Rorug07G0085100

deSI-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000136
Physical Location & Seq
Forward (+)
6689451 .. 6693042
3592 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0085100.1

Sequence Viewer

Length: 1383 bp
ATGCCTTCGTTCGGCTTCTATAACTCTTTTGATGCTCCAAAGCCGGTTTTTGAAACCAAAACAGGCTCTGGATGGAGTCCTTTTGGCACTACCACAACCCCGGCTTTCGGCACTACCAGTTGCCCGGCTTTTGCCACTAGTAACCCAGCTTTTGACTTTACCACCGTTTTTGGCGCCCCGGTTTTCAACACTGCTAGCACTCCAGGTTTTGGCACTAATTGTACCACCACTTTGGCCACTACAGGTACCCTGGCTTTTGGCACTACTAGTACCCCAACTATTGGCACCACGATCACCATAACCCCTGGTGTAGGCACTTCTACTGCTTCAACTGGTGGCACTAATTCCATCGCCATAACCTCTAGTGTTGGTACTGCTAGTACTCCAACTGTTGGCAATAGTATCACCATAGCCCCATCTGTTGGCGCTACTGTCACCATAGCCCCAGCTTCGGGTACTAGTATCACCATAACCCAAGCTGCGGGAACTACTATCACCATAACCAGCAACCCAACTTATGGTGCTACAAGCACCCCAGGCATTGGTGGTGCAAGTACTCCATCCTTTTGCTTTCCAACATCCACTGCTCCTACAAGTGCCCCAGGCTTTTTTACTAATTCTTTTAGCTTTCCAACATCCACTACTTCTACTTTTGCGCAATCAACTTGCACCTCTTGCAGCAGCCAAGTTGGTGCTTCATCTCCTTTTGGACCGCGGAGATCTCCATTTGGAGCTCAGTTGACACCAATAGTTGGGAACAATGCCTCTAGGCAGTCAGCTTTTAGGGGCCACCAGGGGCAGGGAAGTAGAGTGGTTCCTTACACAGCATCTGTTGAAATAGATAGTAATGGTGCTGGTCGTATGAAGTCAATATCAGCAATGCCAATTCATGAGCATAAATGTCACGAGGAACTGAGATGGGAAGATTATCAATTGGGGGATAAAGGTGGAGTGGTTCCTCCTGGTGGGAGTGGCTTCAGCTGCCAGTTTACCACACAGCCATTTCTTCAGAAAGAAAAACCCACTTCCTTTGGGCCGTATGGAAGTCCATGTGCTCACACATCCTCAAGTACTTCTAATATCTCAACTTCATCTCCATTTGGTCAACCATCTTCAAGTCCATTTGGTCAACCATCTTCAAATCCATTTGGTCGAACATCTTCAAGTCCATTTGCTCGACCATCTTCAAGTCCATTTGCTCAAACCCTCAGTTCATCAATTTCGGGGAATTCCAATCTTTTTACACCTTCATCAATTGGGCAAACTTCATCTCCACACCCCTCTTGGTGCATGCCTTCCCAAGTGTCTCAGCCGGTTCAGACTGGTACTCCTCTCTTCAACAGAAATCAAACAAACACAGCAGGTTCCTTGTCTATCTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C97

Protein Analysis

460

Amino Acids

46.71

Weight (kDa)

8.76

Isoelectric Point (pI)

54.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000136)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g28181 FvH4_1g28182 FvH4_1g28940 FvH4_1g29801 FvH4_1g29802 FvH4_3g03321 FvH4_3g12341 FvH4_3g22002 FvH4_3g22003 FvH4_3g22852 FvH4_3g22860 FvH4_3g32806 FvH4_4g02410 FvH4_4g08110 FvH4_4g09791 FvH4_4g09792 FvH4_4g09830 FvH4_4g09831 FvH4_4g09832 FvH4_4g23330 FvH4_5g25220 FvH4_5g30160 FvH4_5g32340 FvH4_5g37421 FvH4_6g21851 FvH4_6g21852 FvH4_6g22855 FvH4_6g22870 FvH4_6g30440 FvH4_6g30962 FvH4_6g37930
malus_domestica MD16G1158000.v1.1
prunus_persica Prupe.1G266000_v2.0.a1 Prupe.1G266100_v2.0.a1 Prupe.1G266200_v2.0.a1 Prupe.2G006600_v2.0.a1 Prupe.2G110300_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0322121 RchiOBHm_Chr1g0322131 RchiOBHm_Chr1g0341871 RchiOBHm_Chr1g0346721 RchiOBHm_Chr2g0118081 RchiOBHm_Chr2g0138651 RchiOBHm_Chr3g0468651 RchiOBHm_Chr3g0475981 RchiOBHm_Chr4g0416921 RchiOBHm_Chr5g0068021 RchiOBHm_Chr6g0273901 RchiOBHm_Chr6g0278661 RchiOBHm_Chr6g0281481 RchiOBHm_Chr6g0306081 RchiOBHm_Chr6g0306091 RchiOBHm_Chr7g0220731 RchiOBHm_Chr7g0220741 RchiOBHm_Chr7g0222641 RchiOBHm_Chr7g0225401 RchiOBHm_Chr7g0230481
rosa_laevigata RLG00000001569 RLG00000006184 RLG00000007906 RLG00000009863 RLG00000011359 RLG00000016125 RLG00000018543 RLG00000020693 RLG00000029658 RLG00000029716
rosa_multiflora Rmu_co8244591.1_g000001 Rmu_co8396391.1_g000001 Rmu_sc0000120.1_g000013 Rmu_sc0000239.1_g000047 Rmu_sc0000252.1_g000019 Rmu_sc0000322.1_g000037 Rmu_sc0000376.1_g000010 Rmu_sc0000435.1_g000033 Rmu_sc0001872.1_g000001 Rmu_sc0001992.1_g000011 Rmu_sc0001992.1_g000012 Rmu_sc0002231.1_g000010 Rmu_sc0002372.1_g000033 Rmu_sc0002705.1_g000012 Rmu_sc0003435.1_g000015 Rmu_sc0004084.1_g000042 Rmu_sc0004084.1_g000043 Rmu_sc0004755.1_g000011 Rmu_sc0005391.1_g000010 Rmu_sc0005970.1_g000001 Rmu_sc0006163.1_g000003 Rmu_sc0006422.1_g000004 Rmu_sc0006422.1_g000005 Rmu_sc0006952.1_g000002 Rmu_sc0010937.1_g000007 Rmu_sc0012130.1_g000008 Rmu_sc0024120.1_g000001 Rmu_sc0035618.1_g000001
rosa_roxburghii Rroxscaffold_1G00039230 Rroxscaffold_2G00085900 Rroxscaffold_2G00085910 Rroxscaffold_2G00125240 Rroxscaffold_2G00126850 Rroxscaffold_2G00150980 Rroxscaffold_3G00230580 Rroxscaffold_3G00245050 Rroxscaffold_4G00320680 Rroxscaffold_4G00328800 Rroxscaffold_5G00349640 Rroxscaffold_6G00406600 Rroxscaffold_7G00165570 Rroxscaffold_7G00191490 Rroxscaffold_7G00192700 Rroxscaffold_7G00192710 Rroxscaffold_7G00201190 Rroxscaffold_7G00201620
rosa_rugosa Rorug01G0033100 Rorug01G0089100 Rorug01G0102000 Rorug01G0353100 Rorug01G0353200 Rorug01G0353300 Rorug02G0276900 Rorug02G0362200 Rorug02G0445100 Rorug02G0627600 Rorug02G0627600 Rorug02G0627600 Rorug03G0267700 Rorug03G0267800 Rorug03G0327400 Rorug04G0004500 Rorug04G0006700 Rorug04G0061500 Rorug04G0064700 Rorug04G0073300 Rorug04G0094300 Rorug04G0181200 Rorug04G0181200 Rorug04G0330100 Rorug05G0035600 Rorug05G0038600 Rorug05G0201600 Rorug05G0367700 Rorug05G0407600 Rorug05G0407700 Rorug05G0543400 Rorug06G0012200 Rorug06G0363700.1 Rorug07G0085100
rosa_samantha Rh1AG049700 Rh1AG182700 Rh1AG182800 Rh1BG015500 Rh1BG398700 Rh1BG409100 Rh1CG074100 Rh1CG169200 Rh1CG169300 Rh1CG169400 Rh1DG130800 Rh1DG130900 Rh1DG440400 Rh2DG440900 Rh3AG144700 Rh3BG167100 Rh3DG366800 Rh4AG214400 Rh4BG189700 Rh4BG189800 Rh4CG268600 Rh4DG004400 Rh4DG147900 Rh4DG248300 Rh5AG053900 Rh5AG054000 Rh5AG317200 Rh5AG326400 Rh5AG332600 Rh5AG419700 Rh5CG284900 Rh5CG288600 Rh6AG252700 Rh6AG252800 Rh6AG256900 Rh6AG257000 Rh6AG257500 Rh6BG175300 Rh6DG226200 Rh6DG264500 Rh7AG374000 Rh7AG398100 Rh7BG274900 Rh7BG300500 Rh7BG308200 Rh7BG451200
rosa_wichuraiana Rw1G015860 Rw1G022160 Rw3G016160 Rw3G021170 Rw4G006020 Rw4G008740 Rw5G027400 Rw5G031840 Rw5G036940 Rw6G008320 Rw6G030330 Rw7G033450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 657
Acc36I ACCTGC 1 cut(s) 1352
Acc65I GGTACC 1 cut(s) 245
AccB1I GGYRCC 3 cut(s) 173, 245, 284
AccB7I CCANNNNNTGG 7 cut(s) 209, 281, 392, 422, 518, 542, 752
AccII CGCG 1 cut(s) 715
AciI CCGC 3 cut(s) 482, 713, 715
AcoI YGGCCR 1 cut(s) 234
AcsI RAATTY 1 cut(s) 1228
AcuI CTGAAG 2 cut(s) 961, 992
AcyI GRCGYC 1 cut(s) 174
AfaI GTAC 9 cut(s) 223, 247, 271, 373, 382, 457, 556, 1072, 1327
AgsI TTSAA 9 cut(s) 53, 187, 330, 836, 1116, 1140, 1164, 1188, 1339
AhlI ACTAGT 3 cut(s) 137, 266, 458
AjnI CCWGG 7 cut(s) 202, 249, 304, 535, 601, 792, 961
AluBI AGCT 7 cut(s) 149, 449, 479, 627, 734, 779, 981
AluI AGCT 7 cut(s) 149, 449, 479, 627, 734, 779, 981
Alw21I GWGCWC 2 cut(s) 736, 1057
Alw26I GTCTC 1 cut(s) 1311
AlwNI CAGNNNCTG 2 cut(s) 68, 830
AoxI GGCC 3 cut(s) 234, 787, 1034
ApeKI GCWGC 4 cut(s) 479, 678, 681, 981
ApoI RAATTY 1 cut(s) 1228
Asp700I GAANNNNTTC 1 cut(s) 1159
Asp718I GGTACC 1 cut(s) 245
AspLEI GCGC 3 cut(s) 176, 428, 658
AspS9I GGNCC 3 cut(s) 710, 787, 1034
AsuC2I CCSGG 3 cut(s) 101, 125, 179
AsuHPI GGTGA 5 cut(s) 286, 397, 427, 457, 487
AsuNHI GCTAGC 1 cut(s) 194
AvaII GGWCC 1 cut(s) 710
BaeGI GKGCMC 1 cut(s) 601
BalI TGGCCA 1 cut(s) 236
BanI GGYRCC 3 cut(s) 173, 245, 284
BanII GRGCYC 1 cut(s) 736
BauI CACGAG 1 cut(s) 905
Bbv12I GWGCWC 2 cut(s) 736, 1057
BbvI GCAGC 4 cut(s) 466, 690, 693, 968
BccI CCATC 8 cut(s) 66, 356, 424, 568, 912, 1117, 1141, 1189
BceAI ACGGC 1 cut(s) 1021
BciT130I CCWGG 7 cut(s) 204, 251, 306, 537, 603, 794, 963
BcnI CCSGG 3 cut(s) 101, 125, 179
BcoDI GTCTC 1 cut(s) 1311
BcuI ACTAGT 3 cut(s) 137, 266, 458
BfaI CTAG 8 cut(s) 138, 195, 267, 363, 378, 459, 768, 1381
BfmI CTRYAG 1 cut(s) 240
BfoI RGCGCY 2 cut(s) 177, 429
BfuAI ACCTGC 1 cut(s) 1352
BglII AGATCT 1 cut(s) 719
BisI GCNGC 4 cut(s) 480, 679, 682, 982
BlsI GCNGC 4 cut(s) 481, 680, 683, 983
BmcAI AGTACT 3 cut(s) 382, 556, 1072
Bme18I GGWCC 1 cut(s) 710
BmgT120I GGNCC 3 cut(s) 710, 787, 1034
BmiI GGNNCC 7 cut(s) 175, 247, 286, 788, 816, 957, 1366
BmsI GCATC 2 cut(s) 22, 836
BmtI GCTAGC 1 cut(s) 198
BpmI CTGGAG 1 cut(s) 186
BpuEI CTTGAG 1 cut(s) 1051
BpuMI CCSGG 3 cut(s) 101, 125, 179
BsaHI GRCGYC 1 cut(s) 174
BsaJI CCNNGG 8 cut(s) 99, 177, 249, 304, 535, 601, 713, 793
BsaXI ACNNNNNCTCC 6 cut(s) 1078, 1108, 1255, 1285, 1312, 1342
Bse118I RCCGGY 2 cut(s) 43, 1312
Bse1I ACTGG 4 cut(s) 117, 337, 985, 1327
Bse3DI GCAATG 1 cut(s) 885
BseBI CCWGG 7 cut(s) 204, 251, 306, 537, 603, 794, 963
BseDI CCNNGG 8 cut(s) 99, 177, 249, 304, 535, 601, 713, 793
BseGI GGATG 5 cut(s) 77, 560, 578, 635, 1061
BseMI GCAATG 1 cut(s) 885
BseMII CTCAG 4 cut(s) 749, 905, 1222, 1322
BseNI ACTGG 4 cut(s) 117, 337, 985, 1327
BseRI GAGGAG 1 cut(s) 1320
BseSI GKGCMC 1 cut(s) 601
BseXI GCAGC 4 cut(s) 466, 690, 693, 968
BseYI CCCAGC 2 cut(s) 145, 445
Bsh1236I CGCG 1 cut(s) 715
BshFI GGCC 3 cut(s) 236, 789, 1036
BshNI GGYRCC 3 cut(s) 173, 245, 284
BsiHKAI GWGCWC 2 cut(s) 736, 1057
BsiSI CCGG 5 cut(s) 44, 101, 125, 179, 1313
BsmAI GTCTC 1 cut(s) 1311
BsnI GGCC 3 cut(s) 236, 789, 1036
Bsp1286I GDGCHC 3 cut(s) 601, 736, 1057
Bsp143I GATC 2 cut(s) 291, 719
BspACI CCGC 3 cut(s) 482, 713, 715
BspANI GGCC 3 cut(s) 236, 789, 1036
BspCNI CTCAG 4 cut(s) 748, 906, 1221, 1321
BspFNI CGCG 1 cut(s) 715
BspHI TCATGA 1 cut(s) 889
BspLI GGNNCC 7 cut(s) 175, 247, 286, 788, 816, 957, 1366
BspMI ACCTGC 1 cut(s) 1352
BspOI GCTAGC 1 cut(s) 198
BspT107I GGYRCC 3 cut(s) 173, 245, 284
BsrDI GCAATG 1 cut(s) 885
BsrFI RCCGGY 2 cut(s) 43, 1312
BsrI ACTGG 4 cut(s) 117, 337, 985, 1327
BssAI RCCGGY 2 cut(s) 43, 1312
BssECI CCNNGG 8 cut(s) 99, 177, 249, 304, 535, 601, 713, 793
BssMI GATC 2 cut(s) 291, 719
BssNI GRCGYC 1 cut(s) 174
BssSI CACGAG 1 cut(s) 905
Bst2BI CACGAG 1 cut(s) 905
Bst2UI CCWGG 7 cut(s) 204, 251, 306, 537, 603, 794, 963
Bst4CI ACNGT 3 cut(s) 166, 391, 433
Bst6I CTCTTC 1 cut(s) 1340
BstACI GRCGYC 1 cut(s) 174
BstAPI GCANNNNNTGC 1 cut(s) 675
BstC8I GCNNGC 2 cut(s) 196, 1292
BstDEI CTNAG 4 cut(s) 735, 914, 1208, 1308
BstDSI CCRYGG 1 cut(s) 713
BstENI CCTNNNNNAGG 1 cut(s) 309
BstF5I GGATG 5 cut(s) 77, 560, 578, 635, 1061
BstFNI CGCG 1 cut(s) 715
BstH2I RGCGCY 2 cut(s) 177, 429
BstHHI GCGC 3 cut(s) 176, 428, 658
BstKTI GATC 2 cut(s) 294, 722
BstMAI GTCTC 1 cut(s) 1311
BstMBI GATC 2 cut(s) 291, 719
BstMWI GCNNNNNNNGC 3 cut(s) 537, 675, 981
BstNI CCWGG 7 cut(s) 204, 251, 306, 537, 603, 794, 963
BstNSI RCATGY 1 cut(s) 1294
BstSFI CTRYAG 1 cut(s) 240
BstSLI GKGCMC 1 cut(s) 601
BstUI CGCG 1 cut(s) 715
BstV1I GCAGC 4 cut(s) 466, 690, 693, 968
BstX2I RGATCY 1 cut(s) 719
BstXI CCANNNNNNTGG 1 cut(s) 232
BstYI RGATCY 1 cut(s) 719
BsuRI GGCC 3 cut(s) 236, 789, 1036
BtgI CCRYGG 1 cut(s) 713
BtgZI GCGATG 1 cut(s) 334
BtsCI GGATG 5 cut(s) 77, 560, 578, 635, 1061
BtsI GCAGTG 2 cut(s) 189, 582
BtsIMutI CAGTG 2 cut(s) 189, 582
BveI ACCTGC 1 cut(s) 1352
Cac8I GCNNGC 2 cut(s) 196, 1292
CaiI CAGNNNCTG 2 cut(s) 68, 830
CciI TCATGA 1 cut(s) 889
CfoI GCGC 3 cut(s) 176, 428, 658
Cfr10I RCCGGY 2 cut(s) 43, 1312
Cfr13I GGNCC 3 cut(s) 710, 787, 1034
Cfr42I CCGCGG 1 cut(s) 716
Csp6I GTAC 9 cut(s) 222, 246, 270, 372, 381, 456, 555, 1071, 1326
CspCI CAANNNNNGTGG 4 cut(s) 151, 186, 1012, 1047
CviAII CATG 3 cut(s) 890, 1050, 1291
CviQI GTAC 9 cut(s) 222, 246, 270, 372, 381, 456, 555, 1071, 1326
DdeI CTNAG 4 cut(s) 735, 914, 1208, 1308
DinI GGCGCC 1 cut(s) 175
DpnI GATC 2 cut(s) 293, 721
DpnII GATC 2 cut(s) 291, 719
EaeI YGGCCR 1 cut(s) 234
Eam1104I CTCTTC 1 cut(s) 1340
EarI CTCTTC 1 cut(s) 1340
Ecl136II GAGCTC 1 cut(s) 734
Eco24I GRGCYC 1 cut(s) 736
Eco47I GGWCC 1 cut(s) 710
Eco53kI GAGCTC 1 cut(s) 734
Eco57I CTGAAG 2 cut(s) 961, 992
EcoICRI GAGCTC 1 cut(s) 734
EcoNI CCTNNNNNAGG 1 cut(s) 309
EcoRI GAATTC 1 cut(s) 1228
EcoRII CCWGG 7 cut(s) 202, 249, 304, 535, 601, 792, 961
EcoT38I GRGCYC 1 cut(s) 736
EgeI GGCGCC 1 cut(s) 175
EheI GGCGCC 1 cut(s) 175
FaeI CATG 3 cut(s) 893, 1053, 1294
FatI CATG 3 cut(s) 889, 1049, 1290
FauI CCCGC 1 cut(s) 475
Fnu4HI GCNGC 4 cut(s) 480, 679, 682, 982
FokI GGATG 5 cut(s) 84, 547, 565, 622, 1048
FriOI GRGCYC 1 cut(s) 736
Fsp4HI GCNGC 4 cut(s) 480, 679, 682, 982
FspBI CTAG 8 cut(s) 138, 195, 267, 363, 378, 459, 768, 1381
FspI TGCGCA 1 cut(s) 657
GlaI GCGC 3 cut(s) 175, 427, 657
GluI GCNGC 4 cut(s) 480, 679, 682, 982
GsaI CCCAGC 2 cut(s) 149, 449
GsuI CTGGAG 1 cut(s) 186
HaeII RGCGCY 2 cut(s) 177, 429
HaeIII GGCC 3 cut(s) 236, 789, 1036
HapII CCGG 5 cut(s) 44, 101, 125, 179, 1313
HhaI GCGC 3 cut(s) 176, 428, 658
Hin1I GRCGYC 1 cut(s) 174
Hin1II CATG 3 cut(s) 893, 1053, 1294
Hin6I GCGC 3 cut(s) 174, 426, 656
HinP1I GCGC 3 cut(s) 174, 426, 656
HincII GTYRAC 3 cut(s) 741, 1106, 1130
HindII GTYRAC 3 cut(s) 741, 1106, 1130
HinfI GANTC 1 cut(s) 76
HpaII CCGG 5 cut(s) 44, 101, 125, 179, 1313
HphI GGTGA 5 cut(s) 286, 397, 427, 457, 487
Hpy166II GTNNAC 4 cut(s) 741, 990, 1106, 1130
Hpy188I TCNGA 2 cut(s) 1011, 1320
Hpy188III TCNNGA 3 cut(s) 69, 890, 905
Hpy8I GTNNAC 4 cut(s) 741, 990, 1106, 1130
HpyAV CCTTC 3 cut(s) 15, 1257, 1305
HpyCH4III ACNGT 3 cut(s) 166, 391, 433
HpyCH4V TGCA 4 cut(s) 551, 669, 678, 1290
HpyF10VI GCNNNNNNNGC 3 cut(s) 537, 675, 981
HpyF3I CTNAG 4 cut(s) 735, 914, 1208, 1308
Hsp92I GRCGYC 1 cut(s) 174
Hsp92II CATG 3 cut(s) 893, 1053, 1294
HspAI GCGC 3 cut(s) 174, 426, 656
KasI GGCGCC 1 cut(s) 173
KpnI GGTACC 1 cut(s) 249
KspI CCGCGG 1 cut(s) 716
Kzo9I GATC 2 cut(s) 291, 719
LmnI GCTCC 3 cut(s) 40, 592, 731
Lsp1109I GCAGC 4 cut(s) 466, 690, 693, 968
LweI GCATC 2 cut(s) 22, 836
MaeI CTAG 8 cut(s) 138, 195, 267, 363, 378, 459, 768, 1381
MaeIII GTNAC 3 cut(s) 140, 433, 902
MalI GATC 2 cut(s) 293, 721
MboI GATC 2 cut(s) 291, 719
MboII GAAGA 7 cut(s) 935, 998, 1104, 1128, 1152, 1176, 1327
MfeI CAATTG 2 cut(s) 932, 1254
MflI RGATCY 1 cut(s) 719
MhlI GDGCHC 3 cut(s) 601, 736, 1057
MlsI TGGCCA 1 cut(s) 236
MluCI AATT 8 cut(s) 217, 343, 616, 885, 932, 1218, 1228, 1254
MluNI TGGCCA 1 cut(s) 236
Mly113I GGCGCC 1 cut(s) 174
MlyI GAGTC 1 cut(s) 85
MmeI TCCRAC 3 cut(s) 410, 599, 656
MnlI CCTC 9 cut(s) 370, 682, 775, 901, 969, 1075, 1217, 1291, 1341
Mox20I TGGCCA 1 cut(s) 236
MroXI GAANNNNTTC 1 cut(s) 1159
MscI TGGCCA 1 cut(s) 236
Msp20I TGGCCA 1 cut(s) 236
MspA1I CMGCKG 2 cut(s) 715, 981
MspI CCGG 5 cut(s) 44, 101, 125, 179, 1313
MunI CAATTG 2 cut(s) 932, 1254
MvaI CCWGG 7 cut(s) 204, 251, 306, 537, 603, 794, 963
MvnI CGCG 1 cut(s) 715
MwoI GCNNNNNNNGC 3 cut(s) 537, 675, 981
NarI GGCGCC 1 cut(s) 174
NciI CCSGG 3 cut(s) 101, 125, 179
NdeII GATC 2 cut(s) 291, 719
NheI GCTAGC 1 cut(s) 194
NlaIII CATG 3 cut(s) 893, 1053, 1294
NlaIV GGNNCC 7 cut(s) 175, 247, 286, 788, 816, 957, 1366
NmuCI GTSAC 2 cut(s) 433, 902
NsbI TGCGCA 1 cut(s) 657
NspI RCATGY 1 cut(s) 1294
PaeI GCATGC 1 cut(s) 1294
PagI TCATGA 1 cut(s) 889
PdmI GAANNNNTTC 1 cut(s) 1159
PflMI CCANNNNNTGG 7 cut(s) 209, 281, 392, 422, 518, 542, 752
PkrI GCNGC 4 cut(s) 481, 680, 683, 983
PleI GAGTC 1 cut(s) 84
PluTI GGCGCC 1 cut(s) 177
PpsI GAGTC 1 cut(s) 84
Psp124BI GAGCTC 1 cut(s) 736
Psp6I CCWGG 7 cut(s) 202, 249, 304, 535, 601, 792, 961
PspFI CCCAGC 2 cut(s) 145, 445
PspGI CCWGG 7 cut(s) 202, 249, 304, 535, 601, 792, 961
PspN4I GGNNCC 7 cut(s) 175, 247, 286, 788, 816, 957, 1366
PspPI GGNCC 3 cut(s) 710, 787, 1034
PstNI CAGNNNCTG 2 cut(s) 68, 830
PsuI RGATCY 1 cut(s) 719
PvuII CAGCTG 1 cut(s) 981
RsaI GTAC 9 cut(s) 223, 247, 271, 373, 382, 457, 556, 1072, 1327
RsaNI GTAC 9 cut(s) 222, 246, 270, 372, 381, 456, 555, 1071, 1326
SacI GAGCTC 1 cut(s) 736
SacII CCGCGG 1 cut(s) 716
SatI GCNGC 4 cut(s) 480, 679, 682, 982
Sau3AI GATC 2 cut(s) 291, 719
Sau96I GGNCC 3 cut(s) 710, 787, 1034
ScaI AGTACT 3 cut(s) 382, 556, 1072
SchI GAGTC 1 cut(s) 85
SduI GDGCHC 3 cut(s) 601, 736, 1057
SfaNI GCATC 2 cut(s) 22, 836
SfcI CTRYAG 1 cut(s) 240
SfoI GGCGCC 1 cut(s) 175
Sfr303I CCGCGG 1 cut(s) 716
SgrBI CCGCGG 1 cut(s) 716
SinI GGWCC 1 cut(s) 710
SmlI CTYRAG 1 cut(s) 1066
SmoI CTYRAG 1 cut(s) 1066
SpeI ACTAGT 3 cut(s) 137, 266, 458
SphI GCATGC 1 cut(s) 1294
Sse9I AATT 8 cut(s) 217, 343, 616, 885, 932, 1218, 1228, 1254
SsiI CCGC 3 cut(s) 482, 713, 715
SspDI GGCGCC 1 cut(s) 173
SspMI CTAG 8 cut(s) 138, 195, 267, 363, 378, 459, 768, 1381
SstI GAGCTC 1 cut(s) 736
TaaI ACNGT 3 cut(s) 166, 391, 433
TaqI TCGA 2 cut(s) 1153, 1177
TasI AATT 8 cut(s) 217, 343, 616, 885, 932, 1218, 1228, 1254
TatI WGTACW 3 cut(s) 380, 554, 1070
TscAI CASTG 2 cut(s) 196, 589
TseFI GTSAC 2 cut(s) 433, 902
TseI GCWGC 4 cut(s) 479, 678, 681, 981
Tsp45I GTSAC 2 cut(s) 433, 902
TspDTI ATGAA 7 cut(s) 687, 878, 878, 1080, 1203, 1239, 1257
TspRI CASTG 2 cut(s) 196, 589
Van91I CCANNNNNTGG 7 cut(s) 209, 281, 392, 422, 518, 542, 752
VpaK11BI GGWCC 1 cut(s) 710
XagI CCTNNNNNAGG 1 cut(s) 309
XapI RAATTY 1 cut(s) 1228
XceI RCATGY 1 cut(s) 1294
XcmI CCANNNNNNNNNTGG 1 cut(s) 1281
XmnI GAANNNNTTC 1 cut(s) 1159
XspI CTAG 8 cut(s) 138, 195, 267, 363, 378, 459, 768, 1381
ZrmI AGTACT 3 cut(s) 382, 556, 1072
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.