ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 339 |
| AccII | CGCG | 2 cut(s) | 330, 403 |
| AciI | CCGC | 4 cut(s) | 330, 396, 487, 688 |
| AclWI | GGATC | 2 cut(s) | 169, 441 |
| AcsI | RAATTY | 1 cut(s) | 234 |
| AcuI | CTGAAG | 1 cut(s) | 195 |
| AfaI | GTAC | 2 cut(s) | 619, 753 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 226, 428 |
| AgeI | ACCGGT | 2 cut(s) | 185, 498 |
| AgsI | TTSAA | 2 cut(s) | 173, 512 |
| AjiI | CACGTC | 1 cut(s) | 139 |
| AjnI | CCWGG | 3 cut(s) | 264, 594, 765 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 31 |
| AluBI | AGCT | 3 cut(s) | 260, 680, 706 |
| AluI | AGCT | 3 cut(s) | 260, 680, 706 |
| AlwI | GGATC | 2 cut(s) | 169, 441 |
| AoxI | GGCC | 2 cut(s) | 70, 583 |
| ApeKI | GCWGC | 2 cut(s) | 398, 703 |
| ApoI | RAATTY | 1 cut(s) | 234 |
| AsiGI | ACCGGT | 2 cut(s) | 185, 498 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 423 |
| AspLEI | GCGC | 5 cut(s) | 15, 219, 316, 330, 403 |
| AspS9I | GGNCC | 2 cut(s) | 522, 584 |
| AsuHPI | GGTGA | 1 cut(s) | 562 |
| AvaII | GGWCC | 1 cut(s) | 522 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 237, 269 |
| BbsI | GAAGAC | 2 cut(s) | 707, 750 |
| BbvI | GCAGC | 2 cut(s) | 410, 715 |
| BccI | CCATC | 4 cut(s) | 86, 152, 228, 481 |
| BceAI | ACGGC | 1 cut(s) | 301 |
| BciT130I | CCWGG | 3 cut(s) | 266, 596, 767 |
| BfaI | CTAG | 5 cut(s) | 165, 299, 621, 681, 693 |
| BfoI | RGCGCY | 1 cut(s) | 220 |
| BfuAI | ACCTGC | 1 cut(s) | 339 |
| BisI | GCNGC | 2 cut(s) | 399, 704 |
| BlsI | GCNGC | 2 cut(s) | 400, 705 |
| BmcAI | AGTACT | 1 cut(s) | 619 |
| Bme1390I | CCNGG | 3 cut(s) | 266, 596, 767 |
| Bme18I | GGWCC | 1 cut(s) | 522 |
| BmgBI | CACGTC | 1 cut(s) | 139 |
| BmgT120I | GGNCC | 2 cut(s) | 522, 584 |
| BmiI | GGNNCC | 4 cut(s) | 420, 503, 524, 566 |
| BmrFI | CCNGG | 3 cut(s) | 266, 596, 767 |
| BmsI | GCATC | 3 cut(s) | 161, 259, 383 |
| BpiI | GAAGAC | 2 cut(s) | 707, 750 |
| BpmI | CTGGAG | 3 cut(s) | 87, 578, 788 |
| BsaWI | WCCGGW | 2 cut(s) | 185, 498 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 226, 428 |
| Bse118I | RCCGGY | 2 cut(s) | 185, 498 |
| Bse1I | ACTGG | 2 cut(s) | 524, 583 |
| BseBI | CCWGG | 3 cut(s) | 266, 596, 767 |
| BseGI | GGATG | 3 cut(s) | 106, 199, 274 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 226, 428 |
| BseMII | CTCAG | 1 cut(s) | 230 |
| BseNI | ACTGG | 2 cut(s) | 524, 583 |
| BseXI | GCAGC | 2 cut(s) | 410, 715 |
| BsgI | GTGCAG | 2 cut(s) | 75, 354 |
| Bsh1236I | CGCG | 2 cut(s) | 330, 403 |
| BshFI | GGCC | 2 cut(s) | 72, 585 |
| BshTI | ACCGGT | 2 cut(s) | 185, 498 |
| BsiSI | CCGG | 2 cut(s) | 186, 499 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 226, 428 |
| BsmI | GAATGC | 2 cut(s) | 33, 168 |
| BsnI | GGCC | 2 cut(s) | 72, 585 |
| Bsp143I | GATC | 3 cut(s) | 161, 295, 433 |
| BspACI | CCGC | 4 cut(s) | 330, 396, 487, 688 |
| BspANI | GGCC | 2 cut(s) | 72, 585 |
| BspCNI | CTCAG | 1 cut(s) | 231 |
| BspFNI | CGCG | 2 cut(s) | 330, 403 |
| BspHI | TCATGA | 1 cut(s) | 529 |
| BspLI | GGNNCC | 4 cut(s) | 420, 503, 524, 566 |
| BspMI | ACCTGC | 1 cut(s) | 339 |
| BspPI | GGATC | 2 cut(s) | 169, 441 |
| BsrFI | RCCGGY | 2 cut(s) | 185, 498 |
| BsrI | ACTGG | 2 cut(s) | 524, 583 |
| BssAI | RCCGGY | 2 cut(s) | 185, 498 |
| BssMI | GATC | 3 cut(s) | 161, 295, 433 |
| Bst2UI | CCWGG | 3 cut(s) | 266, 596, 767 |
| Bst4CI | ACNGT | 2 cut(s) | 359, 756 |
| Bst6I | CTCTTC | 3 cut(s) | 86, 528, 537 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 10 |
| BstC8I | GCNNGC | 1 cut(s) | 690 |
| BstDEI | CTNAG | 1 cut(s) | 239 |
| BstF5I | GGATG | 3 cut(s) | 106, 199, 274 |
| BstFNI | CGCG | 2 cut(s) | 330, 403 |
| BstH2I | RGCGCY | 1 cut(s) | 220 |
| BstHHI | GCGC | 5 cut(s) | 15, 219, 316, 330, 403 |
| BstKTI | GATC | 3 cut(s) | 164, 298, 436 |
| BstMBI | GATC | 3 cut(s) | 161, 295, 433 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 10 |
| BstNI | CCWGG | 3 cut(s) | 266, 596, 767 |
| BstNSI | RCATGY | 1 cut(s) | 794 |
| BstSCI | CCNGG | 3 cut(s) | 264, 594, 765 |
| BstUI | CGCG | 2 cut(s) | 330, 403 |
| BstV1I | GCAGC | 2 cut(s) | 410, 715 |
| BstV2I | GAAGAC | 2 cut(s) | 707, 750 |
| BstX2I | RGATCY | 1 cut(s) | 161 |
| BstYI | RGATCY | 1 cut(s) | 161 |
| BsuRI | GGCC | 2 cut(s) | 72, 585 |
| BtrI | CACGTC | 1 cut(s) | 139 |
| BtsCI | GGATG | 3 cut(s) | 106, 199, 274 |
| BtsI | GCAGTG | 1 cut(s) | 676 |
| BtsIMutI | CAGTG | 1 cut(s) | 676 |
| BveI | ACCTGC | 1 cut(s) | 339 |
| Cac8I | GCNNGC | 1 cut(s) | 690 |
| CciI | TCATGA | 1 cut(s) | 529 |
| CfoI | GCGC | 5 cut(s) | 15, 219, 316, 330, 403 |
| Cfr10I | RCCGGY | 2 cut(s) | 185, 498 |
| Cfr13I | GGNCC | 2 cut(s) | 522, 584 |
| CseI | GACGC | 1 cut(s) | 392 |
| Csp6I | GTAC | 2 cut(s) | 618, 752 |
| CspAI | ACCGGT | 2 cut(s) | 185, 498 |
| CviAII | CATG | 4 cut(s) | 428, 530, 569, 791 |
| CviQI | GTAC | 2 cut(s) | 618, 752 |
| DdeI | CTNAG | 1 cut(s) | 239 |
| DpnI | GATC | 3 cut(s) | 163, 297, 435 |
| DpnII | GATC | 3 cut(s) | 161, 295, 433 |
| Eam1104I | CTCTTC | 3 cut(s) | 86, 528, 537 |
| EarI | CTCTTC | 3 cut(s) | 86, 528, 537 |
| Eco147I | AGGCCT | 1 cut(s) | 72 |
| Eco47I | GGWCC | 1 cut(s) | 522 |
| Eco57I | CTGAAG | 1 cut(s) | 195 |
| EcoRI | GAATTC | 1 cut(s) | 234 |
| EcoRII | CCWGG | 3 cut(s) | 264, 594, 765 |
| FaeI | CATG | 4 cut(s) | 431, 533, 572, 794 |
| FatI | CATG | 4 cut(s) | 427, 529, 568, 790 |
| FauI | CCCGC | 3 cut(s) | 403, 494, 681 |
| Fnu4HI | GCNGC | 2 cut(s) | 399, 704 |
| FokI | GGATG | 3 cut(s) | 113, 186, 281 |
| Fsp4HI | GCNGC | 2 cut(s) | 399, 704 |
| FspBI | CTAG | 5 cut(s) | 165, 299, 621, 681, 693 |
| GlaI | GCGC | 5 cut(s) | 14, 218, 315, 329, 402 |
| GluI | GCNGC | 2 cut(s) | 399, 704 |
| GsuI | CTGGAG | 3 cut(s) | 87, 578, 788 |
| HaeII | RGCGCY | 1 cut(s) | 220 |
| HaeIII | GGCC | 2 cut(s) | 72, 585 |
| HapII | CCGG | 2 cut(s) | 186, 499 |
| HgaI | GACGC | 1 cut(s) | 392 |
| HhaI | GCGC | 5 cut(s) | 15, 219, 316, 330, 403 |
| Hin1II | CATG | 4 cut(s) | 431, 533, 572, 794 |
| Hin6I | GCGC | 5 cut(s) | 13, 217, 314, 328, 401 |
| HinP1I | GCGC | 5 cut(s) | 13, 217, 314, 328, 401 |
| HincII | GTYRAC | 1 cut(s) | 123 |
| HindII | GTYRAC | 1 cut(s) | 123 |
| HindIII | AAGCTT | 1 cut(s) | 258 |
| HpaII | CCGG | 2 cut(s) | 186, 499 |
| HphI | GGTGA | 1 cut(s) | 562 |
| Hpy166II | GTNNAC | 3 cut(s) | 123, 321, 776 |
| Hpy188I | TCNGA | 5 cut(s) | 157, 214, 240, 385, 633 |
| Hpy188III | TCNNGA | 5 cut(s) | 66, 85, 98, 530, 737 |
| Hpy8I | GTNNAC | 3 cut(s) | 123, 321, 776 |
| HpyAV | CCTTC | 3 cut(s) | 239, 536, 547 |
| HpyCH4III | ACNGT | 2 cut(s) | 359, 756 |
| HpyCH4IV | ACGT | 2 cut(s) | 138, 725 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 56, 77, 335, 374 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 10 |
| HpyF3I | CTNAG | 1 cut(s) | 239 |
| HpySE526I | ACGT | 2 cut(s) | 138, 725 |
| Hsp92II | CATG | 4 cut(s) | 431, 533, 572, 794 |
| HspAI | GCGC | 5 cut(s) | 13, 217, 314, 328, 401 |
| Kzo9I | GATC | 3 cut(s) | 161, 295, 433 |
| LmnI | GCTCC | 3 cut(s) | 564, 597, 769 |
| Lsp1109I | GCAGC | 2 cut(s) | 410, 715 |
| LweI | GCATC | 3 cut(s) | 161, 259, 383 |
| MaeI | CTAG | 5 cut(s) | 165, 299, 621, 681, 693 |
| MaeII | ACGT | 2 cut(s) | 138, 725 |
| MaeIII | GTNAC | 2 cut(s) | 410, 515 |
| MalI | GATC | 3 cut(s) | 163, 297, 435 |
| MboI | GATC | 3 cut(s) | 161, 295, 433 |
| MboII | GAAGA | 6 cut(s) | 73, 545, 554, 616, 707, 750 |
| MflI | RGATCY | 1 cut(s) | 161 |
| MluCI | AATT | 3 cut(s) | 234, 609, 780 |
| MmeI | TCCRAC | 2 cut(s) | 227, 542 |
| MroXI | GAANNNNTTC | 1 cut(s) | 423 |
| MseI | TTAA | 1 cut(s) | 33 |
| MspI | CCGG | 2 cut(s) | 186, 499 |
| MspR9I | CCNGG | 3 cut(s) | 266, 596, 767 |
| Mva1269I | GAATGC | 2 cut(s) | 33, 168 |
| MvaI | CCWGG | 3 cut(s) | 266, 596, 767 |
| MvnI | CGCG | 2 cut(s) | 330, 403 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 10 |
| NdeII | GATC | 3 cut(s) | 161, 295, 433 |
| NlaIII | CATG | 4 cut(s) | 431, 533, 572, 794 |
| NlaIV | GGNNCC | 4 cut(s) | 420, 503, 524, 566 |
| NmuCI | GTSAC | 1 cut(s) | 410 |
| NspI | RCATGY | 1 cut(s) | 794 |
| PagI | TCATGA | 1 cut(s) | 529 |
| PceI | AGGCCT | 1 cut(s) | 72 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 769 |
| PctI | GAATGC | 2 cut(s) | 33, 168 |
| PdmI | GAANNNNTTC | 1 cut(s) | 423 |
| PfoI | TCCNGGA | 1 cut(s) | 264 |
| PinAI | ACCGGT | 2 cut(s) | 185, 498 |
| PkrI | GCNGC | 2 cut(s) | 400, 705 |
| Psp6I | CCWGG | 3 cut(s) | 264, 594, 765 |
| PspGI | CCWGG | 3 cut(s) | 264, 594, 765 |
| PspN4I | GGNNCC | 4 cut(s) | 420, 503, 524, 566 |
| PspPI | GGNCC | 2 cut(s) | 522, 584 |
| PsuI | RGATCY | 1 cut(s) | 161 |
| RsaI | GTAC | 2 cut(s) | 619, 753 |
| RsaNI | GTAC | 2 cut(s) | 618, 752 |
| SaqAI | TTAA | 1 cut(s) | 33 |
| SatI | GCNGC | 2 cut(s) | 399, 704 |
| Sau3AI | GATC | 3 cut(s) | 161, 295, 433 |
| Sau96I | GGNCC | 2 cut(s) | 522, 584 |
| ScaI | AGTACT | 1 cut(s) | 619 |
| ScrFI | CCNGG | 3 cut(s) | 266, 596, 767 |
| SfaNI | GCATC | 3 cut(s) | 161, 259, 383 |
| SinI | GGWCC | 1 cut(s) | 522 |
| Sse9I | AATT | 3 cut(s) | 234, 609, 780 |
| SseBI | AGGCCT | 1 cut(s) | 72 |
| SsiI | CCGC | 4 cut(s) | 330, 396, 487, 688 |
| SspMI | CTAG | 5 cut(s) | 165, 299, 621, 681, 693 |
| StuI | AGGCCT | 1 cut(s) | 72 |
| StyD4I | CCNGG | 3 cut(s) | 264, 594, 765 |
| TaaI | ACNGT | 2 cut(s) | 359, 756 |
| TaiI | ACGT | 2 cut(s) | 141, 728 |
| TaqI | TCGA | 1 cut(s) | 223 |
| TasI | AATT | 3 cut(s) | 234, 609, 780 |
| TatI | WGTACW | 2 cut(s) | 617, 751 |
| Tru1I | TTAA | 1 cut(s) | 33 |
| Tru9I | TTAA | 1 cut(s) | 33 |
| TscAI | CASTG | 1 cut(s) | 676 |
| TseFI | GTSAC | 1 cut(s) | 410 |
| TseI | GCWGC | 2 cut(s) | 398, 703 |
| Tsp45I | GTSAC | 1 cut(s) | 410 |
| TspDTI | ATGAA | 3 cut(s) | 416, 518, 546 |
| TspGWI | ACGGA | 1 cut(s) | 494 |
| TspRI | CASTG | 1 cut(s) | 676 |
| VpaK11BI | GGWCC | 1 cut(s) | 522 |
| XapI | RAATTY | 1 cut(s) | 234 |
| XceI | RCATGY | 1 cut(s) | 794 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 575 |
| XmnI | GAANNNNTTC | 1 cut(s) | 423 |
| XspI | CTAG | 5 cut(s) | 165, 299, 621, 681, 693 |
| ZrmI | AGTACT | 1 cut(s) | 619 |