ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1026 |
| AccB1I | GGYRCC | 1 cut(s) | 1510 |
| AccI | GTMKAC | 2 cut(s) | 640, 1303 |
| AciI | CCGC | 2 cut(s) | 166, 1514 |
| AclWI | GGATC | 3 cut(s) | 157, 1187, 1423 |
| AcsI | RAATTY | 2 cut(s) | 804, 1540 |
| AcuI | CTGAAG | 1 cut(s) | 1000 |
| AcyI | GRCGYC | 1 cut(s) | 433 |
| AfaI | GTAC | 5 cut(s) | 461, 845, 1248, 1411, 1564 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 782, 1523, 1618 |
| AjnI | CCWGG | 1 cut(s) | 1611 |
| AluBI | AGCT | 8 cut(s) | 161, 767, 872, 920, 1121, 1142, 1223, 1553 |
| AluI | AGCT | 8 cut(s) | 161, 767, 872, 920, 1121, 1142, 1223, 1553 |
| Alw21I | GWGCWC | 1 cut(s) | 400 |
| Alw26I | GTCTC | 2 cut(s) | 660, 1348 |
| AlwI | GGATC | 3 cut(s) | 157, 1187, 1423 |
| AoxI | GGCC | 1 cut(s) | 76 |
| ApeKI | GCWGC | 2 cut(s) | 480, 692 |
| ApoI | RAATTY | 2 cut(s) | 804, 1540 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1284 |
| AspLEI | GCGC | 1 cut(s) | 511 |
| AspS9I | GGNCC | 1 cut(s) | 1129 |
| AsuHPI | GGTGA | 4 cut(s) | 197, 277, 971, 1496 |
| AvaII | GGWCC | 1 cut(s) | 1129 |
| BanI | GGYRCC | 1 cut(s) | 1510 |
| BauI | CACGAG | 1 cut(s) | 214 |
| BbsI | GAAGAC | 2 cut(s) | 511, 660 |
| Bbv12I | GWGCWC | 1 cut(s) | 400 |
| BbvI | GCAGC | 2 cut(s) | 467, 679 |
| BccI | CCATC | 9 cut(s) | 68, 140, 199, 302, 823, 942, 1267, 1521, 1541 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 119, 153 |
| BciT130I | CCWGG | 1 cut(s) | 1613 |
| BclI | TGATCA | 1 cut(s) | 1603 |
| BcoDI | GTCTC | 2 cut(s) | 660, 1348 |
| BfaI | CTAG | 4 cut(s) | 80, 840, 1139, 1236 |
| BfmI | CTRYAG | 2 cut(s) | 31, 141 |
| BisI | GCNGC | 4 cut(s) | 167, 481, 693, 1514 |
| BlsI | GCNGC | 4 cut(s) | 168, 482, 694, 1515 |
| Bme1390I | CCNGG | 1 cut(s) | 1613 |
| Bme18I | GGWCC | 1 cut(s) | 1129 |
| BmgT120I | GGNCC | 1 cut(s) | 1129 |
| BmiI | GGNNCC | 1 cut(s) | 1512 |
| BmrFI | CCNGG | 1 cut(s) | 1613 |
| BmsI | GCATC | 2 cut(s) | 206, 1318 |
| BpiI | GAAGAC | 2 cut(s) | 511, 660 |
| BpmI | CTGGAG | 1 cut(s) | 69 |
| BpuEI | CTTGAG | 1 cut(s) | 350 |
| BsaHI | GRCGYC | 1 cut(s) | 433 |
| BsaI | GGTCTC | 1 cut(s) | 1348 |
| BsaJI | CCNNGG | 6 cut(s) | 257, 992, 1007, 1050, 1505, 1611 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 704, 734 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 782, 1523, 1618 |
| Bse1I | ACTGG | 3 cut(s) | 178, 467, 787 |
| Bse3DI | GCAATG | 2 cut(s) | 518, 593 |
| BseBI | CCWGG | 1 cut(s) | 1613 |
| BseDI | CCNNGG | 6 cut(s) | 257, 992, 1007, 1050, 1505, 1611 |
| BseGI | GGATG | 8 cut(s) | 313, 493, 834, 991, 1333, 1356, 1532, 1606 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 782, 1523, 1618 |
| BseMI | GCAATG | 2 cut(s) | 518, 593 |
| BseMII | CTCAG | 1 cut(s) | 1433 |
| BseNI | ACTGG | 3 cut(s) | 178, 467, 787 |
| BseRI | GAGGAG | 1 cut(s) | 870 |
| BseXI | GCAGC | 2 cut(s) | 467, 679 |
| BshFI | GGCC | 1 cut(s) | 78 |
| BshNI | GGYRCC | 1 cut(s) | 1510 |
| BsiHKAI | GWGCWC | 1 cut(s) | 400 |
| BsiSI | CCGG | 1 cut(s) | 1314 |
| BslFI | GGGAC | 3 cut(s) | 938, 955, 1025 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 782, 1523, 1618 |
| BsmAI | GTCTC | 2 cut(s) | 660, 1348 |
| BsmFI | GGGAC | 3 cut(s) | 938, 955, 1025 |
| BsnI | GGCC | 1 cut(s) | 78 |
| Bso31I | GGTCTC | 1 cut(s) | 1348 |
| Bsp1286I | GDGCHC | 1 cut(s) | 400 |
| Bsp143I | GATC | 5 cut(s) | 149, 1192, 1415, 1590, 1603 |
| Bsp19I | CCATGG | 1 cut(s) | 1505 |
| BspACI | CCGC | 2 cut(s) | 166, 1514 |
| BspANI | GGCC | 1 cut(s) | 78 |
| BspCNI | CTCAG | 1 cut(s) | 1432 |
| BspLI | GGNNCC | 1 cut(s) | 1512 |
| BspPI | GGATC | 3 cut(s) | 157, 1187, 1423 |
| BspT107I | GGYRCC | 1 cut(s) | 1510 |
| BspTNI | GGTCTC | 1 cut(s) | 1348 |
| BsrDI | GCAATG | 2 cut(s) | 518, 593 |
| BsrI | ACTGG | 3 cut(s) | 178, 467, 787 |
| BssECI | CCNNGG | 6 cut(s) | 257, 992, 1007, 1050, 1505, 1611 |
| BssMI | GATC | 5 cut(s) | 149, 1192, 1415, 1590, 1603 |
| BssNAI | GTATAC | 1 cut(s) | 1304 |
| BssNI | GRCGYC | 1 cut(s) | 433 |
| BssSI | CACGAG | 1 cut(s) | 214 |
| BssT1I | CCWWGG | 5 cut(s) | 257, 992, 1007, 1050, 1505 |
| Bst1107I | GTATAC | 1 cut(s) | 1304 |
| Bst2BI | CACGAG | 1 cut(s) | 214 |
| Bst2UI | CCWGG | 1 cut(s) | 1613 |
| Bst4CI | ACNGT | 5 cut(s) | 789, 1072, 1285, 1308, 1634 |
| Bst6I | CTCTTC | 3 cut(s) | 1292, 1340, 1397 |
| BstACI | GRCGYC | 1 cut(s) | 433 |
| BstC8I | GCNNGC | 2 cut(s) | 837, 978 |
| BstDEI | CTNAG | 2 cut(s) | 1151, 1419 |
| BstDSI | CCRYGG | 1 cut(s) | 1505 |
| BstEII | GGTNACC | 1 cut(s) | 996 |
| BstF5I | GGATG | 8 cut(s) | 313, 493, 834, 991, 1333, 1356, 1532, 1606 |
| BstHHI | GCGC | 1 cut(s) | 511 |
| BstKTI | GATC | 5 cut(s) | 152, 1195, 1418, 1593, 1606 |
| BstMAI | GTCTC | 2 cut(s) | 660, 1348 |
| BstMBI | GATC | 5 cut(s) | 149, 1192, 1415, 1590, 1603 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 506, 1510 |
| BstNI | CCWGG | 1 cut(s) | 1613 |
| BstNSI | RCATGY | 2 cut(s) | 900, 980 |
| BstPI | GGTNACC | 1 cut(s) | 996 |
| BstSCI | CCNGG | 1 cut(s) | 1611 |
| BstSFI | CTRYAG | 2 cut(s) | 31, 141 |
| BstV1I | GCAGC | 2 cut(s) | 467, 679 |
| BstV2I | GAAGAC | 2 cut(s) | 511, 660 |
| BstX2I | RGATCY | 1 cut(s) | 1415 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 408, 1527 |
| BstYI | RGATCY | 1 cut(s) | 1415 |
| BstZ17I | GTATAC | 1 cut(s) | 1304 |
| BsuRI | GGCC | 1 cut(s) | 78 |
| BtgI | CCRYGG | 1 cut(s) | 1505 |
| BtgZI | GCGATG | 1 cut(s) | 234 |
| BtsCI | GGATG | 8 cut(s) | 313, 493, 834, 991, 1333, 1356, 1532, 1606 |
| BtsI | GCAGTG | 1 cut(s) | 1042 |
| BtsIMutI | CAGTG | 2 cut(s) | 780, 1042 |
| Cac8I | GCNNGC | 2 cut(s) | 837, 978 |
| CfoI | GCGC | 1 cut(s) | 511 |
| Cfr13I | GGNCC | 1 cut(s) | 1129 |
| CseI | GACGC | 4 cut(s) | 229, 422, 505, 1481 |
| Csp6I | GTAC | 5 cut(s) | 460, 844, 1247, 1410, 1563 |
| CviAII | CATG | 8 cut(s) | 119, 473, 897, 977, 981, 1083, 1250, 1506 |
| CviQI | GTAC | 5 cut(s) | 460, 844, 1247, 1410, 1563 |
| DdeI | CTNAG | 2 cut(s) | 1151, 1419 |
| DpnI | GATC | 5 cut(s) | 151, 1194, 1417, 1592, 1605 |
| DpnII | GATC | 5 cut(s) | 149, 1192, 1415, 1590, 1603 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1026 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1026 |
| Eam1104I | CTCTTC | 3 cut(s) | 1292, 1340, 1397 |
| EarI | CTCTTC | 3 cut(s) | 1292, 1340, 1397 |
| Eco130I | CCWWGG | 5 cut(s) | 257, 992, 1007, 1050, 1505 |
| Eco31I | GGTCTC | 1 cut(s) | 1348 |
| Eco32I | GATATC | 1 cut(s) | 11 |
| Eco47I | GGWCC | 1 cut(s) | 1129 |
| Eco57I | CTGAAG | 1 cut(s) | 1000 |
| Eco91I | GGTNACC | 1 cut(s) | 996 |
| EcoO65I | GGTNACC | 1 cut(s) | 996 |
| EcoRII | CCWGG | 1 cut(s) | 1611 |
| EcoRV | GATATC | 1 cut(s) | 11 |
| EcoT14I | CCWWGG | 5 cut(s) | 257, 992, 1007, 1050, 1505 |
| EcoT22I | ATGCAT | 1 cut(s) | 982 |
| ErhI | CCWWGG | 5 cut(s) | 257, 992, 1007, 1050, 1505 |
| FaeI | CATG | 8 cut(s) | 122, 476, 900, 980, 984, 1086, 1253, 1509 |
| FaqI | GGGAC | 3 cut(s) | 938, 955, 1025 |
| FatI | CATG | 8 cut(s) | 118, 472, 896, 976, 980, 1082, 1249, 1505 |
| FauNDI | CATATG | 1 cut(s) | 1045 |
| FbaI | TGATCA | 1 cut(s) | 1603 |
| FblI | GTMKAC | 2 cut(s) | 640, 1303 |
| Fnu4HI | GCNGC | 4 cut(s) | 167, 481, 693, 1514 |
| FokI | GGATG | 8 cut(s) | 320, 500, 841, 998, 1340, 1363, 1539, 1613 |
| Fsp4HI | GCNGC | 4 cut(s) | 167, 481, 693, 1514 |
| FspBI | CTAG | 4 cut(s) | 80, 840, 1139, 1236 |
| GlaI | GCGC | 1 cut(s) | 510 |
| GluI | GCNGC | 4 cut(s) | 167, 481, 693, 1514 |
| GsuI | CTGGAG | 1 cut(s) | 69 |
| HaeIII | GGCC | 1 cut(s) | 78 |
| HapII | CCGG | 1 cut(s) | 1314 |
| HgaI | GACGC | 4 cut(s) | 229, 422, 505, 1481 |
| HhaI | GCGC | 1 cut(s) | 511 |
| Hin1I | GRCGYC | 1 cut(s) | 433 |
| Hin1II | CATG | 8 cut(s) | 122, 476, 900, 980, 984, 1086, 1253, 1509 |
| Hin6I | GCGC | 1 cut(s) | 509 |
| HinP1I | GCGC | 1 cut(s) | 509 |
| HindIII | AAGCTT | 1 cut(s) | 918 |
| HinfI | GANTC | 7 cut(s) | 286, 362, 444, 455, 604, 1253, 1405 |
| HpaII | CCGG | 1 cut(s) | 1314 |
| HphI | GGTGA | 4 cut(s) | 197, 277, 971, 1496 |
| Hpy166II | GTNNAC | 5 cut(s) | 188, 219, 559, 641, 1304 |
| Hpy188I | TCNGA | 4 cut(s) | 609, 1019, 1197, 1422 |
| Hpy8I | GTNNAC | 5 cut(s) | 188, 219, 559, 641, 1304 |
| Hpy99I | CGWCG | 1 cut(s) | 1035 |
| HpyAV | CCTTC | 6 cut(s) | 298, 447, 470, 607, 900, 1070 |
| HpyCH4III | ACNGT | 5 cut(s) | 789, 1072, 1285, 1308, 1634 |
| HpyCH4V | TGCA | 7 cut(s) | 197, 483, 695, 896, 976, 980, 1043 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 506, 1510 |
| HpyF3I | CTNAG | 2 cut(s) | 1151, 1419 |
| Hsp92I | GRCGYC | 1 cut(s) | 433 |
| Hsp92II | CATG | 8 cut(s) | 122, 476, 900, 980, 984, 1086, 1253, 1509 |
| HspAI | GCGC | 1 cut(s) | 509 |
| Ksp22I | TGATCA | 1 cut(s) | 1603 |
| Kzo9I | GATC | 5 cut(s) | 149, 1192, 1415, 1590, 1603 |
| LmnI | GCTCC | 3 cut(s) | 403, 832, 1550 |
| Lsp1109I | GCAGC | 2 cut(s) | 467, 679 |
| LweI | GCATC | 2 cut(s) | 206, 1318 |
| MaeI | CTAG | 4 cut(s) | 80, 840, 1139, 1236 |
| MaeIII | GTNAC | 3 cut(s) | 959, 996, 1625 |
| MalI | GATC | 5 cut(s) | 151, 1194, 1417, 1592, 1605 |
| MboI | GATC | 5 cut(s) | 149, 1192, 1415, 1590, 1603 |
| MboII | GAAGA | 7 cut(s) | 83, 218, 511, 660, 1309, 1357, 1414 |
| MfeI | CAATTG | 2 cut(s) | 16, 647 |
| MflI | RGATCY | 1 cut(s) | 1415 |
| MhlI | GDGCHC | 1 cut(s) | 400 |
| MlyI | GAGTC | 2 cut(s) | 613, 1414 |
| MmeI | TCCRAC | 3 cut(s) | 587, 702, 881 |
| Mph1103I | ATGCAT | 1 cut(s) | 982 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1284 |
| MseI | TTAA | 3 cut(s) | 704, 1025, 1454 |
| MslI | CAYNNNNRTG | 4 cut(s) | 123, 566, 1322, 1586 |
| MspI | CCGG | 1 cut(s) | 1314 |
| MspR9I | CCNGG | 1 cut(s) | 1613 |
| MunI | CAATTG | 2 cut(s) | 16, 647 |
| MvaI | CCWGG | 1 cut(s) | 1613 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 506, 1510 |
| NcoI | CCATGG | 1 cut(s) | 1505 |
| NdeI | CATATG | 1 cut(s) | 1045 |
| NdeII | GATC | 5 cut(s) | 149, 1192, 1415, 1590, 1603 |
| NlaIII | CATG | 8 cut(s) | 122, 476, 900, 980, 984, 1086, 1253, 1509 |
| NlaIV | GGNNCC | 1 cut(s) | 1512 |
| NmuCI | GTSAC | 1 cut(s) | 959 |
| NsiI | ATGCAT | 1 cut(s) | 982 |
| NspI | RCATGY | 2 cut(s) | 900, 980 |
| PaeI | GCATGC | 1 cut(s) | 980 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 279 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1284 |
| PfeI | GAWTC | 5 cut(s) | 286, 362, 444, 455, 1253 |
| PkrI | GCNGC | 4 cut(s) | 168, 482, 694, 1515 |
| PleI | GAGTC | 2 cut(s) | 612, 1413 |
| PpsI | GAGTC | 2 cut(s) | 612, 1413 |
| Psp6I | CCWGG | 1 cut(s) | 1611 |
| PspEI | GGTNACC | 1 cut(s) | 996 |
| PspGI | CCWGG | 1 cut(s) | 1611 |
| PspN4I | GGNNCC | 1 cut(s) | 1512 |
| PspPI | GGNCC | 1 cut(s) | 1129 |
| PsuI | RGATCY | 1 cut(s) | 1415 |
| RsaI | GTAC | 5 cut(s) | 461, 845, 1248, 1411, 1564 |
| RsaNI | GTAC | 5 cut(s) | 460, 844, 1247, 1410, 1563 |
| RseI | CAYNNNNRTG | 4 cut(s) | 123, 566, 1322, 1586 |
| SaqAI | TTAA | 3 cut(s) | 704, 1025, 1454 |
| SatI | GCNGC | 4 cut(s) | 167, 481, 693, 1514 |
| Sau3AI | GATC | 5 cut(s) | 149, 1192, 1415, 1590, 1603 |
| Sau96I | GGNCC | 1 cut(s) | 1129 |
| SchI | GAGTC | 2 cut(s) | 613, 1414 |
| ScrFI | CCNGG | 1 cut(s) | 1613 |
| SduI | GDGCHC | 1 cut(s) | 400 |
| SfaNI | GCATC | 2 cut(s) | 206, 1318 |
| SfcI | CTRYAG | 2 cut(s) | 31, 141 |
| SinI | GGWCC | 1 cut(s) | 1129 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 123, 566, 1322, 1586 |
| SmlI | CTYRAG | 1 cut(s) | 329 |
| SmoI | CTYRAG | 1 cut(s) | 329 |
| SphI | GCATGC | 1 cut(s) | 980 |
| SsiI | CCGC | 2 cut(s) | 166, 1514 |
| SspMI | CTAG | 4 cut(s) | 80, 840, 1139, 1236 |
| StyD4I | CCNGG | 1 cut(s) | 1611 |
| StyI | CCWWGG | 5 cut(s) | 257, 992, 1007, 1050, 1505 |
| TaaI | ACNGT | 5 cut(s) | 789, 1072, 1285, 1308, 1634 |
| TaqI | TCGA | 5 cut(s) | 129, 365, 548, 679, 792 |
| TaqII | GACCGA | 1 cut(s) | 1372 |
| TatI | WGTACW | 1 cut(s) | 1246 |
| TauI | GCSGC | 2 cut(s) | 169, 1516 |
| TfiI | GAWTC | 5 cut(s) | 286, 362, 444, 455, 1253 |
| Tru1I | TTAA | 3 cut(s) | 704, 1025, 1454 |
| Tru9I | TTAA | 3 cut(s) | 704, 1025, 1454 |
| TscAI | CASTG | 2 cut(s) | 787, 1042 |
| TseFI | GTSAC | 1 cut(s) | 959 |
| TseI | GCWGC | 2 cut(s) | 480, 692 |
| Tsp45I | GTSAC | 1 cut(s) | 959 |
| TspDTI | ATGAA | 5 cut(s) | 489, 1257, 1293, 1358, 1376 |
| TspRI | CASTG | 2 cut(s) | 787, 1042 |
| VpaK11BI | GGWCC | 1 cut(s) | 1129 |
| XapI | RAATTY | 2 cut(s) | 804, 1540 |
| XceI | RCATGY | 2 cut(s) | 900, 980 |
| XmiI | GTMKAC | 2 cut(s) | 640, 1303 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1284 |
| XspI | CTAG | 4 cut(s) | 80, 840, 1139, 1236 |
| Zsp2I | ATGCAT | 1 cut(s) | 982 |