Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 170, 304 |
| AcuI | CTGAAG | 1 cut(s) | 44 |
| AfaI | GTAC | 1 cut(s) | 51 |
| AgsI | TTSAA | 3 cut(s) | 239, 279, 291 |
| AjnI | CCWGG | 1 cut(s) | 191 |
| AluBI | AGCT | 2 cut(s) | 67, 180 |
| AluI | AGCT | 2 cut(s) | 67, 180 |
| ApeKI | GCWGC | 1 cut(s) | 340 |
| AspLEI | GCGC | 2 cut(s) | 58, 340 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 42, 74 |
| BbvI | GCAGC | 1 cut(s) | 327 |
| BccI | CCATC | 2 cut(s) | 212, 278 |
| BciT130I | CCWGG | 1 cut(s) | 193 |
| BciVI | GTATCC | 1 cut(s) | 146 |
| BfoI | RGCGCY | 1 cut(s) | 59 |
| BfuI | GTATCC | 1 cut(s) | 146 |
| BisI | GCNGC | 2 cut(s) | 305, 341 |
| BlsI | GCNGC | 2 cut(s) | 306, 342 |
| Bme1390I | CCNGG | 1 cut(s) | 193 |
| BmrFI | CCNGG | 1 cut(s) | 193 |
| BmsI | GCATC | 2 cut(s) | 262, 334 |
| BsaJI | CCNNGG | 1 cut(s) | 192 |
| Bse1I | ACTGG | 2 cut(s) | 305, 316 |
| BseBI | CCWGG | 1 cut(s) | 193 |
| BseDI | CCNNGG | 1 cut(s) | 192 |
| BseGI | GGATG | 3 cut(s) | 36, 223, 325 |
| BseNI | ACTGG | 2 cut(s) | 305, 316 |
| BseXI | GCAGC | 1 cut(s) | 327 |
| Bsp143I | GATC | 2 cut(s) | 133, 147 |
| BspACI | CCGC | 2 cut(s) | 170, 304 |
| BsrI | ACTGG | 2 cut(s) | 305, 316 |
| BssECI | CCNNGG | 1 cut(s) | 192 |
| BssMI | GATC | 2 cut(s) | 133, 147 |
| Bst2UI | CCWGG | 1 cut(s) | 193 |
| BstC8I | GCNNGC | 1 cut(s) | 201 |
| BstDEI | CTNAG | 2 cut(s) | 99, 243 |
| BstF5I | GGATG | 3 cut(s) | 36, 223, 325 |
| BstH2I | RGCGCY | 1 cut(s) | 59 |
| BstHHI | GCGC | 2 cut(s) | 58, 340 |
| BstKTI | GATC | 2 cut(s) | 136, 150 |
| BstMBI | GATC | 2 cut(s) | 133, 147 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 33, 64 |
| BstNI | CCWGG | 1 cut(s) | 193 |
| BstSCI | CCNGG | 1 cut(s) | 191 |
| BstV1I | GCAGC | 1 cut(s) | 327 |
| BsuI | GTATCC | 1 cut(s) | 146 |
| BtsCI | GGATG | 3 cut(s) | 36, 223, 325 |
| BtsI | GCAGTG | 1 cut(s) | 333 |
| BtsIMutI | CAGTG | 2 cut(s) | 255, 333 |
| Cac8I | GCNNGC | 1 cut(s) | 201 |
| CfoI | GCGC | 2 cut(s) | 58, 340 |
| Csp6I | GTAC | 1 cut(s) | 50 |
| CviAII | CATG | 1 cut(s) | 257 |
| CviJI | RGCY | 5 cut(s) | 14, 67, 180, 199, 307 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 67, 180, 199, 307 |
| CviQI | GTAC | 1 cut(s) | 50 |
| DdeI | CTNAG | 2 cut(s) | 99, 243 |
| DpnI | GATC | 2 cut(s) | 135, 149 |
| DpnII | GATC | 2 cut(s) | 133, 147 |
| Eco57I | CTGAAG | 1 cut(s) | 44 |
| EcoRII | CCWGG | 1 cut(s) | 191 |
| FaeI | CATG | 1 cut(s) | 260 |
| FaiI | YATR | 6 cut(s) | 47, 126, 128, 258, 321, 348 |
| FatI | CATG | 1 cut(s) | 256 |
| Fnu4HI | GCNGC | 2 cut(s) | 305, 341 |
| FokI | GGATG | 3 cut(s) | 43, 230, 312 |
| Fsp4HI | GCNGC | 2 cut(s) | 305, 341 |
| GlaI | GCGC | 2 cut(s) | 57, 339 |
| GluI | GCNGC | 2 cut(s) | 305, 341 |
| HaeII | RGCGCY | 1 cut(s) | 59 |
| HhaI | GCGC | 2 cut(s) | 58, 340 |
| Hin1II | CATG | 1 cut(s) | 260 |
| Hin6I | GCGC | 2 cut(s) | 56, 338 |
| HinP1I | GCGC | 2 cut(s) | 56, 338 |
| HincII | GTYRAC | 1 cut(s) | 262 |
| HindII | GTYRAC | 1 cut(s) | 262 |
| HindIII | AAGCTT | 1 cut(s) | 65 |
| HinfI | GANTC | 1 cut(s) | 271 |
| HpaI | GTTAAC | 1 cut(s) | 262 |
| Hpy166II | GTNNAC | 2 cut(s) | 262, 298 |
| Hpy188I | TCNGA | 3 cut(s) | 63, 115, 152 |
| Hpy188III | TCNNGA | 2 cut(s) | 73, 183 |
| Hpy8I | GTNNAC | 2 cut(s) | 262, 298 |
| HpyAV | CCTTC | 2 cut(s) | 96, 100 |
| HpyCH4IV | ACGT | 3 cut(s) | 139, 228, 264 |
| HpyCH4V | TGCA | 3 cut(s) | 36, 145, 253 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 33, 64 |
| HpyF3I | CTNAG | 2 cut(s) | 99, 243 |
| HpySE526I | ACGT | 3 cut(s) | 139, 228, 264 |
| Hsp92II | CATG | 1 cut(s) | 260 |
| HspAI | GCGC | 2 cut(s) | 56, 338 |
| KspAI | GTTAAC | 1 cut(s) | 262 |
| Kzo9I | GATC | 2 cut(s) | 133, 147 |
| LmnI | GCTCC | 1 cut(s) | 369 |
| LpnPI | CCDG | 8 cut(s) | 13, 38, 86, 168, 178, 205, 286, 297 |
| Lsp1109I | GCAGC | 1 cut(s) | 327 |
| LweI | GCATC | 2 cut(s) | 262, 334 |
| MaeII | ACGT | 3 cut(s) | 139, 228, 264 |
| MalI | GATC | 2 cut(s) | 135, 149 |
| MboI | GATC | 2 cut(s) | 133, 147 |
| MfeI | CAATTG | 1 cut(s) | 160 |
| MluCI | AATT | 1 cut(s) | 160 |
| MmeI | TCCRAC | 1 cut(s) | 353 |
| MnlI | CCTC | 4 cut(s) | 106, 160, 167, 208 |
| MseI | TTAA | 2 cut(s) | 261, 373 |
| MspR9I | CCNGG | 1 cut(s) | 193 |
| MunI | CAATTG | 1 cut(s) | 160 |
| MvaI | CCWGG | 1 cut(s) | 193 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 33, 64 |
| NdeII | GATC | 2 cut(s) | 133, 147 |
| NlaIII | CATG | 1 cut(s) | 260 |
| PfeI | GAWTC | 1 cut(s) | 271 |
| PkrI | GCNGC | 2 cut(s) | 306, 342 |
| Psp6I | CCWGG | 1 cut(s) | 191 |
| PspGI | CCWGG | 1 cut(s) | 191 |
| RsaI | GTAC | 1 cut(s) | 51 |
| RsaNI | GTAC | 1 cut(s) | 50 |
| SaqAI | TTAA | 2 cut(s) | 261, 373 |
| SatI | GCNGC | 2 cut(s) | 305, 341 |
| Sau3AI | GATC | 2 cut(s) | 133, 147 |
| ScrFI | CCNGG | 1 cut(s) | 193 |
| SetI | ASST | 8 cut(s) | 9, 69, 111, 142, 159, 182, 231, 267 |
| SfaNI | GCATC | 2 cut(s) | 262, 334 |
| Sse9I | AATT | 1 cut(s) | 160 |
| SsiI | CCGC | 2 cut(s) | 170, 304 |
| StyD4I | CCNGG | 1 cut(s) | 191 |
| TaiI | ACGT | 3 cut(s) | 142, 231, 267 |
| TasI | AATT | 1 cut(s) | 160 |
| TatI | WGTACW | 1 cut(s) | 49 |
| TauI | GCSGC | 1 cut(s) | 307 |
| TfiI | GAWTC | 1 cut(s) | 271 |
| Tru1I | TTAA | 2 cut(s) | 261, 373 |
| Tru9I | TTAA | 2 cut(s) | 261, 373 |
| TscAI | CASTG | 2 cut(s) | 255, 340 |
| TseI | GCWGC | 1 cut(s) | 340 |
| TspDTI | ATGAA | 3 cut(s) | 17, 78, 119 |
| TspGWI | ACGGA | 1 cut(s) | 356 |
| TspRI | CASTG | 2 cut(s) | 255, 340 |