Small nuclear ribonucleoprotein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G30220 AT4G30220 |
| fragaria_vesca | FvH4_5g33040 FvH4_7g09330 |
| malus_domestica | MD08G1247300.v1.1 MD13G1253400.v1.1 MD16G1257700.v1.1 |
| prunus_persica | Prupe.1G085500_v2.0.a1 Prupe.1G584000_v2.0.a1 Prupe.1G584000_v2.0.a1 |
| pyrus_communis | pycom08g21420 pycom13g22460 |
| rosa_chinensis | RchiOBHm_Chr7g0231121 |
| rosa_roxburghii | Rroxscaffold_3G00229470 |
| rosa_rugosa | Rorug07G0264800 |
| rosa_samantha | Rh7AG417600 Rh7BG393800 Rh7CG437600 Rh7DG411600 |
| rosa_wichuraiana | Rw7G034580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 226 |
| AcuI | CTGAAG | 1 cut(s) | 165 |
| AfaI | GTAC | 1 cut(s) | 89 |
| AgsI | TTSAA | 2 cut(s) | 37, 248 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 116, 148 |
| AluBI | AGCT | 1 cut(s) | 254 |
| AluI | AGCT | 1 cut(s) | 254 |
| Alw26I | GTCTC | 1 cut(s) | 109 |
| BanI | GGYRCC | 1 cut(s) | 226 |
| BccI | CCATC | 1 cut(s) | 152 |
| BclI | TGATCA | 1 cut(s) | 192 |
| BcoDI | GTCTC | 1 cut(s) | 109 |
| BmiI | GGNNCC | 1 cut(s) | 228 |
| BmrI | ACTGGG | 1 cut(s) | 180 |
| BmsI | GCATC | 1 cut(s) | 188 |
| BmuI | ACTGGG | 1 cut(s) | 180 |
| Bsa29I | ATCGAT | 1 cut(s) | 156 |
| BsaBI | GATNNNNATC | 1 cut(s) | 191 |
| Bse1I | ACTGG | 3 cut(s) | 14, 52, 175 |
| Bse8I | GATNNNNATC | 1 cut(s) | 191 |
| BseCI | ATCGAT | 1 cut(s) | 156 |
| BseGI | GGATG | 1 cut(s) | 241 |
| BseJI | GATNNNNATC | 1 cut(s) | 191 |
| BseMII | CTCAG | 1 cut(s) | 120 |
| BseNI | ACTGG | 3 cut(s) | 14, 52, 175 |
| BshNI | GGYRCC | 1 cut(s) | 226 |
| BshVI | ATCGAT | 1 cut(s) | 156 |
| BsmAI | GTCTC | 1 cut(s) | 109 |
| Bsp143I | GATC | 1 cut(s) | 192 |
| BspCNI | CTCAG | 1 cut(s) | 119 |
| BspDI | ATCGAT | 1 cut(s) | 156 |
| BspLI | GGNNCC | 1 cut(s) | 228 |
| BspT107I | GGYRCC | 1 cut(s) | 226 |
| BsrI | ACTGG | 3 cut(s) | 14, 52, 175 |
| BssMI | GATC | 1 cut(s) | 192 |
| Bst4CI | ACNGT | 2 cut(s) | 58, 261 |
| BstDEI | CTNAG | 1 cut(s) | 106 |
| BstF5I | GGATG | 1 cut(s) | 241 |
| BstKTI | GATC | 1 cut(s) | 195 |
| BstMAI | GTCTC | 1 cut(s) | 109 |
| BstMBI | GATC | 1 cut(s) | 192 |
| Bsu15I | ATCGAT | 1 cut(s) | 156 |
| BsuTUI | ATCGAT | 1 cut(s) | 156 |
| BtsCI | GGATG | 1 cut(s) | 241 |
| BtsIMutI | CAGTG | 2 cut(s) | 141, 168 |
| ClaI | ATCGAT | 1 cut(s) | 156 |
| Csp6I | GTAC | 1 cut(s) | 88 |
| CviJI | RGCY | 2 cut(s) | 5, 254 |
| CviKI_1 | RGCY | 2 cut(s) | 5, 254 |
| CviQI | GTAC | 1 cut(s) | 88 |
| DdeI | CTNAG | 1 cut(s) | 106 |
| DpnI | GATC | 1 cut(s) | 194 |
| DpnII | GATC | 1 cut(s) | 192 |
| Eco57I | CTGAAG | 1 cut(s) | 165 |
| FaiI | YATR | 3 cut(s) | 120, 122, 153 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 84, 116 |
| FbaI | TGATCA | 1 cut(s) | 192 |
| FokI | GGATG | 1 cut(s) | 248 |
| HincII | GTYRAC | 1 cut(s) | 19 |
| HindII | GTYRAC | 1 cut(s) | 19 |
| HinfI | GANTC | 2 cut(s) | 113, 175 |
| HpaI | GTTAAC | 1 cut(s) | 19 |
| Hpy166II | GTNNAC | 1 cut(s) | 19 |
| Hpy188I | TCNGA | 2 cut(s) | 45, 197 |
| Hpy188III | TCNNGA | 2 cut(s) | 34, 64 |
| Hpy8I | GTNNAC | 1 cut(s) | 19 |
| HpyCH4III | ACNGT | 2 cut(s) | 58, 261 |
| HpyCH4V | TGCA | 2 cut(s) | 130, 201 |
| HpyF3I | CTNAG | 1 cut(s) | 106 |
| Ksp22I | TGATCA | 1 cut(s) | 192 |
| KspAI | GTTAAC | 1 cut(s) | 19 |
| Kzo9I | GATC | 1 cut(s) | 192 |
| LpnPI | CCDG | 5 cut(s) | 27, 33, 156, 243, 251 |
| LweI | GCATC | 1 cut(s) | 188 |
| MaeIII | GTNAC | 1 cut(s) | 261 |
| MalI | GATC | 1 cut(s) | 194 |
| MboI | GATC | 1 cut(s) | 192 |
| MboII | GAAGA | 4 cut(s) | 158, 209, 251, 260 |
| MluCI | AATT | 1 cut(s) | 243 |
| MnlI | CCTC | 1 cut(s) | 226 |
| MseI | TTAA | 2 cut(s) | 18, 72 |
| NdeII | GATC | 1 cut(s) | 192 |
| NlaIV | GGNNCC | 1 cut(s) | 228 |
| PfeI | GAWTC | 2 cut(s) | 113, 175 |
| PspN4I | GGNNCC | 1 cut(s) | 228 |
| RsaI | GTAC | 1 cut(s) | 89 |
| RsaNI | GTAC | 1 cut(s) | 88 |
| SaqAI | TTAA | 2 cut(s) | 18, 72 |
| Sau3AI | GATC | 1 cut(s) | 192 |
| SetI | ASST | 3 cut(s) | 31, 97, 256 |
| SfaNI | GCATC | 1 cut(s) | 188 |
| Sse9I | AATT | 1 cut(s) | 243 |
| TaaI | ACNGT | 2 cut(s) | 58, 261 |
| TaqI | TCGA | 1 cut(s) | 156 |
| TasI | AATT | 1 cut(s) | 243 |
| TatI | WGTACW | 1 cut(s) | 87 |
| TfiI | GAWTC | 2 cut(s) | 113, 175 |
| Tru1I | TTAA | 2 cut(s) | 18, 72 |
| Tru9I | TTAA | 2 cut(s) | 18, 72 |
| TscAI | CASTG | 2 cut(s) | 148, 175 |
| TspDTI | ATGAA | 2 cut(s) | 137, 252 |
| TspRI | CASTG | 2 cut(s) | 148, 175 |