Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 31 |
| AcsI | RAATTY | 1 cut(s) | 67 |
| AcuI | CTGAAG | 1 cut(s) | 236 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 223, 298 |
| AgsI | TTSAA | 1 cut(s) | 263 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 16, 48 |
| AluBI | AGCT | 2 cut(s) | 213, 236 |
| AluI | AGCT | 2 cut(s) | 213, 236 |
| Alw26I | GTCTC | 2 cut(s) | 8, 277 |
| AoxI | GGCC | 1 cut(s) | 127 |
| ApoI | RAATTY | 1 cut(s) | 67 |
| AseI | ATTAAT | 1 cut(s) | 9 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 321 |
| AspS9I | GGNCC | 1 cut(s) | 127 |
| AsuC2I | CCSGG | 1 cut(s) | 292 |
| AsuHPI | GGTGA | 1 cut(s) | 71 |
| BauI | CACGAG | 2 cut(s) | 36, 267 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 17, 51 |
| BcnI | CCSGG | 1 cut(s) | 292 |
| BcoDI | GTCTC | 2 cut(s) | 8, 277 |
| Bme1390I | CCNGG | 1 cut(s) | 292 |
| BmgT120I | GGNCC | 1 cut(s) | 127 |
| BmiI | GGNNCC | 1 cut(s) | 303 |
| BmrFI | CCNGG | 1 cut(s) | 292 |
| BmsI | GCATC | 1 cut(s) | 103 |
| Bpu10I | CCTNAGC | 1 cut(s) | 237 |
| BpuEI | CTTGAG | 1 cut(s) | 35 |
| BpuMI | CCSGG | 1 cut(s) | 292 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 16, 46 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 223, 298 |
| BseGI | GGATG | 1 cut(s) | 247 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 223, 298 |
| BseMII | CTCAG | 2 cut(s) | 251, 288 |
| BseYI | CCCAGC | 1 cut(s) | 143 |
| BshFI | GGCC | 1 cut(s) | 129 |
| BsiSI | CCGG | 1 cut(s) | 292 |
| BslFI | GGGAC | 1 cut(s) | 160 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 223, 298 |
| BsmAI | GTCTC | 2 cut(s) | 8, 277 |
| BsmBI | CGTCTC | 1 cut(s) | 8 |
| BsmFI | GGGAC | 1 cut(s) | 160 |
| BsmI | GAATGC | 1 cut(s) | 292 |
| BsnI | GGCC | 1 cut(s) | 129 |
| Bsp143I | GATC | 1 cut(s) | 61 |
| BspANI | GGCC | 1 cut(s) | 129 |
| BspCNI | CTCAG | 2 cut(s) | 250, 287 |
| BspLI | GGNNCC | 1 cut(s) | 303 |
| BspQI | GCTCTTC | 1 cut(s) | 255 |
| BssMI | GATC | 1 cut(s) | 61 |
| BssSI | CACGAG | 2 cut(s) | 36, 267 |
| Bst2BI | CACGAG | 2 cut(s) | 36, 267 |
| Bst6I | CTCTTC | 1 cut(s) | 255 |
| BstDEI | CTNAG | 2 cut(s) | 237, 274 |
| BstF5I | GGATG | 1 cut(s) | 247 |
| BstKTI | GATC | 1 cut(s) | 64 |
| BstMAI | GTCTC | 2 cut(s) | 8, 277 |
| BstMBI | GATC | 1 cut(s) | 61 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 219 |
| BstSCI | CCNGG | 1 cut(s) | 290 |
| BsuRI | GGCC | 1 cut(s) | 129 |
| BtsCI | GGATG | 1 cut(s) | 247 |
| Cfr13I | GGNCC | 1 cut(s) | 127 |
| CviJI | RGCY | 6 cut(s) | 49, 129, 213, 236, 248, 302 |
| CviKI_1 | RGCY | 6 cut(s) | 49, 129, 213, 236, 248, 302 |
| DdeI | CTNAG | 2 cut(s) | 237, 274 |
| DpnI | GATC | 1 cut(s) | 63 |
| DpnII | GATC | 1 cut(s) | 61 |
| Eam1104I | CTCTTC | 1 cut(s) | 255 |
| EarI | CTCTTC | 1 cut(s) | 255 |
| Eco57I | CTGAAG | 1 cut(s) | 236 |
| EcoO109I | RGGNCCY | 1 cut(s) | 127 |
| EcoRI | GAATTC | 1 cut(s) | 67 |
| Esp3I | CGTCTC | 1 cut(s) | 8 |
| FaiI | YATR | 6 cut(s) | 206, 284, 307, 309, 342, 344 |
| FaqI | GGGAC | 1 cut(s) | 160 |
| FauNDI | CATATG | 2 cut(s) | 307, 342 |
| FokI | GGATG | 1 cut(s) | 254 |
| GsaI | CCCAGC | 1 cut(s) | 147 |
| HaeIII | GGCC | 1 cut(s) | 129 |
| HapII | CCGG | 1 cut(s) | 292 |
| HinfI | GANTC | 1 cut(s) | 158 |
| HpaII | CCGG | 1 cut(s) | 292 |
| HphI | GGTGA | 1 cut(s) | 71 |
| Hpy188I | TCNGA | 4 cut(s) | 66, 226, 255, 327 |
| Hpy188III | TCNNGA | 1 cut(s) | 239 |
| HpyCH4IV | ACGT | 2 cut(s) | 17, 31 |
| HpyCH4V | TGCA | 2 cut(s) | 199, 346 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 219 |
| HpyF3I | CTNAG | 2 cut(s) | 237, 274 |
| HpySE526I | ACGT | 2 cut(s) | 17, 31 |
| Kzo9I | GATC | 1 cut(s) | 61 |
| LguI | GCTCTTC | 1 cut(s) | 255 |
| LmnI | GCTCC | 2 cut(s) | 218, 307 |
| LpnPI | CCDG | 3 cut(s) | 129, 224, 305 |
| LweI | GCATC | 1 cut(s) | 103 |
| MaeII | ACGT | 2 cut(s) | 17, 31 |
| MalI | GATC | 1 cut(s) | 63 |
| MboI | GATC | 1 cut(s) | 61 |
| MboII | GAAGA | 2 cut(s) | 242, 329 |
| MluCI | AATT | 1 cut(s) | 67 |
| MmeI | TCCRAC | 1 cut(s) | 294 |
| MnlI | CCTC | 3 cut(s) | 18, 49, 276 |
| MroXI | GAANNNNTTC | 1 cut(s) | 321 |
| MseI | TTAA | 2 cut(s) | 9, 123 |
| MspI | CCGG | 1 cut(s) | 292 |
| MspR9I | CCNGG | 1 cut(s) | 292 |
| Mva1269I | GAATGC | 1 cut(s) | 292 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 219 |
| NciI | CCSGG | 1 cut(s) | 292 |
| NdeI | CATATG | 2 cut(s) | 307, 342 |
| NdeII | GATC | 1 cut(s) | 61 |
| NlaIV | GGNNCC | 1 cut(s) | 303 |
| PciSI | GCTCTTC | 1 cut(s) | 255 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 70 |
| PctI | GAATGC | 1 cut(s) | 292 |
| PdmI | GAANNNNTTC | 1 cut(s) | 321 |
| PfeI | GAWTC | 1 cut(s) | 158 |
| PshBI | ATTAAT | 1 cut(s) | 9 |
| Psp1406I | AACGTT | 1 cut(s) | 31 |
| PspFI | CCCAGC | 1 cut(s) | 143 |
| PspN4I | GGNNCC | 1 cut(s) | 303 |
| PspPI | GGNCC | 1 cut(s) | 127 |
| SapI | GCTCTTC | 1 cut(s) | 255 |
| SaqAI | TTAA | 2 cut(s) | 9, 123 |
| Sau3AI | GATC | 1 cut(s) | 61 |
| Sau96I | GGNCC | 1 cut(s) | 127 |
| ScrFI | CCNGG | 1 cut(s) | 292 |
| SetI | ASST | 5 cut(s) | 20, 34, 215, 238, 268 |
| SfaNI | GCATC | 1 cut(s) | 103 |
| SmlI | CTYRAG | 1 cut(s) | 50 |
| SmoI | CTYRAG | 1 cut(s) | 50 |
| Sse9I | AATT | 1 cut(s) | 67 |
| SspI | AATATT | 1 cut(s) | 194 |
| StyD4I | CCNGG | 1 cut(s) | 290 |
| TaiI | ACGT | 2 cut(s) | 20, 34 |
| TaqI | TCGA | 2 cut(s) | 97, 135 |
| TasI | AATT | 1 cut(s) | 67 |
| TfiI | GAWTC | 1 cut(s) | 158 |
| Tru1I | TTAA | 2 cut(s) | 9, 123 |
| Tru9I | TTAA | 2 cut(s) | 9, 123 |
| TspDTI | ATGAA | 2 cut(s) | 299, 329 |
| VspI | ATTAAT | 1 cut(s) | 9 |
| XapI | RAATTY | 1 cut(s) | 67 |
| XmnI | GAANNNNTTC | 1 cut(s) | 321 |