 1640, 1790, 2507, 2821 |
| Bsh1236I | CGCG | 2 cut(s) | 1212, 3016 |
| BshFI | GGCC | 7 cut(s) | 70, 1061, 1339, 1959, 2676, 2781, 2892 |
| BshNI | GGYRCC | 1 cut(s) | 2168 |
| BshTI | ACCGGT | 1 cut(s) | 1723 |
| BshVI | ATCGAT | 1 cut(s) | 21 |
| BsiHKAI | GWGCWC | 3 cut(s) | 330, 357, 2064 |
| BsiSI | CCGG | 6 cut(s) | 434, 632, 872, 1336, 1724, 2172 |
| BslFI | GGGAC | 2 cut(s) | 1921, 2414 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 766, 767, 1163, 1228, 1294, 1556 |
| BsmAI | GTCTC | 8 cut(s) | 268, 479, 890, 956, 1097, 1143, 1158, 2303 |
| BsmFI | GGGAC | 2 cut(s) | 1921, 2414 |
| BsmI | GAATGC | 2 cut(s) | 700, 1594 |
| BsnI | GGCC | 7 cut(s) | 70, 1061, 1339, 1959, 2676, 2781, 2892 |
| Bso31I | GGTCTC | 1 cut(s) | 1158 |
| Bsp119I | TTCGAA | 1 cut(s) | 2811 |
| Bsp1286I | GDGCHC | 4 cut(s) | 330, 357, 433, 2064 |
| Bsp13I | TCCGGA | 1 cut(s) | 433 |
| BspANI | GGCC | 7 cut(s) | 70, 1061, 1339, 1959, 2676, 2781, 2892 |
| BspCNI | CTCAG | 6 cut(s) | 64, 315, 640, 1174, 2076, 2299 |
| BspDI | ATCGAT | 1 cut(s) | 21 |
| BspEI | TCCGGA | 1 cut(s) | 433 |
| BspFNI | CGCG | 2 cut(s) | 1212, 3016 |
| BspHI | TCATGA | 2 cut(s) | 1141, 1507 |
| BspLI | GGNNCC | 7 cut(s) | 432, 939, 1548, 1767, 1958, 1993, 2170 |
| BspMAI | CTGCAG | 2 cut(s) | 1581, 2293 |
| BspPI | GGATC | 3 cut(s) | 1541, 1554, 2045 |
| BspQI | GCTCTTC | 2 cut(s) | 223, 345 |
| BspT104I | TTCGAA | 1 cut(s) | 2811 |
| BspT107I | GGYRCC | 1 cut(s) | 2168 |
| BspTNI | GGTCTC | 1 cut(s) | 1158 |
| BsrBI | CCGCTC | 1 cut(s) | 3034 |
| BsrDI | GCAATG | 3 cut(s) | 1382, 1663, 2928 |
| BsrFI | RCCGGY | 4 cut(s) | 631, 871, 1723, 2171 |
| BsrI | ACTGG | 6 cut(s) | 251, 521, 2125, 2768, 2824, 2831 |
| BssAI | RCCGGY | 4 cut(s) | 631, 871, 1723, 2171 |
| BssECI | CCNNGG | 6 cut(s) | 956, 1062, 1293, 1401, 2515, 2893 |
| BssT1I | CCWWGG | 4 cut(s) | 1062, 1293, 1401, 2515 |
| Bst2UI | CCWGG | 2 cut(s) | 114, 957 |
| Bst6I | CTCTTC | 6 cut(s) | 223, 345, 1623, 1707, 2164, 2961 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 563 |
| BstBI | TTCGAA | 1 cut(s) | 2811 |
| BstC8I | GCNNGC | 8 cut(s) | 261, 308, 953, 1128, 1214, 1223, 2476, 2718 |
| BstDSI | CCRYGG | 1 cut(s) | 2893 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1292 |
| BstF5I | GGATG | 6 cut(s) | 415, 442, 993, 1278, 2761, 2782 |
| BstFNI | CGCG | 2 cut(s) | 1212, 3016 |
| BstHHI | GCGC | 3 cut(s) | 2866, 2963, 3018 |
| BstMAI | GTCTC | 8 cut(s) | 268, 479, 890, 956, 1097, 1143, 1158, 2303 |
| BstNI | CCWGG | 2 cut(s) | 114, 957 |
| BstNSI | RCATGY | 7 cut(s) | 133, 1361, 1415, 1873, 2225, 2347, 2397 |
| BstSCI | CCNGG | 2 cut(s) | 112, 955 |
| BstSFI | CTRYAG | 5 cut(s) | 165, 1364, 1577, 2289, 2731 |
| BstUI | CGCG | 2 cut(s) | 1212, 3016 |
| BstV1I | GCAGC | 5 cut(s) | 1388, 1640, 1790, 2507, 2821 |
| BstX2I | RGATCY | 1 cut(s) | 1546 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2986 |
| BstYI | RGATCY | 1 cut(s) | 1546 |
| Bsu15I | ATCGAT | 1 cut(s) | 21 |
| Bsu36I | CCTNAGG | 1 cut(s) | 72 |
| BsuI | GTATCC | 1 cut(s) | 861 |
| BsuRI | GGCC | 7 cut(s) | 70, 1061, 1339, 1959, 2676, 2781, 2892 |
| BsuTUI | ATCGAT | 1 cut(s) | 21 |
| BtgI | CCRYGG | 1 cut(s) | 2893 |
| BtgZI | GCGATG | 3 cut(s) | 612, 1821, 2948 |
| BtsCI | GGATG | 6 cut(s) | 415, 442, 993, 1278, 2761, 2782 |
| BtsIMutI | CAGTG | 6 cut(s) | 244, 511, 817, 1617, 1797, 1965 |
| Cac8I | GCNNGC | 8 cut(s) | 261, 308, 953, 1128, 1214, 1223, 2476, 2718 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1126 |
| CciI | TCATGA | 2 cut(s) | 1141, 1507 |
| CfoI | GCGC | 3 cut(s) | 2866, 2963, 3018 |
| Cfr10I | RCCGGY | 4 cut(s) | 631, 871, 1723, 2171 |
| Cfr13I | GGNCC | 2 cut(s) | 1258, 1957 |
| ClaI | ATCGAT | 1 cut(s) | 21 |
| CseI | GACGC | 1 cut(s) | 2188 |
| Csp6I | GTAC | 2 cut(s) | 514, 1361 |
| CspAI | ACCGGT | 1 cut(s) | 1723 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1186, 1221 |
| CviQI | GTAC | 2 cut(s) | 514, 1361 |
| DraI | TTTAAA | 1 cut(s) | 1861 |
| EaeI | YGGCCR | 2 cut(s) | 1337, 2890 |
| Eam1104I | CTCTTC | 6 cut(s) | 223, 345, 1623, 1707, 2164, 2961 |
| EarI | CTCTTC | 6 cut(s) | 223, 345, 1623, 1707, 2164, 2961 |
| Ecl136II | GAGCTC | 2 cut(s) | 328, 2062 |
| Eco130I | CCWWGG | 4 cut(s) | 1062, 1293, 1401, 2515 |
| Eco24I | GRGCYC | 3 cut(s) | 330, 433, 2064 |
| Eco31I | GGTCTC | 1 cut(s) | 1158 |
| Eco32I | GATATC | 2 cut(s) | 298, 2071 |
| Eco47I | GGWCC | 1 cut(s) | 1258 |
| Eco53kI | GAGCTC | 2 cut(s) | 328, 2062 |
| Eco57I | CTGAAG | 4 cut(s) | 674, 1230, 2253, 2727 |
| Eco81I | CCTNAGG | 1 cut(s) | 72 |
| EcoICRI | GAGCTC | 2 cut(s) | 328, 2062 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1292 |
| EcoRI | GAATTC | 1 cut(s) | 2350 |
| EcoRII | CCWGG | 2 cut(s) | 112, 955 |
| EcoRV | GATATC | 2 cut(s) | 298, 2071 |
| EcoT14I | CCWWGG | 4 cut(s) | 1062, 1293, 1401, 2515 |
| EcoT22I | ATGCAT | 3 cut(s) | 537, 2227, 2950 |
| EcoT38I | GRGCYC | 3 cut(s) | 330, 433, 2064 |
| ErhI | CCWWGG | 4 cut(s) | 1062, 1293, 1401, 2515 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3021, 3053 |
| FaqI | GGGAC | 2 cut(s) | 1921, 2414 |
| FauI | CCCGC | 1 cut(s) | 1898 |
| FauNDI | CATATG | 1 cut(s) | 2763 |
| FbaI | TGATCA | 3 cut(s) | 1000, 1482, 1885 |
| Fnu4HI | GCNGC | 8 cut(s) | 182, 1374, 1377, 1654, 1804, 2496, 2835, 3035 |
| FokI | GGATG | 6 cut(s) | 422, 449, 1000, 1265, 2768, 2789 |
| FriOI | GRGCYC | 3 cut(s) | 330, 433, 2064 |
| Fsp4HI | GCNGC | 8 cut(s) | 182, 1374, 1377, 1654, 1804, 2496, 2835, 3035 |
| FspBI | CTAG | 4 cut(s) | 1716, 1922, 1974, 3065 |
| GlaI | GCGC | 3 cut(s) | 2865, 2962, 3017 |
| GluI | GCNGC | 8 cut(s) | 182, 1374, 1377, 1654, 1804, 2496, 2835, 3035 |
| GsuI | CTGGAG | 4 cut(s) | 840, 1185, 1578, 2373 |
| HaeIII | GGCC | 7 cut(s) | 70, 1061, 1339, 1959, 2676, 2781, 2892 |
| HapII | CCGG | 6 cut(s) | 434, 632, 872, 1336, 1724, 2172 |
| HgaI | GACGC | 1 cut(s) | 2188 |
| HhaI | GCGC | 3 cut(s) | 2866, 2963, 3018 |
| Hin6I | GCGC | 3 cut(s) | 2864, 2961, 3016 |
| HinP1I | GCGC | 3 cut(s) | 2864, 2961, 3016 |
| HindIII | AAGCTT | 3 cut(s) | 452, 1031, 2680 |
| HpaII | CCGG | 6 cut(s) | 434, 632, 872, 1336, 1724, 2172 |
| HphI | GGTGA | 3 cut(s) | 283, 395, 1018 |
| Hpy166II | GTNNAC | 2 cut(s) | 514, 1503 |
| Hpy8I | GTNNAC | 2 cut(s) | 514, 1503 |
| Hpy99I | CGWCG | 1 cut(s) | 2038 |
| HpyAV | CCTTC | 5 cut(s) | 69, 1400, 1505, 1658, 2877 |
| HpyCH4IV | ACGT | 3 cut(s) | 920, 2522, 2803 |
| HpySE526I | ACGT | 3 cut(s) | 920, 2522, 2803 |
| HspAI | GCGC | 3 cut(s) | 2864, 2961, 3016 |
| Kpn2I | TCCGGA | 1 cut(s) | 433 |
| Ksp22I | TGATCA | 3 cut(s) | 1000, 1482, 1885 |
| LguI | GCTCTTC | 2 cut(s) | 223, 345 |
| LmnI | GCTCC | 4 cut(s) | 190, 436, 1997, 2702 |
| Lsp1109I | GCAGC | 5 cut(s) | 1388, 1640, 1790, 2507, 2821 |
| LweI | GCATC | 5 cut(s) | 1113, 1388, 1649, 2077, 2536 |
| MaeI | CTAG | 4 cut(s) | 1716, 1922, 1974, 3065 |
| MaeII | ACGT | 3 cut(s) | 920, 2522, 2803 |
| MbiI | CCGCTC | 1 cut(s) | 3034 |
| MfeI | CAATTG | 2 cut(s) | 966, 1937 |
| MflI | RGATCY | 1 cut(s) | 1546 |
| MhlI | GDGCHC | 4 cut(s) | 330, 357, 433, 2064 |
| MlyI | GAGTC | 5 cut(s) | 374, 489, 1310, 2414, 2984 |
| MmeI | TCCRAC | 9 cut(s) | 114, 168, 531, 1209, 1288, 1299, 1574, 2016, 2155 |
| Mph1103I | ATGCAT | 3 cut(s) | 537, 2227, 2950 |
| MroI | TCCGGA | 1 cut(s) | 433 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1668 |
| MseI | TTAA | 5 cut(s) | 606, 825, 1454, 1728, 1860 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1874, 2006, 2046, 2933 |
| MspA1I | CMGCKG | 1 cut(s) | 1225 |
| MspI | CCGG | 6 cut(s) | 434, 632, 872, 1336, 1724, 2172 |
| MspR9I | CCNGG | 2 cut(s) | 114, 957 |
| MunI | CAATTG | 2 cut(s) | 966, 1937 |
| Mva1269I | GAATGC | 2 cut(s) | 700, 1594 |
| MvaI | CCWGG | 2 cut(s) | 114, 957 |
| MvnI | CGCG | 2 cut(s) | 1212, 3016 |
| NdeI | CATATG | 1 cut(s) | 2763 |
| NlaIV | GGNNCC | 7 cut(s) | 432, 939, 1548, 1767, 1958, 1993, 2170 |
| NmeAIII | GCCGAG | 2 cut(s) | 520, 2003 |
| NmuCI | GTSAC | 4 cut(s) | 142, 383, 1673, 2339 |
| NsiI | ATGCAT | 3 cut(s) | 537, 2227, 2950 |
| NspI | RCATGY | 7 cut(s) | 133, 1361, 1415, 1873, 2225, 2347, 2397 |
| NspV | TTCGAA | 1 cut(s) | 2811 |
| OliI | CACNNNNGTG | 1 cut(s) | 2006 |
| PagI | TCATGA | 2 cut(s) | 1141, 1507 |
| PciI | ACATGT | 3 cut(s) | 129, 1357, 1411 |
| PciSI | GCTCTTC | 2 cut(s) | 223, 345 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 2800, 2999 |
| PctI | GAATGC | 2 cut(s) | 700, 1594 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1668 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1228, 1556 |
| PinAI | ACCGGT | 1 cut(s) | 1723 |
| PkrI | GCNGC | 8 cut(s) | 183, 1375, 1378, 1655, 1805, 2497, 2836, 3036 |
| PleI | GAGTC | 5 cut(s) | 373, 488, 1309, 2414, 2984 |
| PpsI | GAGTC | 5 cut(s) | 373, 488, 1309, 2414, 2984 |
| PscI | ACATGT | 3 cut(s) | 129, 1357, 1411 |
| Psp124BI | GAGCTC | 2 cut(s) | 330, 2064 |
| Psp6I | CCWGG | 2 cut(s) | 112, 955 |
| PspGI | CCWGG | 2 cut(s) | 112, 955 |
| PspN4I | GGNNCC | 7 cut(s) | 432, 939, 1548, 1767, 1958, 1993, 2170 |
| PspPI | GGNCC | 2 cut(s) | 1258, 1957 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3033, 3065 |
| PstI | CTGCAG | 2 cut(s) | 1581, 2293 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1126 |
| PsuI | RGATCY | 1 cut(s) | 1546 |
| PvuII | CAGCTG | 1 cut(s) | 1225 |
| RsaI | GTAC | 2 cut(s) | 515, 1362 |
| RsaNI | GTAC | 2 cut(s) | 514, 1361 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1874, 2006, 2046, 2933 |
| SacI | GAGCTC | 2 cut(s) | 330, 2064 |
| SapI | GCTCTTC | 2 cut(s) | 223, 345 |
| SaqAI | TTAA | 5 cut(s) | 606, 825, 1454, 1728, 1860 |
| SatI | GCNGC | 8 cut(s) | 182, 1374, 1377, 1654, 1804, 2496, 2835, 3035 |
| Sau96I | GGNCC | 2 cut(s) | 1258, 1957 |
| SchI | GAGTC | 5 cut(s) | 374, 489, 1310, 2414, 2984 |
| ScrFI | CCNGG | 2 cut(s) | 114, 957 |
| SduI | GDGCHC | 4 cut(s) | 330, 357, 433, 2064 |
| SfaNI | GCATC | 5 cut(s) | 1113, 1388, 1649, 2077, 2536 |
| SfcI | CTRYAG | 5 cut(s) | 165, 1364, 1577, 2289, 2731 |
| SfuI | TTCGAA | 1 cut(s) | 2811 |
| SinI | GGWCC | 1 cut(s) | 1258 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1874, 2006, 2046, 2933 |
| SmlI | CTYRAG | 2 cut(s) | 329, 834 |
| SmoI | CTYRAG | 2 cut(s) | 329, 834 |
| SspI | AATATT | 2 cut(s) | 28, 2641 |
| SspMI | CTAG | 4 cut(s) | 1716, 1922, 1974, 3065 |
| SstI | GAGCTC | 2 cut(s) | 330, 2064 |
| StyD4I | CCNGG | 2 cut(s) | 112, 955 |
| StyI | CCWWGG | 4 cut(s) | 1062, 1293, 1401, 2515 |
| TaiI | ACGT | 3 cut(s) | 923, 2525, 2806 |
| TatI | WGTACW | 2 cut(s) | 513, 1360 |
| TauI | GCSGC | 3 cut(s) | 184, 1376, 3037 |
| Tru1I | TTAA | 5 cut(s) | 606, 825, 1454, 1728, 1860 |
| Tru9I | TTAA | 5 cut(s) | 606, 825, 1454, 1728, 1860 |
| TscAI | CASTG | 6 cut(s) | 251, 511, 817, 1617, 1797, 1972 |
| TseFI | GTSAC | 4 cut(s) | 142, 383, 1673, 2339 |
| TseI | GCWGC | 5 cut(s) | 1376, 1653, 1803, 2495, 2834 |
| Tsp45I | GTSAC | 4 cut(s) | 142, 383, 1673, 2339 |
| TspGWI | ACGGA | 3 cut(s) | 1112, 2715, 2910 |
| TspRI | CASTG | 6 cut(s) | 251, 511, 817, 1617, 1797, 1972 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1228, 1556 |
| VpaK11BI | GGWCC | 1 cut(s) | 1258 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1292 |
| XapI | RAATTY | 5 cut(s) | 1392, 1467, 2350, 2371, 2440 |
| XceI | RCATGY | 7 cut(s) | 133, 1361, 1415, 1873, 2225, 2347, 2397 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 403 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1668 |
| XspI | CTAG | 4 cut(s) | 1716, 1922, 1974, 3065 |
| Zsp2I | ATGCAT | 3 cut(s) | 537, 2227, 2950 |