ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 5, 425 |
| AcsI | RAATTY | 1 cut(s) | 395 |
| AdeI | CACNNNGTG | 1 cut(s) | 317 |
| AfaI | GTAC | 1 cut(s) | 262 |
| AgsI | TTSAA | 2 cut(s) | 394, 485 |
| AjnI | CCWGG | 1 cut(s) | 23 |
| AluBI | AGCT | 2 cut(s) | 33, 498 |
| AluI | AGCT | 2 cut(s) | 33, 498 |
| Alw26I | GTCTC | 1 cut(s) | 367 |
| AlwI | GGATC | 2 cut(s) | 5, 425 |
| ApoI | RAATTY | 1 cut(s) | 395 |
| AspS9I | GGNCC | 1 cut(s) | 21 |
| AsuHPI | GGTGA | 1 cut(s) | 59 |
| AvaII | GGWCC | 1 cut(s) | 21 |
| AxyI | CCTNAGG | 1 cut(s) | 129 |
| BccI | CCATC | 2 cut(s) | 109, 274 |
| BceAI | ACGGC | 1 cut(s) | 155 |
| BciT130I | CCWGG | 1 cut(s) | 25 |
| BclI | TGATCA | 1 cut(s) | 489 |
| BcoDI | GTCTC | 1 cut(s) | 367 |
| BfaI | CTAG | 3 cut(s) | 207, 315, 499 |
| Bme1390I | CCNGG | 1 cut(s) | 25 |
| Bme18I | GGWCC | 1 cut(s) | 21 |
| BmgT120I | GGNCC | 1 cut(s) | 21 |
| BmiI | GGNNCC | 1 cut(s) | 22 |
| BmrFI | CCNGG | 1 cut(s) | 25 |
| BpmI | CTGGAG | 1 cut(s) | 46 |
| BsaI | GGTCTC | 1 cut(s) | 367 |
| BsaJI | CCNNGG | 2 cut(s) | 14, 65 |
| Bse1I | ACTGG | 1 cut(s) | 472 |
| Bse21I | CCTNAGG | 1 cut(s) | 129 |
| BseBI | CCWGG | 1 cut(s) | 25 |
| BseDI | CCNNGG | 2 cut(s) | 14, 65 |
| BseGI | GGATG | 1 cut(s) | 418 |
| BseMII | CTCAG | 2 cut(s) | 120, 336 |
| BseNI | ACTGG | 1 cut(s) | 472 |
| BslFI | GGGAC | 2 cut(s) | 34, 95 |
| BsmAI | GTCTC | 1 cut(s) | 367 |
| BsmFI | GGGAC | 2 cut(s) | 34, 95 |
| Bso31I | GGTCTC | 1 cut(s) | 367 |
| Bsp143I | GATC | 4 cut(s) | 10, 178, 430, 489 |
| Bsp19I | CCATGG | 2 cut(s) | 14, 65 |
| BspCNI | CTCAG | 2 cut(s) | 121, 335 |
| BspLI | GGNNCC | 1 cut(s) | 22 |
| BspPI | GGATC | 2 cut(s) | 5, 425 |
| BspTNI | GGTCTC | 1 cut(s) | 367 |
| BsrI | ACTGG | 1 cut(s) | 472 |
| BssECI | CCNNGG | 2 cut(s) | 14, 65 |
| BssMI | GATC | 4 cut(s) | 10, 178, 430, 489 |
| BssT1I | CCWWGG | 2 cut(s) | 14, 65 |
| Bst2UI | CCWGG | 1 cut(s) | 25 |
| Bst4CI | ACNGT | 1 cut(s) | 176 |
| BstC8I | GCNNGC | 2 cut(s) | 35, 39 |
| BstDEI | CTNAG | 4 cut(s) | 129, 239, 322, 369 |
| BstDSI | CCRYGG | 2 cut(s) | 14, 65 |
| BstF5I | GGATG | 1 cut(s) | 418 |
| BstKTI | GATC | 4 cut(s) | 13, 181, 433, 492 |
| BstMAI | GTCTC | 1 cut(s) | 367 |
| BstMBI | GATC | 4 cut(s) | 10, 178, 430, 489 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 340 |
| BstNI | CCWGG | 1 cut(s) | 25 |
| BstSCI | CCNGG | 1 cut(s) | 23 |
| BstX2I | RGATCY | 1 cut(s) | 10 |
| BstYI | RGATCY | 1 cut(s) | 10 |
| Bsu36I | CCTNAGG | 1 cut(s) | 129 |
| BtgI | CCRYGG | 2 cut(s) | 14, 65 |
| BtgZI | GCGATG | 1 cut(s) | 120 |
| BtsCI | GGATG | 1 cut(s) | 418 |
| Cac8I | GCNNGC | 2 cut(s) | 35, 39 |
| Cfr13I | GGNCC | 1 cut(s) | 21 |
| Csp6I | GTAC | 1 cut(s) | 261 |
| CviAII | CATG | 3 cut(s) | 15, 66, 216 |
| CviJI | RGCY | 6 cut(s) | 33, 124, 171, 212, 254, 498 |
| CviKI_1 | RGCY | 6 cut(s) | 33, 124, 171, 212, 254, 498 |
| CviQI | GTAC | 1 cut(s) | 261 |
| DdeI | CTNAG | 4 cut(s) | 129, 239, 322, 369 |
| DpnI | GATC | 4 cut(s) | 12, 180, 432, 491 |
| DpnII | GATC | 4 cut(s) | 10, 178, 430, 489 |
| DraI | TTTAAA | 1 cut(s) | 400 |
| DraIII | CACNNNGTG | 1 cut(s) | 317 |
| Eco130I | CCWWGG | 2 cut(s) | 14, 65 |
| Eco31I | GGTCTC | 1 cut(s) | 367 |
| Eco47I | GGWCC | 1 cut(s) | 21 |
| Eco81I | CCTNAGG | 1 cut(s) | 129 |
| EcoO109I | RGGNCCY | 1 cut(s) | 21 |
| EcoRII | CCWGG | 1 cut(s) | 23 |
| EcoT14I | CCWWGG | 2 cut(s) | 14, 65 |
| ErhI | CCWWGG | 2 cut(s) | 14, 65 |
| FaeI | CATG | 3 cut(s) | 18, 69, 219 |
| FaqI | GGGAC | 2 cut(s) | 34, 95 |
| FatI | CATG | 3 cut(s) | 14, 65, 215 |
| FbaI | TGATCA | 1 cut(s) | 489 |
| FokI | GGATG | 1 cut(s) | 405 |
| FspBI | CTAG | 3 cut(s) | 207, 315, 499 |
| GsuI | CTGGAG | 1 cut(s) | 46 |
| Hin1II | CATG | 3 cut(s) | 18, 69, 219 |
| HinfI | GANTC | 3 cut(s) | 56, 94, 320 |
| HphI | GGTGA | 1 cut(s) | 59 |
| Hpy166II | GTNNAC | 1 cut(s) | 261 |
| Hpy188I | TCNGA | 3 cut(s) | 229, 325, 494 |
| Hpy188III | TCNNGA | 1 cut(s) | 422 |
| Hpy8I | GTNNAC | 1 cut(s) | 261 |
| HpyCH4III | ACNGT | 1 cut(s) | 176 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 293, 356 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 340 |
| HpyF3I | CTNAG | 4 cut(s) | 129, 239, 322, 369 |
| Hsp92II | CATG | 3 cut(s) | 18, 69, 219 |
| Ksp22I | TGATCA | 1 cut(s) | 489 |
| Kzo9I | GATC | 4 cut(s) | 10, 178, 430, 489 |
| LmnI | GCTCC | 1 cut(s) | 348 |
| LpnPI | CCDG | 8 cut(s) | 10, 23, 37, 141, 142, 185, 435, 453 |
| MaeI | CTAG | 3 cut(s) | 207, 315, 499 |
| MaeIII | GTNAC | 4 cut(s) | 60, 298, 317, 411 |
| MalI | GATC | 4 cut(s) | 12, 180, 432, 491 |
| MboI | GATC | 4 cut(s) | 10, 178, 430, 489 |
| MboII | GAAGA | 2 cut(s) | 124, 146 |
| MflI | RGATCY | 1 cut(s) | 10 |
| MluCI | AATT | 2 cut(s) | 357, 395 |
| MlyI | GAGTC | 1 cut(s) | 314 |
| MnlI | CCTC | 3 cut(s) | 124, 141, 154 |
| MseI | TTAA | 2 cut(s) | 87, 399 |
| MslI | CAYNNNNRTG | 1 cut(s) | 271 |
| MspR9I | CCNGG | 1 cut(s) | 25 |
| MvaI | CCWGG | 1 cut(s) | 25 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 340 |
| NcoI | CCATGG | 2 cut(s) | 14, 65 |
| NdeII | GATC | 4 cut(s) | 10, 178, 430, 489 |
| NlaIII | CATG | 3 cut(s) | 18, 69, 219 |
| NlaIV | GGNNCC | 1 cut(s) | 22 |
| NmuCI | GTSAC | 1 cut(s) | 317 |
| PfeI | GAWTC | 2 cut(s) | 56, 94 |
| PleI | GAGTC | 1 cut(s) | 314 |
| PpsI | GAGTC | 1 cut(s) | 314 |
| PpuMI | RGGWCCY | 1 cut(s) | 21 |
| Psp5II | RGGWCCY | 1 cut(s) | 21 |
| Psp6I | CCWGG | 1 cut(s) | 23 |
| PspGI | CCWGG | 1 cut(s) | 23 |
| PspN4I | GGNNCC | 1 cut(s) | 22 |
| PspPI | GGNCC | 1 cut(s) | 21 |
| PspPPI | RGGWCCY | 1 cut(s) | 21 |
| PsuI | RGATCY | 1 cut(s) | 10 |
| RsaI | GTAC | 1 cut(s) | 262 |
| RsaNI | GTAC | 1 cut(s) | 261 |
| RseI | CAYNNNNRTG | 1 cut(s) | 271 |
| SaqAI | TTAA | 2 cut(s) | 87, 399 |
| Sau3AI | GATC | 4 cut(s) | 10, 178, 430, 489 |
| Sau96I | GGNCC | 1 cut(s) | 21 |
| SchI | GAGTC | 1 cut(s) | 314 |
| ScrFI | CCNGG | 1 cut(s) | 25 |
| SetI | ASST | 9 cut(s) | 26, 35, 49, 130, 245, 316, 370, 392, 500 |
| SinI | GGWCC | 1 cut(s) | 21 |
| SmiI | ATTTAAAT | 1 cut(s) | 400 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 271 |
| Sse9I | AATT | 2 cut(s) | 357, 395 |
| SspMI | CTAG | 3 cut(s) | 207, 315, 499 |
| StyD4I | CCNGG | 1 cut(s) | 23 |
| StyI | CCWWGG | 2 cut(s) | 14, 65 |
| SwaI | ATTTAAAT | 1 cut(s) | 400 |
| TaaI | ACNGT | 1 cut(s) | 176 |
| TasI | AATT | 2 cut(s) | 357, 395 |
| TatI | WGTACW | 1 cut(s) | 260 |
| TfiI | GAWTC | 2 cut(s) | 56, 94 |
| Tru1I | TTAA | 2 cut(s) | 87, 399 |
| Tru9I | TTAA | 2 cut(s) | 87, 399 |
| TseFI | GTSAC | 1 cut(s) | 317 |
| Tsp45I | GTSAC | 1 cut(s) | 317 |
| VpaK11BI | GGWCC | 1 cut(s) | 21 |
| XapI | RAATTY | 1 cut(s) | 395 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 21 |
| XspI | CTAG | 3 cut(s) | 207, 315, 499 |