ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 5 |
| AccII | CGCG | 1 cut(s) | 454 |
| AclWI | GGATC | 2 cut(s) | 79, 102 |
| AcsI | RAATTY | 1 cut(s) | 270 |
| AfaI | GTAC | 1 cut(s) | 122 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 89, 130, 147, 315 |
| AflIII | ACRYGT | 1 cut(s) | 452 |
| AgsI | TTSAA | 1 cut(s) | 256 |
| AjnI | CCWGG | 1 cut(s) | 574 |
| AluBI | AGCT | 2 cut(s) | 506, 545 |
| AluI | AGCT | 2 cut(s) | 506, 545 |
| AlwI | GGATC | 2 cut(s) | 79, 102 |
| AoxI | GGCC | 2 cut(s) | 306, 578 |
| ApeKI | GCWGC | 3 cut(s) | 265, 428, 503 |
| ApoI | RAATTY | 1 cut(s) | 270 |
| AspLEI | GCGC | 1 cut(s) | 6 |
| AspS9I | GGNCC | 1 cut(s) | 578 |
| AxyI | CCTNAGG | 1 cut(s) | 480 |
| BbvI | GCAGC | 3 cut(s) | 277, 415, 515 |
| BccI | CCATC | 3 cut(s) | 233, 379, 578 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 254, 288 |
| BciT130I | CCWGG | 1 cut(s) | 576 |
| BclI | TGATCA | 1 cut(s) | 439 |
| BfaI | CTAG | 4 cut(s) | 56, 63, 113, 147 |
| BfmI | CTRYAG | 1 cut(s) | 429 |
| BisI | GCNGC | 3 cut(s) | 266, 429, 504 |
| BlsI | GCNGC | 3 cut(s) | 267, 430, 505 |
| Bme1390I | CCNGG | 1 cut(s) | 576 |
| BmgT120I | GGNCC | 1 cut(s) | 578 |
| BmrFI | CCNGG | 1 cut(s) | 576 |
| BsaJI | CCNNGG | 2 cut(s) | 88, 575 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 556, 586 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 89, 130, 147, 315 |
| Bse21I | CCTNAGG | 1 cut(s) | 480 |
| BseBI | CCWGG | 1 cut(s) | 576 |
| BseDI | CCNNGG | 2 cut(s) | 88, 575 |
| BseGI | GGATG | 2 cut(s) | 382, 390 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 89, 130, 147, 315 |
| BseMII | CTCAG | 1 cut(s) | 483 |
| BseRI | GAGGAG | 1 cut(s) | 36 |
| BseXI | GCAGC | 3 cut(s) | 277, 415, 515 |
| BseYI | CCCAGC | 1 cut(s) | 222 |
| BsgI | GTGCAG | 1 cut(s) | 284 |
| Bsh1236I | CGCG | 1 cut(s) | 454 |
| BshFI | GGCC | 2 cut(s) | 308, 580 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 89, 130, 147, 315 |
| BsmI | GAATGC | 1 cut(s) | 505 |
| BsnI | GGCC | 2 cut(s) | 308, 580 |
| Bsp143I | GATC | 3 cut(s) | 84, 94, 439 |
| Bsp19I | CCATGG | 1 cut(s) | 88 |
| BspANI | GGCC | 2 cut(s) | 308, 580 |
| BspCNI | CTCAG | 1 cut(s) | 484 |
| BspFNI | CGCG | 1 cut(s) | 454 |
| BspMAI | CTGCAG | 1 cut(s) | 433 |
| BspPI | GGATC | 2 cut(s) | 79, 102 |
| BssECI | CCNNGG | 2 cut(s) | 88, 575 |
| BssMI | GATC | 3 cut(s) | 84, 94, 439 |
| BssT1I | CCWWGG | 1 cut(s) | 88 |
| Bst2UI | CCWGG | 1 cut(s) | 576 |
| BstDEI | CTNAG | 2 cut(s) | 480, 492 |
| BstDSI | CCRYGG | 1 cut(s) | 88 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 313 |
| BstF5I | GGATG | 2 cut(s) | 382, 390 |
| BstFNI | CGCG | 1 cut(s) | 454 |
| BstHHI | GCGC | 1 cut(s) | 6 |
| BstKTI | GATC | 3 cut(s) | 87, 97, 442 |
| BstMBI | GATC | 3 cut(s) | 84, 94, 439 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 157, 512 |
| BstNI | CCWGG | 1 cut(s) | 576 |
| BstSCI | CCNGG | 1 cut(s) | 574 |
| BstSFI | CTRYAG | 1 cut(s) | 429 |
| BstUI | CGCG | 1 cut(s) | 454 |
| BstV1I | GCAGC | 3 cut(s) | 277, 415, 515 |
| Bsu36I | CCTNAGG | 1 cut(s) | 480 |
| BsuRI | GGCC | 2 cut(s) | 308, 580 |
| BtgI | CCRYGG | 1 cut(s) | 88 |
| BtsCI | GGATG | 2 cut(s) | 382, 390 |
| CfoI | GCGC | 1 cut(s) | 6 |
| Cfr13I | GGNCC | 1 cut(s) | 578 |
| CseI | GACGC | 2 cut(s) | 18, 193 |
| Csp6I | GTAC | 1 cut(s) | 121 |
| CviAII | CATG | 3 cut(s) | 39, 89, 443 |
| CviJI | RGCY | 9 cut(s) | 43, 62, 130, 222, 308, 428, 506, 545, 580 |
| CviKI_1 | RGCY | 9 cut(s) | 43, 62, 130, 222, 308, 428, 506, 545, 580 |
| CviQI | GTAC | 1 cut(s) | 121 |
| DdeI | CTNAG | 2 cut(s) | 480, 492 |
| DpnI | GATC | 3 cut(s) | 86, 96, 441 |
| DpnII | GATC | 3 cut(s) | 84, 94, 439 |
| Eco130I | CCWWGG | 1 cut(s) | 88 |
| Eco147I | AGGCCT | 1 cut(s) | 308 |
| Eco81I | CCTNAGG | 1 cut(s) | 480 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 313 |
| EcoRII | CCWGG | 1 cut(s) | 574 |
| EcoT14I | CCWWGG | 1 cut(s) | 88 |
| ErhI | CCWWGG | 1 cut(s) | 88 |
| FaeI | CATG | 3 cut(s) | 42, 92, 446 |
| FatI | CATG | 3 cut(s) | 38, 88, 442 |
| FbaI | TGATCA | 1 cut(s) | 439 |
| Fnu4HI | GCNGC | 3 cut(s) | 266, 429, 504 |
| FokI | GGATG | 2 cut(s) | 389, 397 |
| Fsp4HI | GCNGC | 3 cut(s) | 266, 429, 504 |
| FspBI | CTAG | 4 cut(s) | 56, 63, 113, 147 |
| FspI | TGCGCA | 1 cut(s) | 5 |
| GlaI | GCGC | 1 cut(s) | 5 |
| GluI | GCNGC | 3 cut(s) | 266, 429, 504 |
| GsaI | CCCAGC | 1 cut(s) | 226 |
| HaeIII | GGCC | 2 cut(s) | 308, 580 |
| HgaI | GACGC | 2 cut(s) | 18, 193 |
| HhaI | GCGC | 1 cut(s) | 6 |
| Hin1II | CATG | 3 cut(s) | 42, 92, 446 |
| Hin6I | GCGC | 1 cut(s) | 4 |
| HinP1I | GCGC | 1 cut(s) | 4 |
| HincII | GTYRAC | 2 cut(s) | 33, 466 |
| HindII | GTYRAC | 2 cut(s) | 33, 466 |
| HindIII | AAGCTT | 1 cut(s) | 543 |
| HinfI | GANTC | 1 cut(s) | 353 |
| Hpy166II | GTNNAC | 3 cut(s) | 33, 121, 466 |
| Hpy188I | TCNGA | 3 cut(s) | 84, 238, 555 |
| Hpy188III | TCNNGA | 2 cut(s) | 56, 491 |
| Hpy8I | GTNNAC | 3 cut(s) | 33, 121, 466 |
| HpyAV | CCTTC | 3 cut(s) | 120, 298, 603 |
| HpyCH4IV | ACGT | 1 cut(s) | 229 |
| HpyCH4V | TGCA | 5 cut(s) | 265, 290, 337, 431, 503 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 157, 512 |
| HpyF3I | CTNAG | 2 cut(s) | 480, 492 |
| HpySE526I | ACGT | 1 cut(s) | 229 |
| Hsp92II | CATG | 3 cut(s) | 42, 92, 446 |
| HspAI | GCGC | 1 cut(s) | 4 |
| Ksp22I | TGATCA | 1 cut(s) | 439 |
| Kzo9I | GATC | 3 cut(s) | 84, 94, 439 |
| Lsp1109I | GCAGC | 3 cut(s) | 277, 415, 515 |
| MaeI | CTAG | 4 cut(s) | 56, 63, 113, 147 |
| MaeII | ACGT | 1 cut(s) | 229 |
| MaeIII | GTNAC | 2 cut(s) | 275, 484 |
| MalI | GATC | 3 cut(s) | 86, 96, 441 |
| MboI | GATC | 3 cut(s) | 84, 94, 439 |
| MluCI | AATT | 4 cut(s) | 142, 154, 270, 471 |
| MluI | ACGCGT | 1 cut(s) | 452 |
| MnlI | CCTC | 5 cut(s) | 14, 52, 199, 211, 319 |
| MseI | TTAA | 1 cut(s) | 324 |
| MslI | CAYNNNNRTG | 1 cut(s) | 453 |
| MspR9I | CCNGG | 1 cut(s) | 576 |
| Mva1269I | GAATGC | 1 cut(s) | 505 |
| MvaI | CCWGG | 1 cut(s) | 576 |
| MvnI | CGCG | 1 cut(s) | 454 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 157, 512 |
| NcoI | CCATGG | 1 cut(s) | 88 |
| NdeII | GATC | 3 cut(s) | 84, 94, 439 |
| NlaIII | CATG | 3 cut(s) | 42, 92, 446 |
| NmuCI | GTSAC | 1 cut(s) | 484 |
| NsbI | TGCGCA | 1 cut(s) | 5 |
| PceI | AGGCCT | 1 cut(s) | 308 |
| PctI | GAATGC | 1 cut(s) | 505 |
| PfeI | GAWTC | 1 cut(s) | 353 |
| PkrI | GCNGC | 3 cut(s) | 267, 430, 505 |
| Psp6I | CCWGG | 1 cut(s) | 574 |
| PspFI | CCCAGC | 1 cut(s) | 222 |
| PspGI | CCWGG | 1 cut(s) | 574 |
| PspPI | GGNCC | 1 cut(s) | 578 |
| PstI | CTGCAG | 1 cut(s) | 433 |
| RsaI | GTAC | 1 cut(s) | 122 |
| RsaNI | GTAC | 1 cut(s) | 121 |
| RseI | CAYNNNNRTG | 1 cut(s) | 453 |
| SaqAI | TTAA | 1 cut(s) | 324 |
| SatI | GCNGC | 3 cut(s) | 266, 429, 504 |
| Sau3AI | GATC | 3 cut(s) | 84, 94, 439 |
| Sau96I | GGNCC | 1 cut(s) | 578 |
| ScrFI | CCNGG | 1 cut(s) | 576 |
| SetI | ASST | 8 cut(s) | 14, 210, 232, 471, 481, 486, 508, 547 |
| SfcI | CTRYAG | 1 cut(s) | 429 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 453 |
| Sse9I | AATT | 4 cut(s) | 142, 154, 270, 471 |
| SseBI | AGGCCT | 1 cut(s) | 308 |
| SspMI | CTAG | 4 cut(s) | 56, 63, 113, 147 |
| StuI | AGGCCT | 1 cut(s) | 308 |
| StyD4I | CCNGG | 1 cut(s) | 574 |
| StyI | CCWWGG | 1 cut(s) | 88 |
| TaiI | ACGT | 1 cut(s) | 232 |
| TaqI | TCGA | 1 cut(s) | 166 |
| TasI | AATT | 4 cut(s) | 142, 154, 270, 471 |
| TfiI | GAWTC | 1 cut(s) | 353 |
| Tru1I | TTAA | 1 cut(s) | 324 |
| Tru9I | TTAA | 1 cut(s) | 324 |
| TseFI | GTSAC | 1 cut(s) | 484 |
| TseI | GCWGC | 3 cut(s) | 265, 428, 503 |
| Tsp45I | GTSAC | 1 cut(s) | 484 |
| TspDTI | ATGAA | 2 cut(s) | 27, 512 |
| TspGWI | ACGGA | 1 cut(s) | 389 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 313 |
| XapI | RAATTY | 1 cut(s) | 270 |
| XbaI | TCTAGA | 1 cut(s) | 55 |
| XspI | CTAG | 4 cut(s) | 56, 63, 113, 147 |