ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 35 |
| AcsI | RAATTY | 1 cut(s) | 271 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 259 |
| AgsI | TTSAA | 1 cut(s) | 298 |
| AjnI | CCWGG | 1 cut(s) | 190 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 124, 197 |
| AoxI | GGCC | 1 cut(s) | 194 |
| ApoI | RAATTY | 1 cut(s) | 271 |
| AspLEI | GCGC | 1 cut(s) | 131 |
| AspS9I | GGNCC | 2 cut(s) | 194, 250 |
| AsuHPI | GGTGA | 2 cut(s) | 247, 257 |
| AsuII | TTCGAA | 1 cut(s) | 154 |
| AvaII | GGWCC | 1 cut(s) | 250 |
| BccI | CCATC | 1 cut(s) | 194 |
| BciT130I | CCWGG | 1 cut(s) | 192 |
| BclI | TGATCA | 1 cut(s) | 12 |
| BfuAI | ACCTGC | 1 cut(s) | 35 |
| Bme1390I | CCNGG | 1 cut(s) | 192 |
| Bme18I | GGWCC | 1 cut(s) | 250 |
| BmgT120I | GGNCC | 2 cut(s) | 194, 250 |
| BmrFI | CCNGG | 1 cut(s) | 192 |
| BmrI | ACTGGG | 1 cut(s) | 241 |
| BmuI | ACTGGG | 1 cut(s) | 241 |
| BpmI | CTGGAG | 1 cut(s) | 174 |
| Bpu14I | TTCGAA | 1 cut(s) | 154 |
| BpuEI | CTTGAG | 1 cut(s) | 101 |
| BsaJI | CCNNGG | 2 cut(s) | 191, 258 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 172, 202 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 259 |
| Bse1I | ACTGG | 1 cut(s) | 236 |
| BseBI | CCWGG | 1 cut(s) | 192 |
| BseDI | CCNNGG | 2 cut(s) | 191, 258 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 259 |
| BseMII | CTCAG | 2 cut(s) | 99, 135 |
| BseNI | ACTGG | 1 cut(s) | 236 |
| BshFI | GGCC | 1 cut(s) | 196 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 259 |
| BsnI | GGCC | 1 cut(s) | 196 |
| Bsp119I | TTCGAA | 1 cut(s) | 154 |
| Bsp143I | GATC | 1 cut(s) | 12 |
| BspANI | GGCC | 1 cut(s) | 196 |
| BspCNI | CTCAG | 2 cut(s) | 100, 136 |
| BspMI | ACCTGC | 1 cut(s) | 35 |
| BspT104I | TTCGAA | 1 cut(s) | 154 |
| BsrI | ACTGG | 1 cut(s) | 236 |
| BssECI | CCNNGG | 2 cut(s) | 191, 258 |
| BssMI | GATC | 1 cut(s) | 12 |
| BssT1I | CCWWGG | 1 cut(s) | 258 |
| Bst2UI | CCWGG | 1 cut(s) | 192 |
| Bst4CI | ACNGT | 1 cut(s) | 126 |
| BstBI | TTCGAA | 1 cut(s) | 154 |
| BstDEI | CTNAG | 3 cut(s) | 30, 108, 144 |
| BstEII | GGTNACC | 1 cut(s) | 47 |
| BstHHI | GCGC | 1 cut(s) | 131 |
| BstKTI | GATC | 1 cut(s) | 15 |
| BstMBI | GATC | 1 cut(s) | 12 |
| BstNI | CCWGG | 1 cut(s) | 192 |
| BstPI | GGTNACC | 1 cut(s) | 47 |
| BstSCI | CCNGG | 1 cut(s) | 190 |
| BsuRI | GGCC | 1 cut(s) | 196 |
| BtsI | GCAGTG | 1 cut(s) | 72 |
| BtsIMutI | CAGTG | 1 cut(s) | 72 |
| BveI | ACCTGC | 1 cut(s) | 35 |
| CaiI | CAGNNNCTG | 2 cut(s) | 124, 197 |
| CfoI | GCGC | 1 cut(s) | 131 |
| Cfr13I | GGNCC | 2 cut(s) | 194, 250 |
| CviJI | RGCY | 1 cut(s) | 196 |
| CviKI_1 | RGCY | 1 cut(s) | 196 |
| DdeI | CTNAG | 3 cut(s) | 30, 108, 144 |
| DpnI | GATC | 1 cut(s) | 14 |
| DpnII | GATC | 1 cut(s) | 12 |
| Eco130I | CCWWGG | 1 cut(s) | 258 |
| Eco47I | GGWCC | 1 cut(s) | 250 |
| Eco91I | GGTNACC | 1 cut(s) | 47 |
| EcoO109I | RGGNCCY | 2 cut(s) | 194, 250 |
| EcoO65I | GGTNACC | 1 cut(s) | 47 |
| EcoRII | CCWGG | 1 cut(s) | 190 |
| EcoT14I | CCWWGG | 1 cut(s) | 258 |
| ErhI | CCWWGG | 1 cut(s) | 258 |
| FbaI | TGATCA | 1 cut(s) | 12 |
| GlaI | GCGC | 1 cut(s) | 130 |
| GsuI | CTGGAG | 1 cut(s) | 174 |
| HaeIII | GGCC | 1 cut(s) | 196 |
| HhaI | GCGC | 1 cut(s) | 131 |
| Hin6I | GCGC | 1 cut(s) | 129 |
| HinP1I | GCGC | 1 cut(s) | 129 |
| HincII | GTYRAC | 1 cut(s) | 290 |
| HindII | GTYRAC | 1 cut(s) | 290 |
| HinfI | GANTC | 1 cut(s) | 103 |
| HphI | GGTGA | 2 cut(s) | 247, 257 |
| Hpy166II | GTNNAC | 1 cut(s) | 290 |
| Hpy188I | TCNGA | 2 cut(s) | 145, 171 |
| Hpy188III | TCNNGA | 2 cut(s) | 80, 107 |
| Hpy8I | GTNNAC | 1 cut(s) | 290 |
| HpyCH4III | ACNGT | 1 cut(s) | 126 |
| HpyF3I | CTNAG | 3 cut(s) | 30, 108, 144 |
| HspAI | GCGC | 1 cut(s) | 129 |
| Ksp22I | TGATCA | 1 cut(s) | 12 |
| Kzo9I | GATC | 1 cut(s) | 12 |
| LmnI | GCTCC | 1 cut(s) | 136 |
| LpnPI | CCDG | 9 cut(s) | 30, 65, 120, 131, 177, 204, 210, 217, 270 |
| MaeIII | GTNAC | 2 cut(s) | 47, 100 |
| MalI | GATC | 1 cut(s) | 14 |
| MboI | GATC | 1 cut(s) | 12 |
| MboII | GAAGA | 2 cut(s) | 132, 269 |
| MluCI | AATT | 2 cut(s) | 156, 271 |
| MlyI | GAGTC | 1 cut(s) | 97 |
| MnlI | CCTC | 4 cut(s) | 76, 139, 241, 263 |
| MseI | TTAA | 1 cut(s) | 267 |
| MspR9I | CCNGG | 1 cut(s) | 192 |
| MvaI | CCWGG | 1 cut(s) | 192 |
| NdeII | GATC | 1 cut(s) | 12 |
| NmuCI | GTSAC | 1 cut(s) | 100 |
| NspV | TTCGAA | 1 cut(s) | 154 |
| PleI | GAGTC | 1 cut(s) | 97 |
| PpsI | GAGTC | 1 cut(s) | 97 |
| PpuMI | RGGWCCY | 1 cut(s) | 250 |
| Psp5II | RGGWCCY | 1 cut(s) | 250 |
| Psp6I | CCWGG | 1 cut(s) | 190 |
| PspEI | GGTNACC | 1 cut(s) | 47 |
| PspGI | CCWGG | 1 cut(s) | 190 |
| PspPI | GGNCC | 2 cut(s) | 194, 250 |
| PspPPI | RGGWCCY | 1 cut(s) | 250 |
| PstNI | CAGNNNCTG | 2 cut(s) | 124, 197 |
| SaqAI | TTAA | 1 cut(s) | 267 |
| Sau3AI | GATC | 1 cut(s) | 12 |
| Sau96I | GGNCC | 2 cut(s) | 194, 250 |
| SchI | GAGTC | 1 cut(s) | 97 |
| ScrFI | CCNGG | 1 cut(s) | 192 |
| SetI | ASST | 5 cut(s) | 49, 54, 97, 255, 260 |
| SfuI | TTCGAA | 1 cut(s) | 154 |
| SinI | GGWCC | 1 cut(s) | 250 |
| SmlI | CTYRAG | 1 cut(s) | 80 |
| SmoI | CTYRAG | 1 cut(s) | 80 |
| Sse9I | AATT | 2 cut(s) | 156, 271 |
| StyD4I | CCNGG | 1 cut(s) | 190 |
| StyI | CCWWGG | 1 cut(s) | 258 |
| TaaI | ACNGT | 1 cut(s) | 126 |
| TaqI | TCGA | 1 cut(s) | 154 |
| TasI | AATT | 2 cut(s) | 156, 271 |
| Tru1I | TTAA | 1 cut(s) | 267 |
| Tru9I | TTAA | 1 cut(s) | 267 |
| TscAI | CASTG | 1 cut(s) | 72 |
| TseFI | GTSAC | 1 cut(s) | 100 |
| Tsp45I | GTSAC | 1 cut(s) | 100 |
| TspDTI | ATGAA | 1 cut(s) | 128 |
| TspRI | CASTG | 1 cut(s) | 72 |
| VpaK11BI | GGWCC | 1 cut(s) | 250 |
| XapI | RAATTY | 1 cut(s) | 271 |