Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 3 cut(s) | 57, 388, 392 |
| AjnI | CCWGG | 2 cut(s) | 295, 338 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 170, 202 |
| Alw26I | GTCTC | 2 cut(s) | 107, 307 |
| AoxI | GGCC | 2 cut(s) | 89, 208 |
| AspA2I | CCTAGG | 1 cut(s) | 211 |
| AsuHPI | GGTGA | 1 cut(s) | 257 |
| AvrII | CCTAGG | 1 cut(s) | 211 |
| BaeGI | GKGCMC | 1 cut(s) | 160 |
| BanII | GRGCYC | 1 cut(s) | 64 |
| BccI | CCATC | 3 cut(s) | 188, 241, 386 |
| BceAI | ACGGC | 1 cut(s) | 289 |
| BciT130I | CCWGG | 2 cut(s) | 297, 340 |
| BcoDI | GTCTC | 2 cut(s) | 107, 307 |
| BfaI | CTAG | 3 cut(s) | 57, 161, 212 |
| BlnI | CCTAGG | 1 cut(s) | 211 |
| Bme1390I | CCNGG | 2 cut(s) | 297, 340 |
| BmrFI | CCNGG | 2 cut(s) | 297, 340 |
| BmsI | GCATC | 1 cut(s) | 265 |
| BpmI | CTGGAG | 1 cut(s) | 225 |
| BpuEI | CTTGAG | 1 cut(s) | 37 |
| BsaJI | CCNNGG | 3 cut(s) | 211, 295, 387 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 170, 200 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 57, 388, 392 |
| Bse3DI | GCAATG | 1 cut(s) | 49 |
| BseBI | CCWGG | 2 cut(s) | 297, 340 |
| BseDI | CCNNGG | 3 cut(s) | 211, 295, 387 |
| BseGI | GGATG | 3 cut(s) | 252, 280, 397 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 57, 388, 392 |
| BseMI | GCAATG | 1 cut(s) | 49 |
| BseMII | CTCAG | 1 cut(s) | 95 |
| BseSI | GKGCMC | 1 cut(s) | 160 |
| BshFI | GGCC | 2 cut(s) | 91, 210 |
| BslFI | GGGAC | 1 cut(s) | 265 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 57, 388, 392 |
| BsmAI | GTCTC | 2 cut(s) | 107, 307 |
| BsmFI | GGGAC | 1 cut(s) | 265 |
| BsnI | GGCC | 2 cut(s) | 91, 210 |
| Bsp1286I | GDGCHC | 2 cut(s) | 64, 160 |
| BspANI | GGCC | 2 cut(s) | 91, 210 |
| BspCNI | CTCAG | 1 cut(s) | 94 |
| BsrDI | GCAATG | 1 cut(s) | 49 |
| BssECI | CCNNGG | 3 cut(s) | 211, 295, 387 |
| BssT1I | CCWWGG | 2 cut(s) | 211, 387 |
| Bst2UI | CCWGG | 2 cut(s) | 297, 340 |
| Bst4CI | ACNGT | 1 cut(s) | 346 |
| BstC8I | GCNNGC | 1 cut(s) | 302 |
| BstDEI | CTNAG | 1 cut(s) | 81 |
| BstF5I | GGATG | 3 cut(s) | 252, 280, 397 |
| BstMAI | GTCTC | 2 cut(s) | 107, 307 |
| BstNI | CCWGG | 2 cut(s) | 297, 340 |
| BstNSI | RCATGY | 1 cut(s) | 304 |
| BstSCI | CCNGG | 2 cut(s) | 295, 338 |
| BstSLI | GKGCMC | 1 cut(s) | 160 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 346 |
| BsuRI | GGCC | 2 cut(s) | 91, 210 |
| BtsCI | GGATG | 3 cut(s) | 252, 280, 397 |
| BtsIMutI | CAGTG | 1 cut(s) | 196 |
| Cac8I | GCNNGC | 1 cut(s) | 302 |
| CviAII | CATG | 1 cut(s) | 301 |
| CviJI | RGCY | 8 cut(s) | 62, 91, 137, 182, 210, 217, 294, 333 |
| CviKI_1 | RGCY | 8 cut(s) | 62, 91, 137, 182, 210, 217, 294, 333 |
| DdeI | CTNAG | 1 cut(s) | 81 |
| Eco130I | CCWWGG | 2 cut(s) | 211, 387 |
| Eco147I | AGGCCT | 1 cut(s) | 210 |
| Eco24I | GRGCYC | 1 cut(s) | 64 |
| EcoRII | CCWGG | 2 cut(s) | 295, 338 |
| EcoT14I | CCWWGG | 2 cut(s) | 211, 387 |
| EcoT38I | GRGCYC | 1 cut(s) | 64 |
| ErhI | CCWWGG | 2 cut(s) | 211, 387 |
| FaeI | CATG | 1 cut(s) | 304 |
| FaiI | YATR | 9 cut(s) | 38, 40, 109, 242, 270, 272, 302, 330, 336 |
| FaqI | GGGAC | 1 cut(s) | 265 |
| FatI | CATG | 1 cut(s) | 300 |
| FauNDI | CATATG | 2 cut(s) | 38, 270 |
| FokI | GGATG | 3 cut(s) | 259, 287, 404 |
| FriOI | GRGCYC | 1 cut(s) | 64 |
| FspBI | CTAG | 3 cut(s) | 57, 161, 212 |
| GsuI | CTGGAG | 1 cut(s) | 225 |
| HaeIII | GGCC | 2 cut(s) | 91, 210 |
| Hin1II | CATG | 1 cut(s) | 304 |
| HinfI | GANTC | 2 cut(s) | 85, 378 |
| HphI | GGTGA | 1 cut(s) | 257 |
| Hpy166II | GTNNAC | 1 cut(s) | 172 |
| Hpy188I | TCNGA | 3 cut(s) | 66, 84, 178 |
| Hpy188III | TCNNGA | 3 cut(s) | 16, 204, 223 |
| Hpy8I | GTNNAC | 1 cut(s) | 172 |
| HpyCH4III | ACNGT | 1 cut(s) | 346 |
| HpyCH4IV | ACGT | 2 cut(s) | 231, 257 |
| HpyCH4V | TGCA | 3 cut(s) | 30, 42, 278 |
| HpyF3I | CTNAG | 1 cut(s) | 81 |
| HpySE526I | ACGT | 2 cut(s) | 231, 257 |
| Hsp92II | CATG | 1 cut(s) | 304 |
| LpnPI | CCDG | 8 cut(s) | 139, 189, 208, 282, 306, 309, 325, 352 |
| LweI | GCATC | 1 cut(s) | 265 |
| MaeI | CTAG | 3 cut(s) | 57, 161, 212 |
| MaeII | ACGT | 2 cut(s) | 231, 257 |
| MhlI | GDGCHC | 2 cut(s) | 64, 160 |
| MluCI | AATT | 1 cut(s) | 25 |
| MnlI | CCTC | 5 cut(s) | 26, 102, 172, 200, 393 |
| MseI | TTAA | 1 cut(s) | 409 |
| MslI | CAYNNNNRTG | 1 cut(s) | 273 |
| MspR9I | CCNGG | 2 cut(s) | 297, 340 |
| MvaI | CCWGG | 2 cut(s) | 297, 340 |
| NdeI | CATATG | 2 cut(s) | 38, 270 |
| NlaIII | CATG | 1 cut(s) | 304 |
| NspI | RCATGY | 1 cut(s) | 304 |
| PaeI | GCATGC | 1 cut(s) | 304 |
| PceI | AGGCCT | 1 cut(s) | 210 |
| PfeI | GAWTC | 2 cut(s) | 85, 378 |
| PflFI | GACNNNGTC | 1 cut(s) | 256 |
| Psp6I | CCWGG | 2 cut(s) | 295, 338 |
| PspGI | CCWGG | 2 cut(s) | 295, 338 |
| PsyI | GACNNNGTC | 1 cut(s) | 256 |
| RseI | CAYNNNNRTG | 1 cut(s) | 273 |
| SaqAI | TTAA | 1 cut(s) | 409 |
| ScrFI | CCNGG | 2 cut(s) | 297, 340 |
| SduI | GDGCHC | 2 cut(s) | 64, 160 |
| SetI | ASST | 4 cut(s) | 234, 260, 325, 362 |
| SfaNI | GCATC | 1 cut(s) | 265 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 273 |
| SmlI | CTYRAG | 1 cut(s) | 16 |
| SmoI | CTYRAG | 1 cut(s) | 16 |
| SphI | GCATGC | 1 cut(s) | 304 |
| Sse9I | AATT | 1 cut(s) | 25 |
| SseBI | AGGCCT | 1 cut(s) | 210 |
| SspMI | CTAG | 3 cut(s) | 57, 161, 212 |
| StuI | AGGCCT | 1 cut(s) | 210 |
| StyD4I | CCNGG | 2 cut(s) | 295, 338 |
| StyI | CCWWGG | 2 cut(s) | 211, 387 |
| TaaI | ACNGT | 1 cut(s) | 346 |
| TaiI | ACGT | 2 cut(s) | 234, 260 |
| TasI | AATT | 1 cut(s) | 25 |
| TfiI | GAWTC | 2 cut(s) | 85, 378 |
| Tru1I | TTAA | 1 cut(s) | 409 |
| Tru9I | TTAA | 1 cut(s) | 409 |
| TscAI | CASTG | 1 cut(s) | 196 |
| TspRI | CASTG | 1 cut(s) | 196 |
| Tth111I | GACNNNGTC | 1 cut(s) | 256 |
| XceI | RCATGY | 1 cut(s) | 304 |
| XmaJI | CCTAGG | 1 cut(s) | 211 |
| XspI | CTAG | 3 cut(s) | 57, 161, 212 |