Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0006349

Physical Location & Seq

Genomic Coordinates Forward (+)

7761009 .. 7765680

Gene Structure 4672 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G097300.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 792 bp

ATGGCGCTTCTATCTTCGCCTCATCCTCTCCCAACCCAATTCTCTGTTTCCCCCGCCTCTCTACGTGTCCGCCGGCCCCCAATCACCGCCTGCCAGCTATGCACCCACAAGCAATCCGTACGCCAATTCGACCAGTCGATTCTGACTGTCGCCGAGGGTTCGTCTGAGAGCGAGCTCTGGGCCGCCGCGTGTCTCCGCGTTCGCTCCTTCTACCACTTCAAGCCCTCCATGTTTGGCCTCCAAGATCACAGAAGGTACTTGGCGGAACGAGAGTTGGAAGCCATGAAGGAACGTGTGGGAGGAAAGAGGAAGGGCTTTAGAAAAGTTTCTTGCATAAATGCTACCGTCCCATTGTCACAAATTTCAAGCCCTTCGGTTTCAGATGATTTTTGTTCTTCATGTAAGTTTAACAACAATGGAGAAGATCGAGTAGTTGTTGGGACCCTTGATCTTAACCAGTGTGTAAGTCTTCCAGACGAGATTACAGGAAACAGACCAGAGGGGATCGGAGCTGATTTCGCAAGAGCATACTTGAGCAATGTATGTGTTGCCAAGGAACTGCATAGAAATGGATTAGGTTATGCTCTTGTTGCAAAGTCAAAGTTAGTTGCGCAAGAATGGGGCATAAGTGATCTATATGTTCATGTCGCTGTAGACAATGAGCCTGCAAAAAAGTTGTACATGAAGAGTGGTTTTGTTTACGAAAAGGATGAACCTGCATGGCAGGCCAGGTTCCTCGATCGGCCACGAAGGATACTTTTGTGGTTTGGCATCCCAGGCGTCCAACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

264

Amino Acids

29.4

Weight (kDa)

9.01

Isoelectric Point (pI)

54.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006349)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28030 AT4G28030
fragaria_vesca	FvH4_4g23510 FvH4_4g23510 FvH4_4g23510
malus_domestica	MD16G1262600.v1.1
prunus_persica	Prupe.1G097300_v2.0.a1 Prupe.1G097300_v2.0.a1 Prupe.1G097300_v2.0.a1 Prupe.1G097300_v2.0.a1 Prupe.1G097300_v2.0.a1 Prupe.1G097300_v2.0.a1 Prupe.1G097300_v2.0.a1 Prupe.1G097300_v2.0.a1 Prupe.1G097300_v2.0.a1
pyrus_communis	pycom16g23150
rosa_chinensis	RchiOBHm_Chr4g0404931
rosa_laevigata	RLG00000008895
rosa_multiflora	Rmu_sc0000358.1_g000020 Rmu_sc0024668.1_g000003
rosa_roxburghii	Rroxscaffold_5G00349050
rosa_rugosa	Rorug04G0049700
rosa_samantha	Rh4AG126000 Rh4BG120200 Rh4CG134200 Rh4DG119600
rosa_wichuraiana	Rw4G010190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	612
Acc36I	ACCTGC	1 cut(s)	724
AccI	GTMKAC	1 cut(s)	654
AccII	CGCG	2 cut(s)	188, 198
AciI	CCGC	7 cut(s)	54, 70, 87, 183, 186, 196, 263
AclWI	GGATC	1 cut(s)	512
AcoI	YGGCCR	1 cut(s)	743
AcsI	RAATTY	1 cut(s)	360
AcyI	GRCGYC	1 cut(s)	780
AfaI	GTAC	3 cut(s)	120, 257, 680
AflIII	ACRYGT	2 cut(s)	64, 292
AgsI	TTSAA	2 cut(s)	220, 366
AjnI	CCWGG	2 cut(s)	728, 775
AluBI	AGCT	3 cut(s)	97, 175, 512
AluI	AGCT	3 cut(s)	97, 175, 512
Alw21I	GWGCWC	1 cut(s)	177
Alw26I	GTCTC	1 cut(s)	197
AlwI	GGATC	1 cut(s)	512
AoxI	GGCC	5 cut(s)	74, 180, 235, 726, 743
ApoI	RAATTY	1 cut(s)	360
Asp700I	GAANNNNTTC	1 cut(s)	325
AspLEI	GCGC	2 cut(s)	7, 613
AspS9I	GGNCC	3 cut(s)	75, 180, 441
AsuHPI	GGTGA	1 cut(s)	76
AvaII	GGWCC	1 cut(s)	441
BaeI	ACNNNNGTAYC	2 cut(s)	746, 779
BanII	GRGCYC	1 cut(s)	177
BbsI	GAAGAC	1 cut(s)	461
Bbv12I	GWGCWC	1 cut(s)	177
BciT130I	CCWGG	2 cut(s)	730, 777
BciVI	GTATCC	1 cut(s)	747
BcoDI	GTCTC	1 cut(s)	197
BfmI	CTRYAG	1 cut(s)	651
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	1 cut(s)	724
BfuI	GTATCC	1 cut(s)	747
BisI	GCNGC	2 cut(s)	183, 186
BlsI	GCNGC	2 cut(s)	184, 187
Bme1390I	CCNGG	2 cut(s)	730, 777
Bme18I	GGWCC	1 cut(s)	441
BmgT120I	GGNCC	3 cut(s)	75, 180, 441
BmiI	GGNNCC	4 cut(s)	77, 442, 443, 734
BmrFI	CCNGG	2 cut(s)	730, 777
BmsI	GCATC	1 cut(s)	780
BpiI	GAAGAC	1 cut(s)	461
BpuEI	CTTGAG	1 cut(s)	553
BsaAI	YACGTR	1 cut(s)	65
BsaHI	GRCGYC	1 cut(s)	780
BsaJI	CCNNGG	3 cut(s)	153, 552, 775
Bse118I	RCCGGY	1 cut(s)	72
Bse1I	ACTGG	2 cut(s)	133, 457
Bse3DI	GCAATG	1 cut(s)	544
BseBI	CCWGG	2 cut(s)	730, 777
BseDI	CCNNGG	3 cut(s)	153, 552, 775
BseGI	GGATG	3 cut(s)	22, 715, 771
BseMI	GCAATG	1 cut(s)	544
BseMII	CTCAG	1 cut(s)	156
BseNI	ACTGG	2 cut(s)	133, 457
Bsh1236I	CGCG	2 cut(s)	188, 198
Bsh1285I	CGRYCG	1 cut(s)	742
BshFI	GGCC	5 cut(s)	76, 182, 237, 728, 745
BsiEI	CGRYCG	1 cut(s)	742
BsiHKAI	GWGCWC	1 cut(s)	177
BsiSI	CCGG	1 cut(s)	73
BsiWI	CGTACG	1 cut(s)	118
BslFI	GGGAC	2 cut(s)	332, 454
BsmAI	GTCTC	1 cut(s)	197
BsmFI	GGGAC	2 cut(s)	332, 454
BsnI	GGCC	5 cut(s)	76, 182, 237, 728, 745
Bsp1286I	GDGCHC	1 cut(s)	177
Bsp1407I	TGTACA	1 cut(s)	678
Bsp143I	GATC	6 cut(s)	244, 424, 448, 504, 631, 739
BspACI	CCGC	7 cut(s)	54, 70, 87, 183, 186, 196, 263
BspANI	GGCC	5 cut(s)	76, 182, 237, 728, 745
BspCNI	CTCAG	1 cut(s)	157
BspFNI	CGCG	2 cut(s)	188, 198
BspLI	GGNNCC	4 cut(s)	77, 442, 443, 734
BspMI	ACCTGC	1 cut(s)	724
BspPI	GGATC	1 cut(s)	512
BsrDI	GCAATG	1 cut(s)	544
BsrFI	RCCGGY	1 cut(s)	72
BsrGI	TGTACA	1 cut(s)	678
BsrI	ACTGG	2 cut(s)	133, 457
BssAI	RCCGGY	1 cut(s)	72
BssECI	CCNNGG	3 cut(s)	153, 552, 775
BssMI	GATC	6 cut(s)	244, 424, 448, 504, 631, 739
BssNI	GRCGYC	1 cut(s)	780
BssT1I	CCWWGG	1 cut(s)	552
Bst2UI	CCWGG	2 cut(s)	730, 777
Bst4CI	ACNGT	2 cut(s)	148, 346
Bst6I	CTCTTC	1 cut(s)	680
BstACI	GRCGYC	1 cut(s)	780
BstAUI	TGTACA	1 cut(s)	678
BstBAI	YACGTR	1 cut(s)	65
BstC8I	GCNNGC	6 cut(s)	74, 91, 95, 173, 666, 726
BstDEI	CTNAG	1 cut(s)	165
BstF5I	GGATG	3 cut(s)	22, 715, 771
BstFNI	CGCG	2 cut(s)	188, 198
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	2 cut(s)	7, 613
BstKTI	GATC	6 cut(s)	247, 427, 451, 507, 634, 742
BstMAI	GTCTC	1 cut(s)	197
BstMBI	GATC	6 cut(s)	244, 424, 448, 504, 631, 739
BstMCI	CGRYCG	1 cut(s)	742
BstMWI	GCNNNNNNNGC	5 cut(s)	99, 518, 590, 725, 777
BstNI	CCWGG	2 cut(s)	730, 777
BstSCI	CCNGG	2 cut(s)	728, 775
BstSFI	CTRYAG	1 cut(s)	651
BstUI	CGCG	2 cut(s)	188, 198
BstV2I	GAAGAC	1 cut(s)	461
BsuI	GTATCC	1 cut(s)	747
BsuRI	GGCC	5 cut(s)	76, 182, 237, 728, 745
BtsCI	GGATG	3 cut(s)	22, 715, 771
BtsIMutI	CAGTG	1 cut(s)	464
BveI	ACCTGC	1 cut(s)	724
Cac8I	GCNNGC	6 cut(s)	74, 91, 95, 173, 666, 726
CfoI	GCGC	2 cut(s)	7, 613
Cfr10I	RCCGGY	1 cut(s)	72
Cfr13I	GGNCC	3 cut(s)	75, 180, 441
CseI	GACGC	1 cut(s)	769
Csp6I	GTAC	3 cut(s)	119, 256, 679
CviAII	CATG	6 cut(s)	229, 283, 399, 644, 682, 720
CviQI	GTAC	3 cut(s)	119, 256, 679
DdeI	CTNAG	1 cut(s)	165
DpnI	GATC	6 cut(s)	246, 426, 450, 506, 633, 741
DpnII	GATC	6 cut(s)	244, 424, 448, 504, 631, 739
EaeI	YGGCCR	1 cut(s)	743
Eam1104I	CTCTTC	1 cut(s)	680
EarI	CTCTTC	1 cut(s)	680
EciI	GGCGGA	2 cut(s)	59, 278
Ecl136II	GAGCTC	1 cut(s)	175
Eco130I	CCWWGG	1 cut(s)	552
Eco24I	GRGCYC	1 cut(s)	177
Eco47I	GGWCC	1 cut(s)	441
Eco53kI	GAGCTC	1 cut(s)	175
EcoICRI	GAGCTC	1 cut(s)	175
EcoO109I	RGGNCCY	1 cut(s)	441
EcoRII	CCWGG	2 cut(s)	728, 775
EcoT14I	CCWWGG	1 cut(s)	552
EcoT38I	GRGCYC	1 cut(s)	177
ErhI	CCWWGG	1 cut(s)	552
FaeI	CATG	6 cut(s)	232, 286, 402, 647, 685, 723
FaqI	GGGAC	2 cut(s)	332, 454
FatI	CATG	6 cut(s)	228, 282, 398, 643, 681, 719
FauI	CCCGC	1 cut(s)	61
FblI	GTMKAC	1 cut(s)	654
Fnu4HI	GCNGC	2 cut(s)	183, 186
FokI	GGATG	3 cut(s)	9, 722, 758
FriOI	GRGCYC	1 cut(s)	177
Fsp4HI	GCNGC	2 cut(s)	183, 186
FspI	TGCGCA	1 cut(s)	612
GlaI	GCGC	2 cut(s)	6, 612
GluI	GCNGC	2 cut(s)	183, 186
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	5 cut(s)	76, 182, 237, 728, 745
HapII	CCGG	1 cut(s)	73
HgaI	GACGC	1 cut(s)	769
HhaI	GCGC	2 cut(s)	7, 613
Hin1I	GRCGYC	1 cut(s)	780
Hin1II	CATG	6 cut(s)	232, 286, 402, 647, 685, 723
Hin6I	GCGC	2 cut(s)	5, 611
HinP1I	GCGC	2 cut(s)	5, 611
HinfI	GANTC	1 cut(s)	139
HpaII	CCGG	1 cut(s)	73
HphI	GGTGA	1 cut(s)	76
Hpy166II	GTNNAC	2 cut(s)	655, 700
Hpy188I	TCNGA	4 cut(s)	144, 166, 382, 509
Hpy188III	TCNNGA	1 cut(s)	473
Hpy8I	GTNNAC	2 cut(s)	655, 700
HpyAV	CCTTC	6 cut(s)	217, 246, 280, 304, 381, 744
HpyCH4III	ACNGT	2 cut(s)	148, 346
HpyCH4IV	ACGT	2 cut(s)	64, 292
HpyCH4V	TGCA	6 cut(s)	102, 333, 562, 593, 668, 719
HpyF10VI	GCNNNNNNNGC	5 cut(s)	99, 518, 590, 725, 777
HpyF3I	CTNAG	1 cut(s)	165
HpySE526I	ACGT	2 cut(s)	64, 292
Hsp92I	GRCGYC	1 cut(s)	780
Hsp92II	CATG	6 cut(s)	232, 286, 402, 647, 685, 723
HspAI	GCGC	2 cut(s)	5, 611
KflI	GGGWCCC	1 cut(s)	441
KroI	GCCGGC	1 cut(s)	72
KroNI	GCCGGC	1 cut(s)	74
Kzo9I	GATC	6 cut(s)	244, 424, 448, 504, 631, 739
LmnI	GCTCC	2 cut(s)	209, 509
LweI	GCATC	1 cut(s)	780
MaeII	ACGT	2 cut(s)	64, 292
MaeIII	GTNAC	1 cut(s)	354
MalI	GATC	6 cut(s)	246, 426, 450, 506, 633, 741
MboI	GATC	6 cut(s)	244, 424, 448, 504, 631, 739
MboII	GAAGA	5 cut(s)	6, 387, 434, 461, 697
MhlI	GDGCHC	1 cut(s)	177
MluCI	AATT	3 cut(s)	38, 125, 360
MmeI	TCCRAC	1 cut(s)	255
MroNI	GCCGGC	1 cut(s)	72
MroXI	GAANNNNTTC	1 cut(s)	325
MseI	TTAA	2 cut(s)	408, 453
MslI	CAYNNNNRTG	1 cut(s)	567
MspI	CCGG	1 cut(s)	73
MspR9I	CCNGG	2 cut(s)	730, 777
MvaI	CCWGG	2 cut(s)	730, 777
MvnI	CGCG	2 cut(s)	188, 198
MwoI	GCNNNNNNNGC	5 cut(s)	99, 518, 590, 725, 777
NaeI	GCCGGC	1 cut(s)	74
NdeII	GATC	6 cut(s)	244, 424, 448, 504, 631, 739
NgoMIV	GCCGGC	1 cut(s)	72
NlaIII	CATG	6 cut(s)	232, 286, 402, 647, 685, 723
NlaIV	GGNNCC	4 cut(s)	77, 442, 443, 734
NmeAIII	GCCGAG	1 cut(s)	178
NmuCI	GTSAC	1 cut(s)	354
NsbI	TGCGCA	1 cut(s)	612
PdiI	GCCGGC	1 cut(s)	74
PdmI	GAANNNNTTC	1 cut(s)	325
PfeI	GAWTC	1 cut(s)	139
Pfl23II	CGTACG	1 cut(s)	118
PkrI	GCNGC	2 cut(s)	184, 187
Ple19I	CGATCG	1 cut(s)	742
Ppu21I	YACGTR	1 cut(s)	65
PpuMI	RGGWCCY	1 cut(s)	441
Psp124BI	GAGCTC	1 cut(s)	177
Psp5II	RGGWCCY	1 cut(s)	441
Psp6I	CCWGG	2 cut(s)	728, 775
PspGI	CCWGG	2 cut(s)	728, 775
PspLI	CGTACG	1 cut(s)	118
PspN4I	GGNNCC	4 cut(s)	77, 442, 443, 734
PspPI	GGNCC	3 cut(s)	75, 180, 441
PspPPI	RGGWCCY	1 cut(s)	441
PvuI	CGATCG	1 cut(s)	742
RsaI	GTAC	3 cut(s)	120, 257, 680
RsaNI	GTAC	3 cut(s)	119, 256, 679
RseI	CAYNNNNRTG	1 cut(s)	567
SacI	GAGCTC	1 cut(s)	177
SaqAI	TTAA	2 cut(s)	408, 453
SatI	GCNGC	2 cut(s)	183, 186
Sau3AI	GATC	6 cut(s)	244, 424, 448, 504, 631, 739
Sau96I	GGNCC	3 cut(s)	75, 180, 441
ScrFI	CCNGG	2 cut(s)	730, 777
SduI	GDGCHC	1 cut(s)	177
SetI	ASST	9 cut(s)	67, 99, 177, 257, 295, 514, 580, 718, 734
SfaNI	GCATC	1 cut(s)	780
SfcI	CTRYAG	1 cut(s)	651
SinI	GGWCC	1 cut(s)	441
SmiMI	CAYNNNNRTG	1 cut(s)	567
SmlI	CTYRAG	1 cut(s)	532
SmoI	CTYRAG	1 cut(s)	532
Sse9I	AATT	3 cut(s)	38, 125, 360
SsiI	CCGC	7 cut(s)	54, 70, 87, 183, 186, 196, 263
SstI	GAGCTC	1 cut(s)	177
StyD4I	CCNGG	2 cut(s)	728, 775
StyI	CCWWGG	1 cut(s)	552
TaaI	ACNGT	2 cut(s)	148, 346
TaiI	ACGT	2 cut(s)	67, 295
TaqI	TCGA	4 cut(s)	129, 137, 427, 738
TasI	AATT	3 cut(s)	38, 125, 360
TatI	WGTACW	1 cut(s)	678
TauI	GCSGC	2 cut(s)	185, 188
TfiI	GAWTC	1 cut(s)	139
Tru1I	TTAA	2 cut(s)	408, 453
Tru9I	TTAA	2 cut(s)	408, 453
TscAI	CASTG	1 cut(s)	464
TseFI	GTSAC	1 cut(s)	354
Tsp45I	GTSAC	1 cut(s)	354
TspDTI	ATGAA	5 cut(s)	299, 387, 632, 698, 726
TspGWI	ACGGA	1 cut(s)	106
TspRI	CASTG	1 cut(s)	464
VpaK11BI	GGWCC	1 cut(s)	441
XapI	RAATTY	1 cut(s)	360
XmiI	GTMKAC	1 cut(s)	654
XmnI	GAANNNNTTC	1 cut(s)	325

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.