Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 291 |
| AccBSI | CCGCTC | 1 cut(s) | 217 |
| AccII | CGCG | 1 cut(s) | 30 |
| AciI | CCGC | 5 cut(s) | 25, 66, 121, 217, 383 |
| AclWI | GGATC | 1 cut(s) | 267 |
| AcoI | YGGCCR | 1 cut(s) | 282 |
| AcsI | RAATTY | 2 cut(s) | 176, 295 |
| AcuI | CTGAAG | 1 cut(s) | 437 |
| AdeI | CACNNNGTG | 1 cut(s) | 291 |
| AfaI | GTAC | 2 cut(s) | 119, 405 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 291, 439 |
| AgsI | TTSAA | 2 cut(s) | 171, 466 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 251, 283 |
| AluBI | AGCT | 2 cut(s) | 155, 462 |
| AluI | AGCT | 2 cut(s) | 155, 462 |
| Alw26I | GTCTC | 1 cut(s) | 296 |
| AlwI | GGATC | 1 cut(s) | 267 |
| AoxI | GGCC | 1 cut(s) | 282 |
| ApeKI | GCWGC | 4 cut(s) | 4, 15, 69, 454 |
| ApoI | RAATTY | 2 cut(s) | 176, 295 |
| AscI | GGCGCGCC | 1 cut(s) | 28 |
| AspLEI | GCGC | 3 cut(s) | 15, 30, 32 |
| AspS9I | GGNCC | 1 cut(s) | 205 |
| AsuC2I | CCSGG | 1 cut(s) | 56 |
| AsuHPI | GGTGA | 1 cut(s) | 50 |
| AsuNHI | GCTAGC | 1 cut(s) | 422 |
| AvaII | GGWCC | 1 cut(s) | 205 |
| BalI | TGGCCA | 1 cut(s) | 284 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 396, 428 |
| BbvI | GCAGC | 3 cut(s) | 2, 81, 466 |
| BccI | CCATC | 1 cut(s) | 346 |
| BcnI | CCSGG | 1 cut(s) | 56 |
| BcoDI | GTCTC | 1 cut(s) | 296 |
| BfaI | CTAG | 3 cut(s) | 263, 317, 423 |
| BfoI | RGCGCY | 1 cut(s) | 16 |
| BisI | GCNGC | 6 cut(s) | 5, 16, 26, 67, 70, 455 |
| BlsI | GCNGC | 6 cut(s) | 6, 17, 27, 68, 71, 456 |
| Bme1390I | CCNGG | 1 cut(s) | 56 |
| Bme18I | GGWCC | 1 cut(s) | 205 |
| BmgT120I | GGNCC | 1 cut(s) | 205 |
| BmiI | GGNNCC | 2 cut(s) | 207, 269 |
| BmrFI | CCNGG | 1 cut(s) | 56 |
| BmsI | GCATC | 1 cut(s) | 218 |
| BmtI | GCTAGC | 1 cut(s) | 426 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 128, 160 |
| BpuMI | CCSGG | 1 cut(s) | 56 |
| BsaJI | CCNNGG | 2 cut(s) | 8, 271 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 293, 323 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 291, 439 |
| BseDI | CCNNGG | 2 cut(s) | 8, 271 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 291, 439 |
| BseMII | CTCAG | 1 cut(s) | 75 |
| BsePI | GCGCGC | 1 cut(s) | 28 |
| BseXI | GCAGC | 3 cut(s) | 2, 81, 466 |
| BsgI | GTGCAG | 1 cut(s) | 316 |
| Bsh1236I | CGCG | 1 cut(s) | 30 |
| BshFI | GGCC | 1 cut(s) | 284 |
| BsiSI | CCGG | 1 cut(s) | 55 |
| BslFI | GGGAC | 2 cut(s) | 71, 191 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 291, 439 |
| BsmAI | GTCTC | 1 cut(s) | 296 |
| BsmBI | CGTCTC | 1 cut(s) | 296 |
| BsmFI | GGGAC | 2 cut(s) | 71, 191 |
| BsnI | GGCC | 1 cut(s) | 284 |
| Bsp143I | GATC | 2 cut(s) | 40, 259 |
| Bsp19I | CCATGG | 1 cut(s) | 271 |
| BspACI | CCGC | 5 cut(s) | 25, 66, 121, 217, 383 |
| BspANI | GGCC | 1 cut(s) | 284 |
| BspCNI | CTCAG | 1 cut(s) | 74 |
| BspFNI | CGCG | 1 cut(s) | 30 |
| BspHI | TCATGA | 1 cut(s) | 133 |
| BspLI | GGNNCC | 2 cut(s) | 207, 269 |
| BspOI | GCTAGC | 1 cut(s) | 426 |
| BspPI | GGATC | 1 cut(s) | 267 |
| BsrBI | CCGCTC | 1 cut(s) | 217 |
| BssECI | CCNNGG | 2 cut(s) | 8, 271 |
| BssHII | GCGCGC | 1 cut(s) | 28 |
| BssMI | GATC | 2 cut(s) | 40, 259 |
| BssT1I | CCWWGG | 2 cut(s) | 8, 271 |
| Bst4CI | ACNGT | 1 cut(s) | 103 |
| BstC8I | GCNNGC | 3 cut(s) | 30, 74, 424 |
| BstDEI | CTNAG | 1 cut(s) | 61 |
| BstDSI | CCRYGG | 1 cut(s) | 271 |
| BstFNI | CGCG | 1 cut(s) | 30 |
| BstH2I | RGCGCY | 1 cut(s) | 16 |
| BstHHI | GCGC | 3 cut(s) | 15, 30, 32 |
| BstKTI | GATC | 2 cut(s) | 43, 262 |
| BstMAI | GTCTC | 1 cut(s) | 296 |
| BstMBI | GATC | 2 cut(s) | 40, 259 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 10, 428, 451 |
| BstSCI | CCNGG | 1 cut(s) | 54 |
| BstUI | CGCG | 1 cut(s) | 30 |
| BstV1I | GCAGC | 3 cut(s) | 2, 81, 466 |
| BstX2I | RGATCY | 1 cut(s) | 259 |
| BstYI | RGATCY | 1 cut(s) | 259 |
| BsuRI | GGCC | 1 cut(s) | 284 |
| BtgI | CCRYGG | 1 cut(s) | 271 |
| Cac8I | GCNNGC | 3 cut(s) | 30, 74, 424 |
| CciI | TCATGA | 1 cut(s) | 133 |
| CfoI | GCGC | 3 cut(s) | 15, 30, 32 |
| Cfr13I | GGNCC | 1 cut(s) | 205 |
| CseI | GACGC | 1 cut(s) | 302 |
| Csp6I | GTAC | 2 cut(s) | 118, 404 |
| CviAII | CATG | 4 cut(s) | 134, 272, 342, 401 |
| CviJI | RGCY | 8 cut(s) | 54, 72, 155, 236, 284, 422, 431, 462 |
| CviKI_1 | RGCY | 8 cut(s) | 54, 72, 155, 236, 284, 422, 431, 462 |
| CviQI | GTAC | 2 cut(s) | 118, 404 |
| DdeI | CTNAG | 1 cut(s) | 61 |
| DpnI | GATC | 2 cut(s) | 42, 261 |
| DpnII | GATC | 2 cut(s) | 40, 259 |
| DraIII | CACNNNGTG | 1 cut(s) | 291 |
| EaeI | YGGCCR | 1 cut(s) | 282 |
| Eco130I | CCWWGG | 2 cut(s) | 8, 271 |
| Eco47I | GGWCC | 1 cut(s) | 205 |
| Eco57I | CTGAAG | 1 cut(s) | 437 |
| EcoRI | GAATTC | 1 cut(s) | 295 |
| EcoT14I | CCWWGG | 2 cut(s) | 8, 271 |
| ErhI | CCWWGG | 2 cut(s) | 8, 271 |
| Esp3I | CGTCTC | 1 cut(s) | 296 |
| FaeI | CATG | 4 cut(s) | 137, 275, 345, 404 |
| FaiI | YATR | 8 cut(s) | 135, 152, 162, 185, 273, 281, 343, 402 |
| FaqI | GGGAC | 2 cut(s) | 71, 191 |
| FatI | CATG | 4 cut(s) | 133, 271, 341, 400 |
| FauI | CCCGC | 1 cut(s) | 390 |
| Fnu4HI | GCNGC | 6 cut(s) | 5, 16, 26, 67, 70, 455 |
| Fsp4HI | GCNGC | 6 cut(s) | 5, 16, 26, 67, 70, 455 |
| FspBI | CTAG | 3 cut(s) | 263, 317, 423 |
| GlaI | GCGC | 3 cut(s) | 14, 29, 31 |
| GluI | GCNGC | 6 cut(s) | 5, 16, 26, 67, 70, 455 |
| HaeII | RGCGCY | 1 cut(s) | 16 |
| HaeIII | GGCC | 1 cut(s) | 284 |
| HapII | CCGG | 1 cut(s) | 55 |
| HgaI | GACGC | 1 cut(s) | 302 |
| HhaI | GCGC | 3 cut(s) | 15, 30, 32 |
| Hin1II | CATG | 4 cut(s) | 137, 275, 345, 404 |
| Hin6I | GCGC | 3 cut(s) | 13, 28, 30 |
| HinP1I | GCGC | 3 cut(s) | 13, 28, 30 |
| HinfI | GANTC | 3 cut(s) | 59, 143, 392 |
| HpaII | CCGG | 1 cut(s) | 55 |
| HphI | GGTGA | 1 cut(s) | 50 |
| Hpy188I | TCNGA | 4 cut(s) | 301, 391, 397, 417 |
| Hpy188III | TCNNGA | 2 cut(s) | 134, 317 |
| HpyAV | CCTTC | 2 cut(s) | 396, 412 |
| HpyCH4III | ACNGT | 1 cut(s) | 103 |
| HpyCH4IV | ACGT | 1 cut(s) | 305 |
| HpyCH4V | TGCA | 1 cut(s) | 333 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 10, 428, 451 |
| HpyF3I | CTNAG | 1 cut(s) | 61 |
| HpySE526I | ACGT | 1 cut(s) | 305 |
| Hsp92II | CATG | 4 cut(s) | 137, 275, 345, 404 |
| HspAI | GCGC | 3 cut(s) | 13, 28, 30 |
| Kzo9I | GATC | 2 cut(s) | 40, 259 |
| LpnPI | CCDG | 8 cut(s) | 29, 46, 48, 68, 86, 109, 188, 422 |
| Lsp1109I | GCAGC | 3 cut(s) | 2, 81, 466 |
| LweI | GCATC | 1 cut(s) | 218 |
| MaeI | CTAG | 3 cut(s) | 263, 317, 423 |
| MaeII | ACGT | 1 cut(s) | 305 |
| MaeIII | GTNAC | 3 cut(s) | 95, 140, 248 |
| MalI | GATC | 2 cut(s) | 42, 261 |
| MbiI | CCGCTC | 1 cut(s) | 217 |
| MboI | GATC | 2 cut(s) | 40, 259 |
| MboII | GAAGA | 1 cut(s) | 207 |
| MflI | RGATCY | 1 cut(s) | 259 |
| MlsI | TGGCCA | 1 cut(s) | 284 |
| MluCI | AATT | 3 cut(s) | 157, 176, 295 |
| MluNI | TGGCCA | 1 cut(s) | 284 |
| MlyI | GAGTC | 2 cut(s) | 53, 137 |
| MnlI | CCTC | 6 cut(s) | 29, 74, 101, 226, 444, 466 |
| Mox20I | TGGCCA | 1 cut(s) | 284 |
| MscI | TGGCCA | 1 cut(s) | 284 |
| MslI | CAYNNNNRTG | 1 cut(s) | 138 |
| Msp20I | TGGCCA | 1 cut(s) | 284 |
| MspA1I | CMGCKG | 1 cut(s) | 123 |
| MspI | CCGG | 1 cut(s) | 55 |
| MspR9I | CCNGG | 1 cut(s) | 56 |
| MvnI | CGCG | 1 cut(s) | 30 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 10, 428, 451 |
| NciI | CCSGG | 1 cut(s) | 56 |
| NcoI | CCATGG | 1 cut(s) | 271 |
| NdeII | GATC | 2 cut(s) | 40, 259 |
| NheI | GCTAGC | 1 cut(s) | 422 |
| NlaIII | CATG | 4 cut(s) | 137, 275, 345, 404 |
| NlaIV | GGNNCC | 2 cut(s) | 207, 269 |
| NmuCI | GTSAC | 3 cut(s) | 95, 140, 248 |
| PagI | TCATGA | 1 cut(s) | 133 |
| PalAI | GGCGCGCC | 1 cut(s) | 28 |
| PauI | GCGCGC | 1 cut(s) | 28 |
| PfeI | GAWTC | 1 cut(s) | 392 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 291 |
| PkrI | GCNGC | 6 cut(s) | 6, 17, 27, 68, 71, 456 |
| PleI | GAGTC | 2 cut(s) | 53, 137 |
| PpsI | GAGTC | 2 cut(s) | 53, 137 |
| PspN4I | GGNNCC | 2 cut(s) | 207, 269 |
| PspPI | GGNCC | 1 cut(s) | 205 |
| PsuI | RGATCY | 1 cut(s) | 259 |
| PteI | GCGCGC | 1 cut(s) | 28 |
| RsaI | GTAC | 2 cut(s) | 119, 405 |
| RsaNI | GTAC | 2 cut(s) | 118, 404 |
| RseI | CAYNNNNRTG | 1 cut(s) | 138 |
| SatI | GCNGC | 6 cut(s) | 5, 16, 26, 67, 70, 455 |
| Sau3AI | GATC | 2 cut(s) | 40, 259 |
| Sau96I | GGNCC | 1 cut(s) | 205 |
| SchI | GAGTC | 2 cut(s) | 53, 137 |
| ScrFI | CCNGG | 1 cut(s) | 56 |
| SetI | ASST | 8 cut(s) | 40, 85, 97, 112, 157, 308, 409, 464 |
| SfaNI | GCATC | 1 cut(s) | 218 |
| SgsI | GGCGCGCC | 1 cut(s) | 28 |
| SinI | GGWCC | 1 cut(s) | 205 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 138 |
| Sse9I | AATT | 3 cut(s) | 157, 176, 295 |
| SsiI | CCGC | 5 cut(s) | 25, 66, 121, 217, 383 |
| SspMI | CTAG | 3 cut(s) | 263, 317, 423 |
| StyD4I | CCNGG | 1 cut(s) | 54 |
| StyI | CCWWGG | 2 cut(s) | 8, 271 |
| TaaI | ACNGT | 1 cut(s) | 103 |
| TaiI | ACGT | 1 cut(s) | 308 |
| TasI | AATT | 3 cut(s) | 157, 176, 295 |
| TauI | GCSGC | 2 cut(s) | 28, 69 |
| TfiI | GAWTC | 1 cut(s) | 392 |
| TseFI | GTSAC | 3 cut(s) | 95, 140, 248 |
| TseI | GCWGC | 4 cut(s) | 4, 15, 69, 454 |
| Tsp45I | GTSAC | 3 cut(s) | 95, 140, 248 |
| TspDTI | ATGAA | 1 cut(s) | 365 |
| TspGWI | ACGGA | 1 cut(s) | 79 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 291 |
| VpaK11BI | GGWCC | 1 cut(s) | 205 |
| XapI | RAATTY | 2 cut(s) | 176, 295 |
| XbaI | TCTAGA | 1 cut(s) | 316 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 40 |
| XspI | CTAG | 3 cut(s) | 263, 317, 423 |