ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 518 |
| Acc36I | ACCTGC | 1 cut(s) | 4019 |
| Acc65I | GGTACC | 1 cut(s) | 2605 |
| AccB1I | GGYRCC | 4 cut(s) | 815, 1623, 2212, 2605 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 2430, 2627, 3887 |
| AccI | GTMKAC | 3 cut(s) | 667, 3277, 4086 |
| AccII | CGCG | 1 cut(s) | 4050 |
| AciI | CCGC | 8 cut(s) | 485, 1088, 1612, 1943, 3930, 3933, 3936, 3939 |
| AclI | AACGTT | 1 cut(s) | 1859 |
| AclWI | GGATC | 4 cut(s) | 163, 682, 2549, 3099 |
| AcoI | YGGCCR | 2 cut(s) | 2291, 4072 |
| AcsI | RAATTY | 9 cut(s) | 435, 617, 763, 770, 776, 1108, 1615, 2227, 2343 |
| AcuI | CTGAAG | 2 cut(s) | 2076, 3987 |
| AfaI | GTAC | 9 cut(s) | 944, 1222, 1648, 1743, 2266, 2607, 3015, 3711, 4094 |
| AfeI | AGCGCT | 2 cut(s) | 1359, 1530 |
| AflII | CTTAAG | 1 cut(s) | 3818 |
| AflIII | ACRYGT | 2 cut(s) | 662, 4089 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 4082 |
| AhlI | ACTAGT | 1 cut(s) | 2539 |
| AjnI | CCWGG | 6 cut(s) | 670, 947, 1305, 1669, 2795, 3112 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1758, 1790 |
| AleI | CACNNNNGTG | 1 cut(s) | 3234 |
| Alw21I | GWGCWC | 2 cut(s) | 2374, 2423 |
| Alw26I | GTCTC | 9 cut(s) | 1597, 1638, 1819, 2174, 2530, 3042, 3443, 3510, 3530 |
| AlwI | GGATC | 4 cut(s) | 163, 682, 2549, 3099 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 4006 |
| Ama87I | CYCGRG | 1 cut(s) | 2373 |
| Aor51HI | AGCGCT | 2 cut(s) | 1359, 1530 |
| AoxI | GGCC | 9 cut(s) | 225, 464, 1374, 1569, 2291, 2798, 3844, 4065, 4072 |
| ApeKI | GCWGC | 7 cut(s) | 1130, 1133, 1142, 1196, 1364, 2090, 4045 |
| ApoI | RAATTY | 9 cut(s) | 435, 617, 763, 770, 776, 1108, 1615, 2227, 2343 |
| AseI | ATTAAT | 1 cut(s) | 338 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 272, 861 |
| Asp718I | GGTACC | 1 cut(s) | 2605 |
| AspA2I | CCTAGG | 1 cut(s) | 1349 |
| AspLEI | GCGC | 3 cut(s) | 1360, 1531, 4050 |
| AspS9I | GGNCC | 8 cut(s) | 1177, 1375, 1666, 2019, 2051, 2618, 3845, 3960 |
| AsuC2I | CCSGG | 1 cut(s) | 157 |
| AsuHPI | GGTGA | 7 cut(s) | 2830, 3248, 3437, 3491, 3500, 3779, 3953 |
| AsuII | TTCGAA | 2 cut(s) | 1813, 1848 |
| AvaI | CYCGRG | 1 cut(s) | 2373 |
| AvaII | GGWCC | 6 cut(s) | 1177, 1666, 2019, 2051, 2618, 3960 |
| AvrII | CCTAGG | 1 cut(s) | 1349 |
| BaeGI | GKGCMC | 1 cut(s) | 1628 |
| BalI | TGGCCA | 1 cut(s) | 2293 |
| BanI | GGYRCC | 4 cut(s) | 815, 1623, 2212, 2605 |
| BanII | GRGCYC | 1 cut(s) | 2240 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3126, 3158 |
| BbsI | GAAGAC | 1 cut(s) | 51 |
| Bbv12I | GWGCWC | 2 cut(s) | 2374, 2423 |
| BbvI | GCAGC | 7 cut(s) | 1117, 1120, 1129, 1183, 1351, 2102, 4057 |
| BceAI | ACGGC | 3 cut(s) | 1934, 2363, 3968 |
| BciT130I | CCWGG | 6 cut(s) | 672, 949, 1307, 1671, 2797, 3114 |
| BciVI | GTATCC | 2 cut(s) | 1217, 3196 |
| BclI | TGATCA | 2 cut(s) | 2770, 3238 |
| BcnI | CCSGG | 1 cut(s) | 157 |
| BcoDI | GTCTC | 9 cut(s) | 1597, 1638, 1819, 2174, 2530, 3042, 3443, 3510, 3530 |
| BcuI | ACTAGT | 1 cut(s) | 2539 |
| BfoI | RGCGCY | 2 cut(s) | 1361, 1532 |
| BfrI | CTTAAG | 1 cut(s) | 3818 |
| BfuAI | ACCTGC | 1 cut(s) | 4019 |
| BfuI | GTATCC | 2 cut(s) | 1217, 3196 |
| BglII | AGATCT | 1 cut(s) | 2360 |
| BlnI | CCTAGG | 1 cut(s) | 1349 |
| BlpI | GCTNAGC | 1 cut(s) | 1938 |
| Bme1390I | CCNGG | 7 cut(s) | 157, 672, 949, 1307, 1671, 2797, 3114 |
| Bme18I | GGWCC | 6 cut(s) | 1177, 1666, 2019, 2051, 2618, 3960 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 4082 |
| BmeT110I | CYCGRG | 1 cut(s) | 2373 |
| BmgT120I | GGNCC | 8 cut(s) | 1177, 1375, 1666, 2019, 2051, 2618, 3845, 3960 |
| BmrFI | CCNGG | 7 cut(s) | 157, 672, 949, 1307, 1671, 2797, 3114 |
| BmrI | ACTGGG | 1 cut(s) | 2440 |
| BmsI | GCATC | 3 cut(s) | 1411, 1599, 2710 |
| BmuI | ACTGGG | 1 cut(s) | 2440 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1755 |
| BpiI | GAAGAC | 1 cut(s) | 51 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1770, 1802 |
| BpmI | CTGGAG | 2 cut(s) | 931, 2779 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1938 |
| Bpu14I | TTCGAA | 2 cut(s) | 1813, 1848 |
| BpuEI | CTTGAG | 1 cut(s) | 1843 |
| BpuMI | CCSGG | 1 cut(s) | 157 |
| Bsa29I | ATCGAT | 2 cut(s) | 167, 2694 |
| Bse118I | RCCGGY | 1 cut(s) | 3914 |
| Bse1I | ACTGG | 4 cut(s) | 1152, 2216, 2435, 2735 |
| Bse3DI | GCAATG | 2 cut(s) | 1143, 1838 |
| BseBI | CCWGG | 6 cut(s) | 672, 949, 1307, 1671, 2797, 3114 |
| BseCI | ATCGAT | 2 cut(s) | 167, 2694 |
| BseMI | GCAATG | 2 cut(s) | 1143, 1838 |
| BseMII | CTCAG | 4 cut(s) | 1172, 1632, 2259, 2456 |
| BseNI | ACTGG | 4 cut(s) | 1152, 2216, 2435, 2735 |
| BseRI | GAGGAG | 4 cut(s) | 1083, 2318, 2899, 3486 |
| BseSI | GKGCMC | 1 cut(s) | 1628 |
| BseX3I | CGGCCG | 1 cut(s) | 4072 |
| BseXI | GCAGC | 7 cut(s) | 1117, 1120, 1129, 1183, 1351, 2102, 4057 |
| BseYI | CCCAGC | 2 cut(s) | 2496, 2658 |
| BsgI | GTGCAG | 3 cut(s) | 1128, 1234, 2109 |
| Bsh1236I | CGCG | 1 cut(s) | 4050 |
| Bsh1285I | CGRYCG | 2 cut(s) | 167, 4075 |
| BshFI | GGCC | 9 cut(s) | 227, 466, 1376, 1571, 2293, 2800, 3846, 4067, 4074 |
| BshNI | GGYRCC | 4 cut(s) | 815, 1623, 2212, 2605 |
| BshVI | ATCGAT | 2 cut(s) | 167, 2694 |
| BsiEI | CGRYCG | 2 cut(s) | 167, 4075 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2374, 2423 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2373 |
| BsiSI | CCGG | 4 cut(s) | 157, 3915, 4064, 4071 |
| BsiWI | CGTACG | 1 cut(s) | 3709 |
| BslFI | GGGAC | 3 cut(s) | 1652, 2064, 2134 |
| BsmAI | GTCTC | 9 cut(s) | 1597, 1638, 1819, 2174, 2530, 3042, 3443, 3510, 3530 |
| BsmBI | CGTCTC | 2 cut(s) | 1819, 2174 |
| BsmFI | GGGAC | 3 cut(s) | 1652, 2064, 2134 |
| BsnI | GGCC | 9 cut(s) | 227, 466, 1376, 1571, 2293, 2800, 3846, 4067, 4074 |
| BsoBI | CYCGRG | 1 cut(s) | 2373 |
| Bsp119I | TTCGAA | 2 cut(s) | 1813, 1848 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1628, 2240, 2374, 2423 |
| Bsp1407I | TGTACA | 1 cut(s) | 4092 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1938 |
| BspACI | CCGC | 8 cut(s) | 485, 1088, 1612, 1943, 3930, 3933, 3936, 3939 |
| BspANI | GGCC | 9 cut(s) | 227, 466, 1376, 1571, 2293, 2800, 3846, 4067, 4074 |
| BspCNI | CTCAG | 4 cut(s) | 1171, 1633, 2260, 2457 |
| BspDI | ATCGAT | 2 cut(s) | 167, 2694 |
| BspFNI | CGCG | 1 cut(s) | 4050 |
| BspMI | ACCTGC | 1 cut(s) | 4019 |
| BspPI | GGATC | 4 cut(s) | 163, 682, 2549, 3099 |
| BspQI | GCTCTTC | 1 cut(s) | 1392 |
| BspT104I | TTCGAA | 2 cut(s) | 1813, 1848 |
| BspT107I | GGYRCC | 4 cut(s) | 815, 1623, 2212, 2605 |
| BspTI | CTTAAG | 1 cut(s) | 3818 |
| BsrDI | GCAATG | 2 cut(s) | 1143, 1838 |
| BsrFI | RCCGGY | 1 cut(s) | 3914 |
| BsrGI | TGTACA | 1 cut(s) | 4092 |
| BsrI | ACTGG | 4 cut(s) | 1152, 2216, 2435, 2735 |
| BssAI | RCCGGY | 1 cut(s) | 3914 |
| BssNAI | GTATAC | 1 cut(s) | 668 |
| BssT1I | CCWWGG | 6 cut(s) | 449, 1349, 2022, 2910, 3232, 3841 |
| Bst1107I | GTATAC | 1 cut(s) | 668 |
| Bst2UI | CCWGG | 6 cut(s) | 672, 949, 1307, 1671, 2797, 3114 |
| Bst4CI | ACNGT | 5 cut(s) | 1423, 2250, 2407, 2605, 2681 |
| Bst6I | CTCTTC | 9 cut(s) | 197, 486, 1392, 1479, 2052, 2172, 2552, 2704, 3621 |
| BstAFI | CTTAAG | 1 cut(s) | 3818 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 881, 1142 |
| BstAUI | TGTACA | 1 cut(s) | 4092 |
| BstBI | TTCGAA | 2 cut(s) | 1813, 1848 |
| BstC8I | GCNNGC | 4 cut(s) | 1362, 1569, 3161, 4024 |
| BstDSI | CCRYGG | 2 cut(s) | 2294, 2406 |
| BstFNI | CGCG | 1 cut(s) | 4050 |
| BstH2I | RGCGCY | 2 cut(s) | 1361, 1532 |
| BstHHI | GCGC | 3 cut(s) | 1360, 1531, 4050 |
| BstMAI | GTCTC | 9 cut(s) | 1597, 1638, 1819, 2174, 2530, 3042, 3443, 3510, 3530 |
| BstMCI | CGRYCG | 2 cut(s) | 167, 4075 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 881, 922, 1139, 1142, 1364, 1373, 2856, 3936 |
| BstNI | CCWGG | 6 cut(s) | 672, 949, 1307, 1671, 2797, 3114 |
| BstNSI | RCATGY | 2 cut(s) | 666, 4093 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1755 |
| BstSCI | CCNGG | 7 cut(s) | 155, 670, 947, 1305, 1669, 2795, 3112 |
| BstSLI | GKGCMC | 1 cut(s) | 1628 |
| BstUI | CGCG | 1 cut(s) | 4050 |
| BstV1I | GCAGC | 7 cut(s) | 1117, 1120, 1129, 1183, 1351, 2102, 4057 |
| BstV2I | GAAGAC | 1 cut(s) | 51 |
| BstX2I | RGATCY | 2 cut(s) | 2360, 2554 |
| BstYI | RGATCY | 2 cut(s) | 2360, 2554 |
| BstZ17I | GTATAC | 1 cut(s) | 668 |
| BstZI | CGGCCG | 1 cut(s) | 4072 |
| Bsu15I | ATCGAT | 2 cut(s) | 167, 2694 |
| BsuI | GTATCC | 2 cut(s) | 1217, 3196 |
| BsuRI | GGCC | 9 cut(s) | 227, 466, 1376, 1571, 2293, 2800, 3846, 4067, 4074 |
| BsuTUI | ATCGAT | 2 cut(s) | 167, 2694 |
| BtgI | CCRYGG | 2 cut(s) | 2294, 2406 |
| BtsI | GCAGTG | 1 cut(s) | 3329 |
| BtsIMutI | CAGTG | 8 cut(s) | 1145, 1746, 2597, 2728, 3037, 3329, 3602, 3963 |
| BveI | ACCTGC | 1 cut(s) | 4019 |
| Cac8I | GCNNGC | 4 cut(s) | 1362, 1569, 3161, 4024 |
| CaiI | CAGNNNCTG | 1 cut(s) | 4006 |
| CfoI | GCGC | 3 cut(s) | 1360, 1531, 4050 |
| Cfr10I | RCCGGY | 1 cut(s) | 3914 |
| Cfr13I | GGNCC | 8 cut(s) | 1177, 1375, 1666, 2019, 2051, 2618, 3845, 3960 |
| ClaI | ATCGAT | 2 cut(s) | 167, 2694 |
| CseI | GACGC | 1 cut(s) | 4049 |
| Csp6I | GTAC | 9 cut(s) | 943, 1221, 1647, 1742, 2265, 2606, 3014, 3710, 4093 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2093, 2128 |
| CviQI | GTAC | 9 cut(s) | 943, 1221, 1647, 1742, 2265, 2606, 3014, 3710, 4093 |
| DraI | TTTAAA | 4 cut(s) | 768, 1281, 1317, 3424 |
| DriI | GACNNNNNGTC | 1 cut(s) | 4082 |
| EaeI | YGGCCR | 2 cut(s) | 2291, 4072 |
| EagI | CGGCCG | 1 cut(s) | 4072 |
| Eam1104I | CTCTTC | 9 cut(s) | 197, 486, 1392, 1479, 2052, 2172, 2552, 2704, 3621 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 4082 |
| EarI | CTCTTC | 9 cut(s) | 197, 486, 1392, 1479, 2052, 2172, 2552, 2704, 3621 |
| EclXI | CGGCCG | 1 cut(s) | 4072 |
| Eco130I | CCWWGG | 6 cut(s) | 449, 1349, 2022, 2910, 3232, 3841 |
| Eco24I | GRGCYC | 1 cut(s) | 2240 |
| Eco32I | GATATC | 1 cut(s) | 388 |
| Eco47I | GGWCC | 6 cut(s) | 1177, 1666, 2019, 2051, 2618, 3960 |
| Eco47III | AGCGCT | 2 cut(s) | 1359, 1530 |
| Eco52I | CGGCCG | 1 cut(s) | 4072 |
| Eco57I | CTGAAG | 2 cut(s) | 2076, 3987 |
| Eco88I | CYCGRG | 1 cut(s) | 2373 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1666, 2051, 3845 |
| EcoRII | CCWGG | 6 cut(s) | 670, 947, 1305, 1669, 2795, 3112 |
| EcoRV | GATATC | 1 cut(s) | 388 |
| EcoT14I | CCWWGG | 6 cut(s) | 449, 1349, 2022, 2910, 3232, 3841 |
| EcoT38I | GRGCYC | 1 cut(s) | 2240 |
| ErhI | CCWWGG | 6 cut(s) | 449, 1349, 2022, 2910, 3232, 3841 |
| Esp3I | CGTCTC | 2 cut(s) | 1819, 2174 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 260, 292, 2646, 2678 |
| FaqI | GGGAC | 3 cut(s) | 1652, 2064, 2134 |
| FbaI | TGATCA | 2 cut(s) | 2770, 3238 |
| FblI | GTMKAC | 3 cut(s) | 667, 3277, 4086 |
| FriOI | GRGCYC | 1 cut(s) | 2240 |
| GlaI | GCGC | 3 cut(s) | 1359, 1530, 4049 |
| GsaI | CCCAGC | 2 cut(s) | 2500, 2662 |
| GsuI | CTGGAG | 2 cut(s) | 931, 2779 |
| HaeII | RGCGCY | 2 cut(s) | 1361, 1532 |
| HaeIII | GGCC | 9 cut(s) | 227, 466, 1376, 1571, 2293, 2800, 3846, 4067, 4074 |
| HapII | CCGG | 4 cut(s) | 157, 3915, 4064, 4071 |
| HgaI | GACGC | 1 cut(s) | 4049 |
| HhaI | GCGC | 3 cut(s) | 1360, 1531, 4050 |
| Hin6I | GCGC | 3 cut(s) | 1358, 1529, 4048 |
| HinP1I | GCGC | 3 cut(s) | 1358, 1529, 4048 |
| HincII | GTYRAC | 4 cut(s) | 1510, 1870, 2246, 4087 |
| HindII | GTYRAC | 4 cut(s) | 1510, 1870, 2246, 4087 |
| HindIII | AAGCTT | 2 cut(s) | 914, 3267 |
| HpaII | CCGG | 4 cut(s) | 157, 3915, 4064, 4071 |
| HphI | GGTGA | 7 cut(s) | 2830, 3248, 3437, 3491, 3500, 3779, 3953 |
| Hpy99I | CGWCG | 2 cut(s) | 1438, 4080 |
| HpyCH4III | ACNGT | 5 cut(s) | 1423, 2250, 2407, 2605, 2681 |
| HpyCH4IV | ACGT | 1 cut(s) | 1859 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 881, 922, 1139, 1142, 1364, 1373, 2856, 3936 |
| HpySE526I | ACGT | 1 cut(s) | 1859 |
| HspAI | GCGC | 3 cut(s) | 1358, 1529, 4048 |
| KflI | GGGWCCC | 1 cut(s) | 1666 |
| KpnI | GGTACC | 1 cut(s) | 2609 |
| Ksp22I | TGATCA | 2 cut(s) | 2770, 3238 |
| LguI | GCTCTTC | 1 cut(s) | 1392 |
| LmnI | GCTCC | 5 cut(s) | 1096, 1526, 2426, 3762, 3814 |
| Lsp1109I | GCAGC | 7 cut(s) | 1117, 1120, 1129, 1183, 1351, 2102, 4057 |
| LweI | GCATC | 3 cut(s) | 1411, 1599, 2710 |
| MaeII | ACGT | 1 cut(s) | 1859 |
| MaeIII | GTNAC | 9 cut(s) | 654, 957, 2580, 3127, 3488, 3623, 3798, 3941, 4102 |
| MfeI | CAATTG | 2 cut(s) | 193, 3074 |
| MflI | RGATCY | 2 cut(s) | 2360, 2554 |
| MhlI | GDGCHC | 4 cut(s) | 1628, 2240, 2374, 2423 |
| MlsI | TGGCCA | 1 cut(s) | 2293 |
| MluNI | TGGCCA | 1 cut(s) | 2293 |
| MlyI | GAGTC | 5 cut(s) | 28, 65, 1150, 1765, 3756 |
| MmeI | TCCRAC | 5 cut(s) | 2299, 2468, 2947, 3770, 3784 |
| Mox20I | TGGCCA | 1 cut(s) | 2293 |
| MroXI | GAANNNNTTC | 2 cut(s) | 272, 861 |
| MscI | TGGCCA | 1 cut(s) | 2293 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2813, 3234 |
| Msp20I | TGGCCA | 1 cut(s) | 2293 |
| MspCI | CTTAAG | 1 cut(s) | 3818 |
| MspI | CCGG | 4 cut(s) | 157, 3915, 4064, 4071 |
| MspR9I | CCNGG | 7 cut(s) | 157, 672, 949, 1307, 1671, 2797, 3114 |
| MunI | CAATTG | 2 cut(s) | 193, 3074 |
| MvaI | CCWGG | 6 cut(s) | 672, 949, 1307, 1671, 2797, 3114 |
| MvnI | CGCG | 1 cut(s) | 4050 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 881, 922, 1139, 1142, 1364, 1373, 2856, 3936 |
| NciI | CCSGG | 1 cut(s) | 157 |
| NmuCI | GTSAC | 6 cut(s) | 957, 3127, 3488, 3623, 3941, 4102 |
| NspI | RCATGY | 2 cut(s) | 666, 4093 |
| NspV | TTCGAA | 2 cut(s) | 1813, 1848 |
| OliI | CACNNNNGTG | 1 cut(s) | 3234 |
| PaeR7I | CTCGAG | 1 cut(s) | 2373 |
| PciI | ACATGT | 2 cut(s) | 662, 4089 |
| PciSI | GCTCTTC | 1 cut(s) | 1392 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 710, 3757 |
| PdmI | GAANNNNTTC | 2 cut(s) | 272, 861 |
| PfeI | GAWTC | 8 cut(s) | 726, 1783, 2077, 2754, 3314, 3386, 3452, 3635 |
| Pfl23II | CGTACG | 1 cut(s) | 3709 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 2430, 2627, 3887 |
| PfoI | TCCNGGA | 1 cut(s) | 947 |
| Ple19I | CGATCG | 1 cut(s) | 167 |
| PleI | GAGTC | 5 cut(s) | 27, 64, 1150, 1764, 3756 |
| PpsI | GAGTC | 5 cut(s) | 27, 64, 1150, 1764, 3756 |
| PpuMI | RGGWCCY | 2 cut(s) | 1666, 2051 |
| PscI | ACATGT | 2 cut(s) | 662, 4089 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1755 |
| PshBI | ATTAAT | 1 cut(s) | 338 |
| PsiI | TTATAA | 1 cut(s) | 518 |
| Psp1406I | AACGTT | 1 cut(s) | 1859 |
| Psp5II | RGGWCCY | 2 cut(s) | 1666, 2051 |
| Psp6I | CCWGG | 6 cut(s) | 670, 947, 1305, 1669, 2795, 3112 |
| PspFI | CCCAGC | 2 cut(s) | 2496, 2658 |
| PspGI | CCWGG | 6 cut(s) | 670, 947, 1305, 1669, 2795, 3112 |
| PspLI | CGTACG | 1 cut(s) | 3709 |
| PspPI | GGNCC | 8 cut(s) | 1177, 1375, 1666, 2019, 2051, 2618, 3845, 3960 |
| PspPPI | RGGWCCY | 2 cut(s) | 1666, 2051 |
| PspXI | VCTCGAGB | 1 cut(s) | 2373 |
| PsrI | GAACNNNNNNTAC | 6 cut(s) | 1482, 1514, 3290, 3322, 3393, 3425 |
| PstNI | CAGNNNCTG | 1 cut(s) | 4006 |
| PsuI | RGATCY | 2 cut(s) | 2360, 2554 |
| PvuI | CGATCG | 1 cut(s) | 167 |
| RsaI | GTAC | 9 cut(s) | 944, 1222, 1648, 1743, 2266, 2607, 3015, 3711, 4094 |
| RsaNI | GTAC | 9 cut(s) | 943, 1221, 1647, 1742, 2265, 2606, 3014, 3710, 4093 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2813, 3234 |
| SalI | GTCGAC | 1 cut(s) | 4085 |
| SapI | GCTCTTC | 1 cut(s) | 1392 |
| Sau96I | GGNCC | 8 cut(s) | 1177, 1375, 1666, 2019, 2051, 2618, 3845, 3960 |
| SchI | GAGTC | 5 cut(s) | 28, 65, 1150, 1765, 3756 |
| ScrFI | CCNGG | 7 cut(s) | 157, 672, 949, 1307, 1671, 2797, 3114 |
| SduI | GDGCHC | 4 cut(s) | 1628, 2240, 2374, 2423 |
| SfaNI | GCATC | 3 cut(s) | 1411, 1599, 2710 |
| Sfr274I | CTCGAG | 1 cut(s) | 2373 |
| SfuI | TTCGAA | 2 cut(s) | 1813, 1848 |
| SinI | GGWCC | 6 cut(s) | 1177, 1666, 2019, 2051, 2618, 3960 |
| SlaI | CTCGAG | 1 cut(s) | 2373 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2813, 3234 |
| SmlI | CTYRAG | 3 cut(s) | 1822, 2373, 3818 |
| SmoI | CTYRAG | 3 cut(s) | 1822, 2373, 3818 |
| SpeI | ACTAGT | 1 cut(s) | 2539 |
| SsiI | CCGC | 8 cut(s) | 485, 1088, 1612, 1943, 3930, 3933, 3936, 3939 |
| SspI | AATATT | 5 cut(s) | 247, 514, 1810, 2199, 3984 |
| StyD4I | CCNGG | 7 cut(s) | 155, 670, 947, 1305, 1669, 2795, 3112 |
| StyI | CCWWGG | 6 cut(s) | 449, 1349, 2022, 2910, 3232, 3841 |
| TaaI | ACNGT | 5 cut(s) | 1423, 2250, 2407, 2605, 2681 |
| TaiI | ACGT | 1 cut(s) | 1862 |
| TatI | WGTACW | 3 cut(s) | 1220, 1741, 4092 |
| TauI | GCSGC | 5 cut(s) | 1091, 1945, 3933, 3936, 3939 |
| TfiI | GAWTC | 8 cut(s) | 726, 1783, 2077, 2754, 3314, 3386, 3452, 3635 |
| TscAI | CASTG | 8 cut(s) | 1152, 1753, 2597, 2735, 3037, 3329, 3609, 3970 |
| TseFI | GTSAC | 6 cut(s) | 957, 3127, 3488, 3623, 3941, 4102 |
| TseI | GCWGC | 7 cut(s) | 1130, 1133, 1142, 1196, 1364, 2090, 4045 |
| Tsp45I | GTSAC | 6 cut(s) | 957, 3127, 3488, 3623, 3941, 4102 |
| TspDTI | ATGAA | 9 cut(s) | 104, 431, 572, 1064, 1509, 1779, 1896, 2441, 3327 |
| TspGWI | ACGGA | 6 cut(s) | 725, 2198, 2311, 2504, 3146, 3697 |
| TspRI | CASTG | 8 cut(s) | 1152, 1753, 2597, 2735, 3037, 3329, 3609, 3970 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 2430, 2627, 3887 |
| Vha464I | CTTAAG | 1 cut(s) | 3818 |
| VpaK11BI | GGWCC | 6 cut(s) | 1177, 1666, 2019, 2051, 2618, 3960 |
| VspI | ATTAAT | 1 cut(s) | 338 |
| XapI | RAATTY | 9 cut(s) | 435, 617, 763, 770, 776, 1108, 1615, 2227, 2343 |
| XbaI | TCTAGA | 1 cut(s) | 865 |
| XceI | RCATGY | 2 cut(s) | 666, 4093 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1385, 2029 |
| XhoI | CTCGAG | 1 cut(s) | 2373 |
| XmaJI | CCTAGG | 1 cut(s) | 1349 |
| XmiI | GTMKAC | 3 cut(s) | 667, 3277, 4086 |
| XmnI | GAANNNNTTC | 2 cut(s) | 272, 861 |