ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Yos1 | PF08571 | 3 - 77 | 8.1e-26 | Yos1-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 104 |
| AfaI | GTAC | 1 cut(s) | 170 |
| AgeI | ACCGGT | 1 cut(s) | 69 |
| AgsI | TTSAA | 2 cut(s) | 23, 133 |
| AluBI | AGCT | 1 cut(s) | 96 |
| AluI | AGCT | 1 cut(s) | 96 |
| Alw26I | GTCTC | 1 cut(s) | 155 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 172 |
| ApoI | RAATTY | 1 cut(s) | 104 |
| AsiGI | ACCGGT | 1 cut(s) | 69 |
| AspA2I | CCTAGG | 1 cut(s) | 83 |
| AspLEI | GCGC | 1 cut(s) | 82 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| AvaII | GGWCC | 1 cut(s) | 67 |
| AvrII | CCTAGG | 1 cut(s) | 83 |
| BauI | CACGAG | 1 cut(s) | 185 |
| BccI | CCATC | 2 cut(s) | 84, 209 |
| BcoDI | GTCTC | 1 cut(s) | 155 |
| BfaI | CTAG | 2 cut(s) | 50, 84 |
| BlnI | CCTAGG | 1 cut(s) | 83 |
| Bme18I | GGWCC | 1 cut(s) | 67 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmiI | GGNNCC | 1 cut(s) | 74 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 166, 198, 168, 200 |
| BsaI | GGTCTC | 1 cut(s) | 155 |
| BsaJI | CCNNGG | 1 cut(s) | 83 |
| BsaWI | WCCGGW | 1 cut(s) | 69 |
| Bse118I | RCCGGY | 1 cut(s) | 69 |
| BseDI | CCNNGG | 1 cut(s) | 83 |
| BseGI | GGATG | 1 cut(s) | 95 |
| BseMII | CTCAG | 2 cut(s) | 114, 164 |
| BshTI | ACCGGT | 1 cut(s) | 69 |
| BsiSI | CCGG | 1 cut(s) | 70 |
| BslFI | GGGAC | 1 cut(s) | 150 |
| BsmAI | GTCTC | 1 cut(s) | 155 |
| BsmFI | GGGAC | 1 cut(s) | 150 |
| Bso31I | GGTCTC | 1 cut(s) | 155 |
| BspCNI | CTCAG | 2 cut(s) | 113, 165 |
| BspLI | GGNNCC | 1 cut(s) | 74 |
| BspTNI | GGTCTC | 1 cut(s) | 155 |
| BsrFI | RCCGGY | 1 cut(s) | 69 |
| BssAI | RCCGGY | 1 cut(s) | 69 |
| BssECI | CCNNGG | 1 cut(s) | 83 |
| BssSI | CACGAG | 1 cut(s) | 185 |
| BssT1I | CCWWGG | 1 cut(s) | 83 |
| Bst2BI | CACGAG | 1 cut(s) | 185 |
| Bst4CI | ACNGT | 1 cut(s) | 168 |
| BstDEI | CTNAG | 2 cut(s) | 100, 173 |
| BstF5I | GGATG | 1 cut(s) | 95 |
| BstHHI | GCGC | 1 cut(s) | 82 |
| BstMAI | GTCTC | 1 cut(s) | 155 |
| BtsCI | GGATG | 1 cut(s) | 95 |
| CaiI | CAGNNNCTG | 1 cut(s) | 172 |
| CfoI | GCGC | 1 cut(s) | 82 |
| Cfr10I | RCCGGY | 1 cut(s) | 69 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| CseI | GACGC | 1 cut(s) | 22 |
| Csp6I | GTAC | 1 cut(s) | 169 |
| CspAI | ACCGGT | 1 cut(s) | 69 |
| CviJI | RGCY | 2 cut(s) | 27, 96 |
| CviKI_1 | RGCY | 2 cut(s) | 27, 96 |
| CviQI | GTAC | 1 cut(s) | 169 |
| DdeI | CTNAG | 2 cut(s) | 100, 173 |
| Eco130I | CCWWGG | 1 cut(s) | 83 |
| Eco31I | GGTCTC | 1 cut(s) | 155 |
| Eco32I | GATATC | 1 cut(s) | 225 |
| Eco47I | GGWCC | 1 cut(s) | 67 |
| EcoRI | GAATTC | 1 cut(s) | 104 |
| EcoRV | GATATC | 1 cut(s) | 225 |
| EcoT14I | CCWWGG | 1 cut(s) | 83 |
| ErhI | CCWWGG | 1 cut(s) | 83 |
| FaiI | YATR | 2 cut(s) | 146, 159 |
| FaqI | GGGAC | 1 cut(s) | 150 |
| FokI | GGATG | 1 cut(s) | 102 |
| FspBI | CTAG | 2 cut(s) | 50, 84 |
| GlaI | GCGC | 1 cut(s) | 81 |
| HapII | CCGG | 1 cut(s) | 70 |
| HgaI | GACGC | 1 cut(s) | 22 |
| HhaI | GCGC | 1 cut(s) | 82 |
| Hin6I | GCGC | 1 cut(s) | 80 |
| HinP1I | GCGC | 1 cut(s) | 80 |
| HpaII | CCGG | 1 cut(s) | 70 |
| Hpy166II | GTNNAC | 1 cut(s) | 12 |
| Hpy188I | TCNGA | 1 cut(s) | 103 |
| Hpy188III | TCNNGA | 1 cut(s) | 228 |
| Hpy8I | GTNNAC | 1 cut(s) | 12 |
| HpyAV | CCTTC | 2 cut(s) | 17, 127 |
| HpyCH4III | ACNGT | 1 cut(s) | 168 |
| HpyCH4V | TGCA | 3 cut(s) | 41, 161, 207 |
| HpyF3I | CTNAG | 2 cut(s) | 100, 173 |
| HspAI | GCGC | 1 cut(s) | 80 |
| LmnI | GCTCC | 1 cut(s) | 93 |
| LpnPI | CCDG | 5 cut(s) | 44, 83, 103, 185, 213 |
| MaeI | CTAG | 2 cut(s) | 50, 84 |
| MluCI | AATT | 3 cut(s) | 104, 196, 218 |
| MnlI | CCTC | 2 cut(s) | 58, 192 |
| MseI | TTAA | 1 cut(s) | 59 |
| MspI | CCGG | 1 cut(s) | 70 |
| NlaIV | GGNNCC | 1 cut(s) | 74 |
| PflFI | GACNNNGTC | 1 cut(s) | 124 |
| PinAI | ACCGGT | 1 cut(s) | 69 |
| PspN4I | GGNNCC | 1 cut(s) | 74 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| PstNI | CAGNNNCTG | 1 cut(s) | 172 |
| PsyI | GACNNNGTC | 1 cut(s) | 124 |
| RsaI | GTAC | 1 cut(s) | 170 |
| RsaNI | GTAC | 1 cut(s) | 169 |
| SaqAI | TTAA | 1 cut(s) | 59 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| SetI | ASST | 3 cut(s) | 98, 151, 174 |
| SinI | GGWCC | 1 cut(s) | 67 |
| Sse9I | AATT | 3 cut(s) | 104, 196, 218 |
| SspI | AATATT | 1 cut(s) | 57 |
| SspMI | CTAG | 2 cut(s) | 50, 84 |
| StyI | CCWWGG | 1 cut(s) | 83 |
| TaaI | ACNGT | 1 cut(s) | 168 |
| TasI | AATT | 3 cut(s) | 104, 196, 218 |
| Tru1I | TTAA | 1 cut(s) | 59 |
| Tru9I | TTAA | 1 cut(s) | 59 |
| Tth111I | GACNNNGTC | 1 cut(s) | 124 |
| VpaK11BI | GGWCC | 1 cut(s) | 67 |
| XapI | RAATTY | 1 cut(s) | 104 |
| XmaJI | CCTAGG | 1 cut(s) | 83 |
| XspI | CTAG | 2 cut(s) | 50, 84 |