ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 264 |
| AccII | CGCG | 1 cut(s) | 309 |
| AciI | CCGC | 1 cut(s) | 511 |
| AclWI | GGATC | 2 cut(s) | 12, 456 |
| AcoI | YGGCCR | 1 cut(s) | 644 |
| AflII | CTTAAG | 1 cut(s) | 242 |
| AgeI | ACCGGT | 1 cut(s) | 657 |
| AgsI | TTSAA | 5 cut(s) | 67, 358, 470, 664, 671 |
| AluBI | AGCT | 4 cut(s) | 148, 508, 524, 674 |
| AluI | AGCT | 4 cut(s) | 148, 508, 524, 674 |
| Alw21I | GWGCWC | 1 cut(s) | 626 |
| Alw26I | GTCTC | 1 cut(s) | 129 |
| AlwI | GGATC | 2 cut(s) | 12, 456 |
| AoxI | GGCC | 2 cut(s) | 89, 644 |
| ApeKI | GCWGC | 1 cut(s) | 508 |
| AsiGI | ACCGGT | 1 cut(s) | 657 |
| AspLEI | GCGC | 2 cut(s) | 265, 309 |
| AspS9I | GGNCC | 2 cut(s) | 392, 473 |
| AsuC2I | CCSGG | 2 cut(s) | 204, 428 |
| AsuHPI | GGTGA | 2 cut(s) | 355, 647 |
| AvaII | GGWCC | 2 cut(s) | 392, 473 |
| BalI | TGGCCA | 1 cut(s) | 646 |
| BanII | GRGCYC | 1 cut(s) | 160 |
| BbsI | GAAGAC | 1 cut(s) | 485 |
| Bbv12I | GWGCWC | 1 cut(s) | 626 |
| BbvI | GCAGC | 1 cut(s) | 495 |
| BccI | CCATC | 1 cut(s) | 241 |
| BcnI | CCSGG | 2 cut(s) | 204, 428 |
| BcoDI | GTCTC | 1 cut(s) | 129 |
| BfaI | CTAG | 2 cut(s) | 57, 161 |
| BfrI | CTTAAG | 1 cut(s) | 242 |
| BisI | GCNGC | 1 cut(s) | 509 |
| BlsI | GCNGC | 1 cut(s) | 510 |
| Bme1390I | CCNGG | 2 cut(s) | 204, 428 |
| Bme18I | GGWCC | 2 cut(s) | 392, 473 |
| BmgT120I | GGNCC | 2 cut(s) | 392, 473 |
| BmrFI | CCNGG | 2 cut(s) | 204, 428 |
| BmsI | GCATC | 5 cut(s) | 37, 45, 265, 274, 583 |
| BpiI | GAAGAC | 1 cut(s) | 485 |
| Bpu10I | CCTNAGC | 1 cut(s) | 614 |
| BpuMI | CCSGG | 2 cut(s) | 204, 428 |
| BsaAI | YACGTR | 1 cut(s) | 486 |
| BsaBI | GATNNNNATC | 1 cut(s) | 594 |
| BsaJI | CCNNGG | 2 cut(s) | 335, 647 |
| BsaWI | WCCGGW | 2 cut(s) | 399, 657 |
| Bse118I | RCCGGY | 1 cut(s) | 657 |
| Bse8I | GATNNNNATC | 1 cut(s) | 594 |
| BseDI | CCNNGG | 2 cut(s) | 335, 647 |
| BseGI | GGATG | 1 cut(s) | 280 |
| BseJI | GATNNNNATC | 1 cut(s) | 594 |
| BseMII | CTCAG | 1 cut(s) | 95 |
| BseXI | GCAGC | 1 cut(s) | 495 |
| Bsh1236I | CGCG | 1 cut(s) | 309 |
| BshFI | GGCC | 2 cut(s) | 91, 646 |
| BshTI | ACCGGT | 1 cut(s) | 657 |
| BsiHKAI | GWGCWC | 1 cut(s) | 626 |
| BsiSI | CCGG | 4 cut(s) | 203, 400, 427, 658 |
| BslFI | GGGAC | 1 cut(s) | 299 |
| BsmAI | GTCTC | 1 cut(s) | 129 |
| BsmFI | GGGAC | 1 cut(s) | 299 |
| BsnI | GGCC | 2 cut(s) | 91, 646 |
| Bsp1286I | GDGCHC | 2 cut(s) | 160, 626 |
| Bsp143I | GATC | 5 cut(s) | 4, 75, 120, 448, 595 |
| Bsp19I | CCATGG | 1 cut(s) | 335 |
| BspACI | CCGC | 1 cut(s) | 511 |
| BspANI | GGCC | 2 cut(s) | 91, 646 |
| BspCNI | CTCAG | 1 cut(s) | 94 |
| BspFNI | CGCG | 1 cut(s) | 309 |
| BspPI | GGATC | 2 cut(s) | 12, 456 |
| BspTI | CTTAAG | 1 cut(s) | 242 |
| BsrFI | RCCGGY | 1 cut(s) | 657 |
| BssAI | RCCGGY | 1 cut(s) | 657 |
| BssECI | CCNNGG | 2 cut(s) | 335, 647 |
| BssMI | GATC | 5 cut(s) | 4, 75, 120, 448, 595 |
| BssT1I | CCWWGG | 2 cut(s) | 335, 647 |
| Bst4CI | ACNGT | 3 cut(s) | 374, 392, 628 |
| BstAFI | CTTAAG | 1 cut(s) | 242 |
| BstBAI | YACGTR | 1 cut(s) | 486 |
| BstC8I | GCNNGC | 1 cut(s) | 622 |
| BstDEI | CTNAG | 3 cut(s) | 81, 322, 614 |
| BstDSI | CCRYGG | 1 cut(s) | 335 |
| BstF5I | GGATG | 1 cut(s) | 280 |
| BstFNI | CGCG | 1 cut(s) | 309 |
| BstHHI | GCGC | 2 cut(s) | 265, 309 |
| BstKTI | GATC | 5 cut(s) | 7, 78, 123, 451, 598 |
| BstMAI | GTCTC | 1 cut(s) | 129 |
| BstMBI | GATC | 5 cut(s) | 4, 75, 120, 448, 595 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 176 |
| BstSCI | CCNGG | 2 cut(s) | 202, 426 |
| BstUI | CGCG | 1 cut(s) | 309 |
| BstV1I | GCAGC | 1 cut(s) | 495 |
| BstV2I | GAAGAC | 1 cut(s) | 485 |
| BstX2I | RGATCY | 2 cut(s) | 4, 448 |
| BstYI | RGATCY | 2 cut(s) | 4, 448 |
| BsuRI | GGCC | 2 cut(s) | 91, 646 |
| BtgI | CCRYGG | 1 cut(s) | 335 |
| BtsCI | GGATG | 1 cut(s) | 280 |
| Cac8I | GCNNGC | 1 cut(s) | 622 |
| CfoI | GCGC | 2 cut(s) | 265, 309 |
| Cfr10I | RCCGGY | 1 cut(s) | 657 |
| Cfr13I | GGNCC | 2 cut(s) | 392, 473 |
| CspAI | ACCGGT | 1 cut(s) | 657 |
| CviAII | CATG | 1 cut(s) | 336 |
| DdeI | CTNAG | 3 cut(s) | 81, 322, 614 |
| DpnI | GATC | 5 cut(s) | 6, 77, 122, 450, 597 |
| DpnII | GATC | 5 cut(s) | 4, 75, 120, 448, 595 |
| EaeI | YGGCCR | 1 cut(s) | 644 |
| Eco130I | CCWWGG | 2 cut(s) | 335, 647 |
| Eco24I | GRGCYC | 1 cut(s) | 160 |
| Eco32I | GATATC | 1 cut(s) | 13 |
| Eco47I | GGWCC | 2 cut(s) | 392, 473 |
| EcoRV | GATATC | 1 cut(s) | 13 |
| EcoT14I | CCWWGG | 2 cut(s) | 335, 647 |
| EcoT38I | GRGCYC | 1 cut(s) | 160 |
| ErhI | CCWWGG | 2 cut(s) | 335, 647 |
| FaeI | CATG | 1 cut(s) | 339 |
| FaiI | YATR | 9 cut(s) | 109, 270, 272, 281, 337, 444, 561, 600, 608 |
| FaqI | GGGAC | 1 cut(s) | 299 |
| FatI | CATG | 1 cut(s) | 335 |
| FauNDI | CATATG | 1 cut(s) | 270 |
| Fnu4HI | GCNGC | 1 cut(s) | 509 |
| FokI | GGATG | 1 cut(s) | 287 |
| FriOI | GRGCYC | 1 cut(s) | 160 |
| Fsp4HI | GCNGC | 1 cut(s) | 509 |
| FspBI | CTAG | 2 cut(s) | 57, 161 |
| FspI | TGCGCA | 1 cut(s) | 264 |
| GlaI | GCGC | 2 cut(s) | 264, 308 |
| GluI | GCNGC | 1 cut(s) | 509 |
| HaeIII | GGCC | 2 cut(s) | 91, 646 |
| HapII | CCGG | 4 cut(s) | 203, 400, 427, 658 |
| HhaI | GCGC | 2 cut(s) | 265, 309 |
| Hin1II | CATG | 1 cut(s) | 339 |
| Hin6I | GCGC | 2 cut(s) | 263, 307 |
| HinP1I | GCGC | 2 cut(s) | 263, 307 |
| HindIII | AAGCTT | 2 cut(s) | 146, 672 |
| HinfI | GANTC | 3 cut(s) | 85, 326, 590 |
| HpaII | CCGG | 4 cut(s) | 203, 400, 427, 658 |
| HphI | GGTGA | 2 cut(s) | 355, 647 |
| Hpy188I | TCNGA | 5 cut(s) | 84, 406, 477, 499, 595 |
| Hpy188III | TCNNGA | 3 cut(s) | 8, 223, 455 |
| HpyAV | CCTTC | 3 cut(s) | 61, 188, 559 |
| HpyCH4III | ACNGT | 3 cut(s) | 374, 392, 628 |
| HpyCH4IV | ACGT | 1 cut(s) | 485 |
| HpyCH4V | TGCA | 4 cut(s) | 30, 42, 531, 574 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 176 |
| HpyF3I | CTNAG | 3 cut(s) | 81, 322, 614 |
| HpySE526I | ACGT | 1 cut(s) | 485 |
| Hsp92II | CATG | 1 cut(s) | 339 |
| HspAI | GCGC | 2 cut(s) | 263, 307 |
| Kzo9I | GATC | 5 cut(s) | 4, 75, 120, 448, 595 |
| LpnPI | CCDG | 7 cut(s) | 208, 216, 274, 413, 440, 440, 671 |
| Lsp1109I | GCAGC | 1 cut(s) | 495 |
| LweI | GCATC | 5 cut(s) | 37, 45, 265, 274, 583 |
| MaeI | CTAG | 2 cut(s) | 57, 161 |
| MaeII | ACGT | 1 cut(s) | 485 |
| MalI | GATC | 5 cut(s) | 6, 77, 122, 450, 597 |
| MboI | GATC | 5 cut(s) | 4, 75, 120, 448, 595 |
| MboII | GAAGA | 2 cut(s) | 443, 490 |
| MflI | RGATCY | 2 cut(s) | 4, 448 |
| MhlI | GDGCHC | 2 cut(s) | 160, 626 |
| MlsI | TGGCCA | 1 cut(s) | 646 |
| MluCI | AATT | 5 cut(s) | 25, 96, 299, 384, 532 |
| MluNI | TGGCCA | 1 cut(s) | 646 |
| MmeI | TCCRAC | 1 cut(s) | 495 |
| MnlI | CCTC | 7 cut(s) | 26, 102, 124, 200, 276, 413, 424 |
| Mox20I | TGGCCA | 1 cut(s) | 646 |
| MscI | TGGCCA | 1 cut(s) | 646 |
| MseI | TTAA | 3 cut(s) | 243, 368, 685 |
| MslI | CAYNNNNRTG | 1 cut(s) | 273 |
| Msp20I | TGGCCA | 1 cut(s) | 646 |
| MspCI | CTTAAG | 1 cut(s) | 242 |
| MspI | CCGG | 4 cut(s) | 203, 400, 427, 658 |
| MspR9I | CCNGG | 2 cut(s) | 204, 428 |
| MvnI | CGCG | 1 cut(s) | 309 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 176 |
| NciI | CCSGG | 2 cut(s) | 204, 428 |
| NcoI | CCATGG | 1 cut(s) | 335 |
| NdeI | CATATG | 1 cut(s) | 270 |
| NdeII | GATC | 5 cut(s) | 4, 75, 120, 448, 595 |
| NlaIII | CATG | 1 cut(s) | 339 |
| NsbI | TGCGCA | 1 cut(s) | 264 |
| PfeI | GAWTC | 3 cut(s) | 85, 326, 590 |
| PfoI | TCCNGGA | 1 cut(s) | 426 |
| PinAI | ACCGGT | 1 cut(s) | 657 |
| PkrI | GCNGC | 1 cut(s) | 510 |
| Ppu21I | YACGTR | 1 cut(s) | 486 |
| PspPI | GGNCC | 2 cut(s) | 392, 473 |
| PsuI | RGATCY | 2 cut(s) | 4, 448 |
| RseI | CAYNNNNRTG | 1 cut(s) | 273 |
| SaqAI | TTAA | 3 cut(s) | 243, 368, 685 |
| SatI | GCNGC | 1 cut(s) | 509 |
| Sau3AI | GATC | 5 cut(s) | 4, 75, 120, 448, 595 |
| Sau96I | GGNCC | 2 cut(s) | 392, 473 |
| ScrFI | CCNGG | 2 cut(s) | 204, 428 |
| SduI | GDGCHC | 2 cut(s) | 160, 626 |
| SfaNI | GCATC | 5 cut(s) | 37, 45, 265, 274, 583 |
| SinI | GGWCC | 2 cut(s) | 392, 473 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 273 |
| SmlI | CTYRAG | 1 cut(s) | 242 |
| SmoI | CTYRAG | 1 cut(s) | 242 |
| Sse9I | AATT | 5 cut(s) | 25, 96, 299, 384, 532 |
| SsiI | CCGC | 1 cut(s) | 511 |
| SspMI | CTAG | 2 cut(s) | 57, 161 |
| StyD4I | CCNGG | 2 cut(s) | 202, 426 |
| StyI | CCWWGG | 2 cut(s) | 335, 647 |
| TaaI | ACNGT | 3 cut(s) | 374, 392, 628 |
| TaiI | ACGT | 1 cut(s) | 488 |
| TasI | AATT | 5 cut(s) | 25, 96, 299, 384, 532 |
| TfiI | GAWTC | 3 cut(s) | 85, 326, 590 |
| Tru1I | TTAA | 3 cut(s) | 243, 368, 685 |
| Tru9I | TTAA | 3 cut(s) | 243, 368, 685 |
| TseI | GCWGC | 1 cut(s) | 508 |
| TspDTI | ATGAA | 1 cut(s) | 140 |
| Vha464I | CTTAAG | 1 cut(s) | 242 |
| VpaK11BI | GGWCC | 2 cut(s) | 392, 473 |
| XspI | CTAG | 2 cut(s) | 57, 161 |