Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 181 |
| AccIII | TCCGGA | 1 cut(s) | 165 |
| AclWI | GGATC | 1 cut(s) | 219 |
| AcsI | RAATTY | 1 cut(s) | 319 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 181, 213 |
| AgsI | TTSAA | 1 cut(s) | 8 |
| AluBI | AGCT | 1 cut(s) | 48 |
| AluI | AGCT | 1 cut(s) | 48 |
| Alw26I | GTCTC | 1 cut(s) | 257 |
| AlwI | GGATC | 1 cut(s) | 219 |
| Ama87I | CYCGRG | 1 cut(s) | 310 |
| Aor13HI | TCCGGA | 1 cut(s) | 165 |
| AoxI | GGCC | 3 cut(s) | 82, 204, 313 |
| ApaI | GGGCCC | 1 cut(s) | 317 |
| ApoI | RAATTY | 1 cut(s) | 319 |
| AspS9I | GGNCC | 4 cut(s) | 168, 204, 313, 314 |
| AsuC2I | CCSGG | 2 cut(s) | 311, 312 |
| AvaI | CYCGRG | 1 cut(s) | 310 |
| AvaII | GGWCC | 1 cut(s) | 168 |
| BaeGI | GKGCMC | 1 cut(s) | 317 |
| BanII | GRGCYC | 1 cut(s) | 317 |
| BbsI | GAAGAC | 1 cut(s) | 22 |
| BccI | CCATC | 2 cut(s) | 116, 226 |
| BcnI | CCSGG | 2 cut(s) | 311, 312 |
| BcoDI | GTCTC | 1 cut(s) | 257 |
| BfaI | CTAG | 2 cut(s) | 41, 218 |
| Bme1390I | CCNGG | 2 cut(s) | 311, 312 |
| Bme18I | GGWCC | 1 cut(s) | 168 |
| BmeT110I | CYCGRG | 1 cut(s) | 310 |
| BmgT120I | GGNCC | 4 cut(s) | 168, 204, 313, 314 |
| BmiI | GGNNCC | 2 cut(s) | 205, 315 |
| BmrFI | CCNGG | 2 cut(s) | 311, 312 |
| BmsI | GCATC | 1 cut(s) | 304 |
| BpiI | GAAGAC | 1 cut(s) | 22 |
| BpuMI | CCSGG | 2 cut(s) | 311, 312 |
| BsaBI | GATNNNNATC | 1 cut(s) | 294 |
| BsaJI | CCNNGG | 3 cut(s) | 207, 309, 310 |
| BsaWI | WCCGGW | 1 cut(s) | 165 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 93, 123 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 181, 213 |
| Bse1I | ACTGG | 1 cut(s) | 59 |
| Bse8I | GATNNNNATC | 1 cut(s) | 294 |
| BseAI | TCCGGA | 1 cut(s) | 165 |
| BseDI | CCNNGG | 3 cut(s) | 207, 309, 310 |
| BseGI | GGATG | 2 cut(s) | 190, 295 |
| BseJI | GATNNNNATC | 1 cut(s) | 294 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 181, 213 |
| BseMII | CTCAG | 2 cut(s) | 77, 252 |
| BseNI | ACTGG | 1 cut(s) | 59 |
| BseSI | GKGCMC | 1 cut(s) | 317 |
| BshFI | GGCC | 3 cut(s) | 84, 206, 315 |
| BsiHKCI | CYCGRG | 1 cut(s) | 310 |
| BsiSI | CCGG | 2 cut(s) | 166, 311 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 181, 213 |
| BsmAI | GTCTC | 1 cut(s) | 257 |
| BsmBI | CGTCTC | 1 cut(s) | 257 |
| BsmI | GAATGC | 1 cut(s) | 137 |
| BsnI | GGCC | 3 cut(s) | 84, 206, 315 |
| BsoBI | CYCGRG | 1 cut(s) | 310 |
| Bsp120I | GGGCCC | 1 cut(s) | 313 |
| Bsp1286I | GDGCHC | 1 cut(s) | 317 |
| Bsp13I | TCCGGA | 1 cut(s) | 165 |
| Bsp143I | GATC | 2 cut(s) | 211, 270 |
| BspANI | GGCC | 3 cut(s) | 84, 206, 315 |
| BspCNI | CTCAG | 2 cut(s) | 78, 253 |
| BspEI | TCCGGA | 1 cut(s) | 165 |
| BspLI | GGNNCC | 2 cut(s) | 205, 315 |
| BspPI | GGATC | 1 cut(s) | 219 |
| BsrI | ACTGG | 1 cut(s) | 59 |
| BssECI | CCNNGG | 3 cut(s) | 207, 309, 310 |
| BssMI | GATC | 2 cut(s) | 211, 270 |
| BssT1I | CCWWGG | 1 cut(s) | 207 |
| Bst6I | CTCTTC | 1 cut(s) | 290 |
| BstDEI | CTNAG | 2 cut(s) | 86, 261 |
| BstF5I | GGATG | 2 cut(s) | 190, 295 |
| BstKTI | GATC | 2 cut(s) | 214, 273 |
| BstMAI | GTCTC | 1 cut(s) | 257 |
| BstMBI | GATC | 2 cut(s) | 211, 270 |
| BstSCI | CCNGG | 2 cut(s) | 309, 310 |
| BstSLI | GKGCMC | 1 cut(s) | 317 |
| BstV2I | GAAGAC | 1 cut(s) | 22 |
| BsuRI | GGCC | 3 cut(s) | 84, 206, 315 |
| BtsCI | GGATG | 2 cut(s) | 190, 295 |
| BtsIMutI | CAGTG | 1 cut(s) | 52 |
| Cfr13I | GGNCC | 4 cut(s) | 168, 204, 313, 314 |
| Cfr9I | CCCGGG | 1 cut(s) | 310 |
| CviJI | RGCY | 7 cut(s) | 48, 84, 206, 217, 236, 278, 315 |
| CviKI_1 | RGCY | 7 cut(s) | 48, 84, 206, 217, 236, 278, 315 |
| DdeI | CTNAG | 2 cut(s) | 86, 261 |
| DpnI | GATC | 2 cut(s) | 213, 272 |
| DpnII | GATC | 2 cut(s) | 211, 270 |
| Eam1104I | CTCTTC | 1 cut(s) | 290 |
| EarI | CTCTTC | 1 cut(s) | 290 |
| Eco130I | CCWWGG | 1 cut(s) | 207 |
| Eco24I | GRGCYC | 1 cut(s) | 317 |
| Eco47I | GGWCC | 1 cut(s) | 168 |
| Eco88I | CYCGRG | 1 cut(s) | 310 |
| EcoO109I | RGGNCCY | 1 cut(s) | 204 |
| EcoT14I | CCWWGG | 1 cut(s) | 207 |
| EcoT22I | ATGCAT | 2 cut(s) | 137, 297 |
| EcoT38I | GRGCYC | 1 cut(s) | 317 |
| ErhI | CCWWGG | 1 cut(s) | 207 |
| Esp3I | CGTCTC | 1 cut(s) | 257 |
| FaiI | YATR | 3 cut(s) | 81, 128, 293 |
| FokI | GGATG | 2 cut(s) | 197, 282 |
| FriOI | GRGCYC | 1 cut(s) | 317 |
| FspBI | CTAG | 2 cut(s) | 41, 218 |
| HaeIII | GGCC | 3 cut(s) | 84, 206, 315 |
| HapII | CCGG | 2 cut(s) | 166, 311 |
| HpaII | CCGG | 2 cut(s) | 166, 311 |
| Hpy188I | TCNGA | 3 cut(s) | 118, 246, 262 |
| Hpy188III | TCNNGA | 1 cut(s) | 166 |
| Hpy99I | CGWCG | 1 cut(s) | 230 |
| HpyCH4V | TGCA | 3 cut(s) | 74, 135, 295 |
| HpyF3I | CTNAG | 2 cut(s) | 86, 261 |
| Kpn2I | TCCGGA | 1 cut(s) | 165 |
| Kzo9I | GATC | 2 cut(s) | 211, 270 |
| LpnPI | CCDG | 5 cut(s) | 40, 98, 160, 179, 324 |
| LweI | GCATC | 1 cut(s) | 304 |
| MaeI | CTAG | 2 cut(s) | 41, 218 |
| MaeIII | GTNAC | 2 cut(s) | 89, 220 |
| MalI | GATC | 2 cut(s) | 213, 272 |
| MboI | GATC | 2 cut(s) | 211, 270 |
| MboII | GAAGA | 2 cut(s) | 27, 277 |
| MhlI | GDGCHC | 1 cut(s) | 317 |
| MluCI | AATT | 3 cut(s) | 75, 195, 319 |
| MnlI | CCTC | 6 cut(s) | 5, 181, 184, 244, 250, 309 |
| Mph1103I | ATGCAT | 2 cut(s) | 137, 297 |
| MroI | TCCGGA | 1 cut(s) | 165 |
| MseI | TTAA | 1 cut(s) | 328 |
| MspI | CCGG | 2 cut(s) | 166, 311 |
| MspR9I | CCNGG | 2 cut(s) | 311, 312 |
| Mva1269I | GAATGC | 1 cut(s) | 137 |
| NciI | CCSGG | 2 cut(s) | 311, 312 |
| NdeII | GATC | 2 cut(s) | 211, 270 |
| NlaIV | GGNNCC | 2 cut(s) | 205, 315 |
| NmuCI | GTSAC | 1 cut(s) | 89 |
| NsiI | ATGCAT | 2 cut(s) | 137, 297 |
| PctI | GAATGC | 1 cut(s) | 137 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 181 |
| PspN4I | GGNNCC | 2 cut(s) | 205, 315 |
| PspOMI | GGGCCC | 1 cut(s) | 313 |
| PspPI | GGNCC | 4 cut(s) | 168, 204, 313, 314 |
| SaqAI | TTAA | 1 cut(s) | 328 |
| Sau3AI | GATC | 2 cut(s) | 211, 270 |
| Sau96I | GGNCC | 4 cut(s) | 168, 204, 313, 314 |
| ScrFI | CCNGG | 2 cut(s) | 311, 312 |
| SduI | GDGCHC | 1 cut(s) | 317 |
| SetI | ASST | 4 cut(s) | 50, 162, 173, 242 |
| SfaNI | GCATC | 1 cut(s) | 304 |
| SinI | GGWCC | 1 cut(s) | 168 |
| SmaI | CCCGGG | 1 cut(s) | 312 |
| Sse9I | AATT | 3 cut(s) | 75, 195, 319 |
| SspMI | CTAG | 2 cut(s) | 41, 218 |
| StyD4I | CCNGG | 2 cut(s) | 309, 310 |
| StyI | CCWWGG | 1 cut(s) | 207 |
| TaqI | TCGA | 1 cut(s) | 288 |
| TasI | AATT | 3 cut(s) | 75, 195, 319 |
| Tru1I | TTAA | 1 cut(s) | 328 |
| Tru9I | TTAA | 1 cut(s) | 328 |
| TscAI | CASTG | 1 cut(s) | 59 |
| TseFI | GTSAC | 1 cut(s) | 89 |
| Tsp45I | GTSAC | 1 cut(s) | 89 |
| TspGWI | ACGGA | 1 cut(s) | 281 |
| TspMI | CCCGGG | 1 cut(s) | 310 |
| TspRI | CASTG | 1 cut(s) | 59 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 181 |
| VpaK11BI | GGWCC | 1 cut(s) | 168 |
| XapI | RAATTY | 1 cut(s) | 319 |
| XmaI | CCCGGG | 1 cut(s) | 310 |
| XspI | CTAG | 2 cut(s) | 41, 218 |
| Zsp2I | ATGCAT | 2 cut(s) | 137, 297 |