Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 536 |
| AciI | CCGC | 1 cut(s) | 547 |
| AclWI | GGATC | 3 cut(s) | 44, 78, 282 |
| AcuI | CTGAAG | 2 cut(s) | 201, 546 |
| AfaI | GTAC | 1 cut(s) | 150 |
| AgsI | TTSAA | 2 cut(s) | 67, 457 |
| AjiI | CACGTC | 1 cut(s) | 532 |
| AjnI | CCWGG | 1 cut(s) | 393 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 292, 324 |
| AluBI | AGCT | 4 cut(s) | 359, 452, 505, 553 |
| AluI | AGCT | 4 cut(s) | 359, 452, 505, 553 |
| AlwI | GGATC | 3 cut(s) | 44, 78, 282 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 260 |
| ApeKI | GCWGC | 2 cut(s) | 155, 550 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 504 |
| AsuHPI | GGTGA | 1 cut(s) | 361 |
| BbsI | GAAGAC | 1 cut(s) | 534 |
| BbvI | GCAGC | 2 cut(s) | 142, 562 |
| BccI | CCATC | 1 cut(s) | 550 |
| BciT130I | CCWGG | 1 cut(s) | 395 |
| BfaI | CTAG | 2 cut(s) | 366, 420 |
| BisI | GCNGC | 3 cut(s) | 156, 548, 551 |
| BlsI | GCNGC | 3 cut(s) | 157, 549, 552 |
| Bme1390I | CCNGG | 1 cut(s) | 395 |
| BmgBI | CACGTC | 1 cut(s) | 532 |
| BmiI | GGNNCC | 1 cut(s) | 562 |
| BmrFI | CCNGG | 1 cut(s) | 395 |
| BmsI | GCATC | 3 cut(s) | 274, 459, 465 |
| BpiI | GAAGAC | 1 cut(s) | 534 |
| BsaAI | YACGTR | 1 cut(s) | 152 |
| Bse1I | ACTGG | 1 cut(s) | 378 |
| BseBI | CCWGG | 1 cut(s) | 395 |
| BseGI | GGATG | 2 cut(s) | 16, 376 |
| BseNI | ACTGG | 1 cut(s) | 378 |
| BseXI | GCAGC | 2 cut(s) | 142, 562 |
| BsiWI | CGTACG | 1 cut(s) | 148 |
| BslFI | GGGAC | 1 cut(s) | 265 |
| BsmFI | GGGAC | 1 cut(s) | 265 |
| Bsp143I | GATC | 5 cut(s) | 36, 70, 246, 274, 408 |
| BspACI | CCGC | 1 cut(s) | 547 |
| BspLI | GGNNCC | 1 cut(s) | 562 |
| BspPI | GGATC | 3 cut(s) | 44, 78, 282 |
| BspQI | GCTCTTC | 1 cut(s) | 495 |
| BsrI | ACTGG | 1 cut(s) | 378 |
| BssMI | GATC | 5 cut(s) | 36, 70, 246, 274, 408 |
| Bst2UI | CCWGG | 1 cut(s) | 395 |
| Bst4CI | ACNGT | 1 cut(s) | 256 |
| Bst6I | CTCTTC | 1 cut(s) | 495 |
| BstBAI | YACGTR | 1 cut(s) | 152 |
| BstDEI | CTNAG | 1 cut(s) | 17 |
| BstF5I | GGATG | 2 cut(s) | 16, 376 |
| BstKTI | GATC | 5 cut(s) | 39, 73, 249, 277, 411 |
| BstMBI | GATC | 5 cut(s) | 36, 70, 246, 274, 408 |
| BstNI | CCWGG | 1 cut(s) | 395 |
| BstSCI | CCNGG | 1 cut(s) | 393 |
| BstV1I | GCAGC | 2 cut(s) | 142, 562 |
| BstV2I | GAAGAC | 1 cut(s) | 534 |
| BstX2I | RGATCY | 3 cut(s) | 36, 70, 274 |
| BstYI | RGATCY | 3 cut(s) | 36, 70, 274 |
| BtrI | CACGTC | 1 cut(s) | 532 |
| BtsCI | GGATG | 2 cut(s) | 16, 376 |
| BtsIMutI | CAGTG | 2 cut(s) | 261, 351 |
| CaiI | CAGNNNCTG | 1 cut(s) | 260 |
| CsiI | ACCWGGT | 1 cut(s) | 393 |
| Csp6I | GTAC | 1 cut(s) | 149 |
| CviAII | CATG | 1 cut(s) | 173 |
| CviJI | RGCY | 6 cut(s) | 62, 333, 359, 452, 505, 553 |
| CviKI_1 | RGCY | 6 cut(s) | 62, 333, 359, 452, 505, 553 |
| CviQI | GTAC | 1 cut(s) | 149 |
| DdeI | CTNAG | 1 cut(s) | 17 |
| DpnI | GATC | 5 cut(s) | 38, 72, 248, 276, 410 |
| DpnII | GATC | 5 cut(s) | 36, 70, 246, 274, 408 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 536 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 536 |
| Eam1104I | CTCTTC | 1 cut(s) | 495 |
| EarI | CTCTTC | 1 cut(s) | 495 |
| Eco57I | CTGAAG | 2 cut(s) | 201, 546 |
| EcoRII | CCWGG | 1 cut(s) | 393 |
| FaeI | CATG | 1 cut(s) | 176 |
| FaiI | YATR | 8 cut(s) | 8, 174, 231, 270, 272, 330, 417, 583 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 492, 524 |
| FaqI | GGGAC | 1 cut(s) | 265 |
| FatI | CATG | 1 cut(s) | 172 |
| FauNDI | CATATG | 1 cut(s) | 270 |
| Fnu4HI | GCNGC | 3 cut(s) | 156, 548, 551 |
| FokI | GGATG | 2 cut(s) | 23, 383 |
| Fsp4HI | GCNGC | 3 cut(s) | 156, 548, 551 |
| FspBI | CTAG | 2 cut(s) | 366, 420 |
| GluI | GCNGC | 3 cut(s) | 156, 548, 551 |
| Hin1II | CATG | 1 cut(s) | 176 |
| HphI | GGTGA | 1 cut(s) | 361 |
| Hpy188I | TCNGA | 1 cut(s) | 181 |
| Hpy188III | TCNNGA | 3 cut(s) | 250, 509, 541 |
| HpyAV | CCTTC | 1 cut(s) | 61 |
| HpyCH4III | ACNGT | 1 cut(s) | 256 |
| HpyCH4IV | ACGT | 2 cut(s) | 151, 531 |
| HpyCH4V | TGCA | 1 cut(s) | 472 |
| HpyF3I | CTNAG | 1 cut(s) | 17 |
| HpySE526I | ACGT | 2 cut(s) | 151, 531 |
| Hsp92II | CATG | 1 cut(s) | 176 |
| Kzo9I | GATC | 5 cut(s) | 36, 70, 246, 274, 408 |
| LguI | GCTCTTC | 1 cut(s) | 495 |
| LpnPI | CCDG | 6 cut(s) | 189, 224, 246, 380, 391, 407 |
| Lsp1109I | GCAGC | 2 cut(s) | 142, 562 |
| LweI | GCATC | 3 cut(s) | 274, 459, 465 |
| MabI | ACCWGGT | 1 cut(s) | 393 |
| MaeI | CTAG | 2 cut(s) | 366, 420 |
| MaeII | ACGT | 2 cut(s) | 151, 531 |
| MaeIII | GTNAC | 2 cut(s) | 373, 397 |
| MalI | GATC | 5 cut(s) | 38, 72, 248, 276, 410 |
| MboI | GATC | 5 cut(s) | 36, 70, 246, 274, 408 |
| MboII | GAAGA | 3 cut(s) | 126, 512, 539 |
| MflI | RGATCY | 3 cut(s) | 36, 70, 274 |
| MluCI | AATT | 2 cut(s) | 25, 428 |
| MmeI | TCCRAC | 2 cut(s) | 277, 290 |
| MnlI | CCTC | 4 cut(s) | 26, 102, 315, 348 |
| MroXI | GAANNNNTTC | 1 cut(s) | 504 |
| MseI | TTAA | 2 cut(s) | 141, 521 |
| MspA1I | CMGCKG | 1 cut(s) | 553 |
| MspR9I | CCNGG | 1 cut(s) | 395 |
| MvaI | CCWGG | 1 cut(s) | 395 |
| NdeI | CATATG | 1 cut(s) | 270 |
| NdeII | GATC | 5 cut(s) | 36, 70, 246, 274, 408 |
| NlaIII | CATG | 1 cut(s) | 176 |
| NlaIV | GGNNCC | 1 cut(s) | 562 |
| PciSI | GCTCTTC | 1 cut(s) | 495 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 537 |
| PdmI | GAANNNNTTC | 1 cut(s) | 504 |
| Pfl23II | CGTACG | 1 cut(s) | 148 |
| PflFI | GACNNNGTC | 1 cut(s) | 256 |
| PkrI | GCNGC | 3 cut(s) | 157, 549, 552 |
| Ppu21I | YACGTR | 1 cut(s) | 152 |
| Psp6I | CCWGG | 1 cut(s) | 393 |
| PspGI | CCWGG | 1 cut(s) | 393 |
| PspLI | CGTACG | 1 cut(s) | 148 |
| PspN4I | GGNNCC | 1 cut(s) | 562 |
| PstNI | CAGNNNCTG | 1 cut(s) | 260 |
| PsuI | RGATCY | 3 cut(s) | 36, 70, 274 |
| PsyI | GACNNNGTC | 1 cut(s) | 256 |
| PvuII | CAGCTG | 1 cut(s) | 553 |
| RsaI | GTAC | 1 cut(s) | 150 |
| RsaNI | GTAC | 1 cut(s) | 149 |
| SapI | GCTCTTC | 1 cut(s) | 495 |
| SaqAI | TTAA | 2 cut(s) | 141, 521 |
| SatI | GCNGC | 3 cut(s) | 156, 548, 551 |
| Sau3AI | GATC | 5 cut(s) | 36, 70, 246, 274, 408 |
| ScrFI | CCNGG | 1 cut(s) | 395 |
| SexAI | ACCWGGT | 1 cut(s) | 393 |
| SfaNI | GCATC | 3 cut(s) | 274, 459, 465 |
| Sse9I | AATT | 2 cut(s) | 25, 428 |
| SsiI | CCGC | 1 cut(s) | 547 |
| SspMI | CTAG | 2 cut(s) | 366, 420 |
| StyD4I | CCNGG | 1 cut(s) | 393 |
| TaaI | ACNGT | 1 cut(s) | 256 |
| TaiI | ACGT | 2 cut(s) | 154, 534 |
| TaqI | TCGA | 2 cut(s) | 88, 540 |
| TasI | AATT | 2 cut(s) | 25, 428 |
| TauI | GCSGC | 1 cut(s) | 550 |
| Tru1I | TTAA | 2 cut(s) | 141, 521 |
| Tru9I | TTAA | 2 cut(s) | 141, 521 |
| TscAI | CASTG | 2 cut(s) | 261, 351 |
| TseI | GCWGC | 2 cut(s) | 155, 550 |
| TspRI | CASTG | 2 cut(s) | 261, 351 |
| Tth111I | GACNNNGTC | 1 cut(s) | 256 |
| XmnI | GAANNNNTTC | 1 cut(s) | 504 |
| XspI | CTAG | 2 cut(s) | 366, 420 |