Clathrin assembly protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g08700 FvH4_4g08700 FvH4_4g08700 FvH4_4g08700 FvH4_4g08700 FvH4_4g08700 |
| malus_domestica | MD13G1275100.v1.1 |
| prunus_persica | Prupe.1G099900_v2.0.a1 Prupe.1G099900_v2.0.a1 |
| pyrus_communis | pycom13g28660 |
| rosa_chinensis | RchiOBHm_Chr4g0405191 |
| rosa_laevigata | RLG00000008865 |
| rosa_roxburghii | Rroxscaffold_5G00349440 |
| rosa_rugosa | Rorug04G0054700 Rorug04G0054700 |
| rosa_samantha | Rh4AG129600 Rh4BG123400 Rh4CG136900 Rh4DG123100 |
| rosa_wichuraiana | Rw4G010470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 738 |
| AarI | CACCTGC | 1 cut(s) | 620 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 317 |
| Acc36I | ACCTGC | 2 cut(s) | 541, 620 |
| AccB1I | GGYRCC | 1 cut(s) | 1384 |
| AccII | CGCG | 1 cut(s) | 456 |
| AciI | CCGC | 4 cut(s) | 412, 454, 935, 1673 |
| AclWI | GGATC | 1 cut(s) | 382 |
| AcsI | RAATTY | 6 cut(s) | 352, 732, 818, 828, 1126, 1627 |
| AcuI | CTGAAG | 3 cut(s) | 207, 1257, 1299 |
| AcyI | GRCGYC | 1 cut(s) | 220 |
| AfaI | GTAC | 3 cut(s) | 273, 1351, 1485 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 581, 622, 1381, 1505 |
| AflII | CTTAAG | 1 cut(s) | 25 |
| AflIII | ACRYGT | 2 cut(s) | 139, 1480 |
| AjnI | CCWGG | 2 cut(s) | 753, 942 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 56, 88 |
| Alw21I | GWGCWC | 1 cut(s) | 727 |
| Alw26I | GTCTC | 3 cut(s) | 1178, 1277, 1514 |
| AlwI | GGATC | 1 cut(s) | 382 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 814, 1034 |
| Ama87I | CYCGRG | 1 cut(s) | 487 |
| AoxI | GGCC | 1 cut(s) | 102 |
| ApeKI | GCWGC | 7 cut(s) | 5, 191, 653, 703, 1049, 1588, 1591 |
| ApoI | RAATTY | 6 cut(s) | 352, 732, 818, 828, 1126, 1627 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 677, 709 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1367 |
| AsuHPI | GGTGA | 2 cut(s) | 644, 977 |
| AvaI | CYCGRG | 1 cut(s) | 487 |
| BanI | GGYRCC | 1 cut(s) | 1384 |
| BauI | CACGAG | 1 cut(s) | 180 |
| Bbv12I | GWGCWC | 1 cut(s) | 727 |
| BbvI | GCAGC | 7 cut(s) | 17, 178, 640, 715, 1036, 1600, 1603 |
| BccI | CCATC | 5 cut(s) | 365, 659, 1163, 1328, 1630 |
| BciT130I | CCWGG | 2 cut(s) | 755, 944 |
| BclI | TGATCA | 1 cut(s) | 1036 |
| BcoDI | GTCTC | 3 cut(s) | 1178, 1277, 1514 |
| BfaI | CTAG | 1 cut(s) | 1197 |
| BfmI | CTRYAG | 3 cut(s) | 315, 787, 1513 |
| BfrI | CTTAAG | 1 cut(s) | 25 |
| BfuAI | ACCTGC | 2 cut(s) | 541, 620 |
| BglII | AGATCT | 1 cut(s) | 783 |
| BisI | GCNGC | 8 cut(s) | 6, 192, 654, 704, 936, 1050, 1589, 1592 |
| BlsI | GCNGC | 8 cut(s) | 7, 193, 655, 705, 937, 1051, 1590, 1593 |
| Bme1390I | CCNGG | 2 cut(s) | 755, 944 |
| BmeT110I | CYCGRG | 1 cut(s) | 487 |
| BmiI | GGNNCC | 2 cut(s) | 939, 1386 |
| BmrFI | CCNGG | 2 cut(s) | 755, 944 |
| BmrI | ACTGGG | 1 cut(s) | 1094 |
| BmuI | ACTGGG | 1 cut(s) | 1094 |
| BpmI | CTGGAG | 2 cut(s) | 352, 464 |
| BsaHI | GRCGYC | 1 cut(s) | 220 |
| BsaI | GGTCTC | 2 cut(s) | 1178, 1514 |
| BsaJI | CCNNGG | 5 cut(s) | 99, 129, 205, 861, 942 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 325, 355 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 581, 622, 1381, 1505 |
| Bse1I | ACTGG | 4 cut(s) | 87, 1100, 1308, 1323 |
| Bse3DI | GCAATG | 5 cut(s) | 93, 122, 676, 1347, 1525 |
| BseBI | CCWGG | 2 cut(s) | 755, 944 |
| BseDI | CCNNGG | 5 cut(s) | 99, 129, 205, 861, 942 |
| BseGI | GGATG | 3 cut(s) | 91, 201, 376 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 581, 622, 1381, 1505 |
| BseMI | GCAATG | 5 cut(s) | 93, 122, 676, 1347, 1525 |
| BseMII | CTCAG | 1 cut(s) | 1070 |
| BseNI | ACTGG | 4 cut(s) | 87, 1100, 1308, 1323 |
| BseXI | GCAGC | 7 cut(s) | 17, 178, 640, 715, 1036, 1600, 1603 |
| BseYI | CCCAGC | 1 cut(s) | 887 |
| Bsh1236I | CGCG | 1 cut(s) | 456 |
| BshFI | GGCC | 1 cut(s) | 104 |
| BshNI | GGYRCC | 1 cut(s) | 1384 |
| BsiHKAI | GWGCWC | 1 cut(s) | 727 |
| BsiHKCI | CYCGRG | 1 cut(s) | 487 |
| BslFI | GGGAC | 3 cut(s) | 1039, 1418, 1481 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 581, 622, 1381, 1505 |
| BsmAI | GTCTC | 3 cut(s) | 1178, 1277, 1514 |
| BsmFI | GGGAC | 3 cut(s) | 1039, 1418, 1481 |
| BsnI | GGCC | 1 cut(s) | 104 |
| Bso31I | GGTCTC | 2 cut(s) | 1178, 1514 |
| BsoBI | CYCGRG | 1 cut(s) | 487 |
| Bsp1286I | GDGCHC | 1 cut(s) | 727 |
| Bsp1407I | TGTACA | 2 cut(s) | 271, 1483 |
| Bsp143I | GATC | 5 cut(s) | 374, 481, 783, 1036, 1072 |
| Bsp19I | CCATGG | 2 cut(s) | 205, 861 |
| BspACI | CCGC | 4 cut(s) | 412, 454, 935, 1673 |
| BspANI | GGCC | 1 cut(s) | 104 |
| BspCNI | CTCAG | 1 cut(s) | 1071 |
| BspFNI | CGCG | 1 cut(s) | 456 |
| BspHI | TCATGA | 3 cut(s) | 112, 1560, 1581 |
| BspLI | GGNNCC | 2 cut(s) | 939, 1386 |
| BspMAI | CTGCAG | 1 cut(s) | 791 |
| BspMI | ACCTGC | 2 cut(s) | 541, 620 |
| BspPI | GGATC | 1 cut(s) | 382 |
| BspQI | GCTCTTC | 1 cut(s) | 429 |
| BspT107I | GGYRCC | 1 cut(s) | 1384 |
| BspTI | CTTAAG | 1 cut(s) | 25 |
| BspTNI | GGTCTC | 2 cut(s) | 1178, 1514 |
| BsrDI | GCAATG | 5 cut(s) | 93, 122, 676, 1347, 1525 |
| BsrGI | TGTACA | 2 cut(s) | 271, 1483 |
| BsrI | ACTGG | 4 cut(s) | 87, 1100, 1308, 1323 |
| BssECI | CCNNGG | 5 cut(s) | 99, 129, 205, 861, 942 |
| BssMI | GATC | 5 cut(s) | 374, 481, 783, 1036, 1072 |
| BssNI | GRCGYC | 1 cut(s) | 220 |
| BssSI | CACGAG | 1 cut(s) | 180 |
| BssT1I | CCWWGG | 4 cut(s) | 99, 129, 205, 861 |
| Bst2BI | CACGAG | 1 cut(s) | 180 |
| Bst2UI | CCWGG | 2 cut(s) | 755, 944 |
| Bst4CI | ACNGT | 5 cut(s) | 46, 262, 278, 589, 1599 |
| Bst6I | CTCTTC | 3 cut(s) | 429, 753, 1275 |
| BstACI | GRCGYC | 1 cut(s) | 220 |
| BstAFI | CTTAAG | 1 cut(s) | 25 |
| BstAUI | TGTACA | 2 cut(s) | 271, 1483 |
| BstC8I | GCNNGC | 3 cut(s) | 10, 1054, 1209 |
| BstDEI | CTNAG | 6 cut(s) | 224, 495, 521, 642, 1079, 1287 |
| BstDSI | CCRYGG | 2 cut(s) | 205, 861 |
| BstF5I | GGATG | 3 cut(s) | 91, 201, 376 |
| BstFNI | CGCG | 1 cut(s) | 456 |
| BstKTI | GATC | 5 cut(s) | 377, 484, 786, 1039, 1075 |
| BstMAI | GTCTC | 3 cut(s) | 1178, 1277, 1514 |
| BstMBI | GATC | 5 cut(s) | 374, 481, 783, 1036, 1072 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 167, 191, 722, 1250 |
| BstNI | CCWGG | 2 cut(s) | 755, 944 |
| BstNSI | RCATGY | 2 cut(s) | 143, 1484 |
| BstSCI | CCNGG | 2 cut(s) | 753, 942 |
| BstSFI | CTRYAG | 3 cut(s) | 315, 787, 1513 |
| BstUI | CGCG | 1 cut(s) | 456 |
| BstV1I | GCAGC | 7 cut(s) | 17, 178, 640, 715, 1036, 1600, 1603 |
| BstX2I | RGATCY | 1 cut(s) | 783 |
| BstYI | RGATCY | 1 cut(s) | 783 |
| BsuRI | GGCC | 1 cut(s) | 104 |
| BtgI | CCRYGG | 2 cut(s) | 205, 861 |
| BtsCI | GGATG | 3 cut(s) | 91, 201, 376 |
| BtsIMutI | CAGTG | 5 cut(s) | 80, 251, 812, 1316, 1618 |
| BveI | ACCTGC | 2 cut(s) | 541, 620 |
| Cac8I | GCNNGC | 3 cut(s) | 10, 1054, 1209 |
| CaiI | CAGNNNCTG | 2 cut(s) | 814, 1034 |
| CciI | TCATGA | 3 cut(s) | 112, 1560, 1581 |
| CseI | GACGC | 4 cut(s) | 209, 320, 428, 890 |
| Csp6I | GTAC | 3 cut(s) | 272, 1350, 1484 |
| CviAII | CATG | 9 cut(s) | 113, 140, 206, 362, 862, 1468, 1481, 1561, 1582 |
| CviQI | GTAC | 3 cut(s) | 272, 1350, 1484 |
| DdeI | CTNAG | 6 cut(s) | 224, 495, 521, 642, 1079, 1287 |
| DpnI | GATC | 5 cut(s) | 376, 483, 785, 1038, 1074 |
| DpnII | GATC | 5 cut(s) | 374, 481, 783, 1036, 1072 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 317 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 317 |
| Eam1104I | CTCTTC | 3 cut(s) | 429, 753, 1275 |
| EarI | CTCTTC | 3 cut(s) | 429, 753, 1275 |
| Eco130I | CCWWGG | 4 cut(s) | 99, 129, 205, 861 |
| Eco31I | GGTCTC | 2 cut(s) | 1178, 1514 |
| Eco57I | CTGAAG | 3 cut(s) | 207, 1257, 1299 |
| Eco88I | CYCGRG | 1 cut(s) | 487 |
| EcoRII | CCWGG | 2 cut(s) | 753, 942 |
| EcoT14I | CCWWGG | 4 cut(s) | 99, 129, 205, 861 |
| EcoT22I | ATGCAT | 1 cut(s) | 424 |
| ErhI | CCWWGG | 4 cut(s) | 99, 129, 205, 861 |
| FaeI | CATG | 9 cut(s) | 116, 143, 209, 365, 865, 1471, 1484, 1564, 1585 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 19, 51 |
| FaqI | GGGAC | 3 cut(s) | 1039, 1418, 1481 |
| FatI | CATG | 9 cut(s) | 112, 139, 205, 361, 861, 1467, 1480, 1560, 1581 |
| FauNDI | CATATG | 2 cut(s) | 345, 418 |
| FbaI | TGATCA | 1 cut(s) | 1036 |
| Fnu4HI | GCNGC | 8 cut(s) | 6, 192, 654, 704, 936, 1050, 1589, 1592 |
| FokI | GGATG | 3 cut(s) | 98, 188, 383 |
| Fsp4HI | GCNGC | 8 cut(s) | 6, 192, 654, 704, 936, 1050, 1589, 1592 |
| FspBI | CTAG | 1 cut(s) | 1197 |
| GluI | GCNGC | 8 cut(s) | 6, 192, 654, 704, 936, 1050, 1589, 1592 |
| GsaI | CCCAGC | 1 cut(s) | 891 |
| GsuI | CTGGAG | 2 cut(s) | 352, 464 |
| HaeIII | GGCC | 1 cut(s) | 104 |
| HgaI | GACGC | 4 cut(s) | 209, 320, 428, 890 |
| Hin1I | GRCGYC | 1 cut(s) | 220 |
| Hin1II | CATG | 9 cut(s) | 116, 143, 209, 365, 865, 1471, 1484, 1564, 1585 |
| HindIII | AAGCTT | 3 cut(s) | 22, 33, 1575 |
| HinfI | GANTC | 5 cut(s) | 232, 604, 1112, 1157, 1193 |
| HphI | GGTGA | 2 cut(s) | 644, 977 |
| Hpy166II | GTNNAC | 3 cut(s) | 274, 877, 1352 |
| Hpy188I | TCNGA | 8 cut(s) | 722, 1041, 1080, 1111, 1117, 1156, 1192, 1362 |
| Hpy188III | TCNNGA | 8 cut(s) | 113, 443, 489, 563, 747, 853, 1561, 1582 |
| Hpy8I | GTNNAC | 3 cut(s) | 274, 877, 1352 |
| Hpy99I | CGWCG | 1 cut(s) | 884 |
| HpyAV | CCTTC | 4 cut(s) | 238, 569, 919, 956 |
| HpyCH4III | ACNGT | 5 cut(s) | 46, 262, 278, 589, 1599 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 167, 191, 722, 1250 |
| HpyF3I | CTNAG | 6 cut(s) | 224, 495, 521, 642, 1079, 1287 |
| Hsp92I | GRCGYC | 1 cut(s) | 220 |
| Hsp92II | CATG | 9 cut(s) | 116, 143, 209, 365, 865, 1471, 1484, 1564, 1585 |
| Ksp22I | TGATCA | 1 cut(s) | 1036 |
| Kzo9I | GATC | 5 cut(s) | 374, 481, 783, 1036, 1072 |
| LguI | GCTCTTC | 1 cut(s) | 429 |
| LmnI | GCTCC | 5 cut(s) | 792, 889, 943, 1204, 1228 |
| Lsp1109I | GCAGC | 7 cut(s) | 17, 178, 640, 715, 1036, 1600, 1603 |
| MaeI | CTAG | 1 cut(s) | 1197 |
| MaeIII | GTNAC | 2 cut(s) | 308, 1102 |
| MalI | GATC | 5 cut(s) | 376, 483, 785, 1038, 1074 |
| MboI | GATC | 5 cut(s) | 374, 481, 783, 1036, 1072 |
| MboII | GAAGA | 8 cut(s) | 446, 770, 878, 941, 1016, 1067, 1292, 1623 |
| MfeI | CAATTG | 2 cut(s) | 238, 1143 |
| MflI | RGATCY | 1 cut(s) | 783 |
| MhlI | GDGCHC | 1 cut(s) | 727 |
| MlyI | GAGTC | 3 cut(s) | 226, 1121, 1202 |
| MmeI | TCCRAC | 3 cut(s) | 28, 1279, 1553 |
| MnlI | CCTC | 8 cut(s) | 189, 279, 332, 574, 756, 1039, 1399, 1546 |
| Mph1103I | ATGCAT | 1 cut(s) | 424 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1367 |
| MseI | TTAA | 4 cut(s) | 26, 146, 798, 974 |
| MslI | CAYNNNNRTG | 2 cut(s) | 711, 1457 |
| MspA1I | CMGCKG | 1 cut(s) | 1277 |
| MspCI | CTTAAG | 1 cut(s) | 25 |
| MspR9I | CCNGG | 2 cut(s) | 755, 944 |
| MunI | CAATTG | 2 cut(s) | 238, 1143 |
| MvaI | CCWGG | 2 cut(s) | 755, 944 |
| MvnI | CGCG | 1 cut(s) | 456 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 167, 191, 722, 1250 |
| NcoI | CCATGG | 2 cut(s) | 205, 861 |
| NdeI | CATATG | 2 cut(s) | 345, 418 |
| NdeII | GATC | 5 cut(s) | 374, 481, 783, 1036, 1072 |
| NlaIII | CATG | 9 cut(s) | 116, 143, 209, 365, 865, 1471, 1484, 1564, 1585 |
| NlaIV | GGNNCC | 2 cut(s) | 939, 1386 |
| NmuCI | GTSAC | 1 cut(s) | 308 |
| NsiI | ATGCAT | 1 cut(s) | 424 |
| NspI | RCATGY | 2 cut(s) | 143, 1484 |
| PaeR7I | CTCGAG | 1 cut(s) | 487 |
| PagI | TCATGA | 3 cut(s) | 112, 1560, 1581 |
| PaqCI | CACCTGC | 1 cut(s) | 620 |
| PciI | ACATGT | 2 cut(s) | 139, 1480 |
| PciSI | GCTCTTC | 1 cut(s) | 429 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1367 |
| PfeI | GAWTC | 2 cut(s) | 604, 1157 |
| PflFI | GACNNNGTC | 1 cut(s) | 1493 |
| PkrI | GCNGC | 8 cut(s) | 7, 193, 655, 705, 937, 1051, 1590, 1593 |
| PleI | GAGTC | 3 cut(s) | 226, 1120, 1201 |
| PpsI | GAGTC | 3 cut(s) | 226, 1120, 1201 |
| PscI | ACATGT | 2 cut(s) | 139, 1480 |
| PsiI | TTATAA | 1 cut(s) | 738 |
| Psp6I | CCWGG | 2 cut(s) | 753, 942 |
| PspFI | CCCAGC | 1 cut(s) | 887 |
| PspGI | CCWGG | 2 cut(s) | 753, 942 |
| PspN4I | GGNNCC | 2 cut(s) | 939, 1386 |
| PstI | CTGCAG | 1 cut(s) | 791 |
| PstNI | CAGNNNCTG | 2 cut(s) | 814, 1034 |
| PsuI | RGATCY | 1 cut(s) | 783 |
| PsyI | GACNNNGTC | 1 cut(s) | 1493 |
| PvuII | CAGCTG | 1 cut(s) | 1277 |
| RsaI | GTAC | 3 cut(s) | 273, 1351, 1485 |
| RsaNI | GTAC | 3 cut(s) | 272, 1350, 1484 |
| RseI | CAYNNNNRTG | 2 cut(s) | 711, 1457 |
| SapI | GCTCTTC | 1 cut(s) | 429 |
| SaqAI | TTAA | 4 cut(s) | 26, 146, 798, 974 |
| SatI | GCNGC | 8 cut(s) | 6, 192, 654, 704, 936, 1050, 1589, 1592 |
| Sau3AI | GATC | 5 cut(s) | 374, 481, 783, 1036, 1072 |
| SchI | GAGTC | 3 cut(s) | 226, 1121, 1202 |
| ScrFI | CCNGG | 2 cut(s) | 755, 944 |
| SduI | GDGCHC | 1 cut(s) | 727 |
| SfcI | CTRYAG | 3 cut(s) | 315, 787, 1513 |
| Sfr274I | CTCGAG | 1 cut(s) | 487 |
| SlaI | CTCGAG | 1 cut(s) | 487 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 711, 1457 |
| SmlI | CTYRAG | 2 cut(s) | 25, 487 |
| SmoI | CTYRAG | 2 cut(s) | 25, 487 |
| SsiI | CCGC | 4 cut(s) | 412, 454, 935, 1673 |
| SspMI | CTAG | 1 cut(s) | 1197 |
| StyD4I | CCNGG | 2 cut(s) | 753, 942 |
| StyI | CCWWGG | 4 cut(s) | 99, 129, 205, 861 |
| TaaI | ACNGT | 5 cut(s) | 46, 262, 278, 589, 1599 |
| TaqI | TCGA | 4 cut(s) | 488, 729, 746, 1086 |
| TatI | WGTACW | 3 cut(s) | 271, 1349, 1483 |
| TauI | GCSGC | 1 cut(s) | 938 |
| TfiI | GAWTC | 2 cut(s) | 604, 1157 |
| Tru1I | TTAA | 4 cut(s) | 26, 146, 798, 974 |
| Tru9I | TTAA | 4 cut(s) | 26, 146, 798, 974 |
| TscAI | CASTG | 5 cut(s) | 87, 258, 819, 1323, 1618 |
| TseFI | GTSAC | 1 cut(s) | 308 |
| TseI | GCWGC | 7 cut(s) | 5, 191, 653, 703, 1049, 1588, 1591 |
| Tsp45I | GTSAC | 1 cut(s) | 308 |
| TspDTI | ATGAA | 7 cut(s) | 132, 811, 941, 1104, 1549, 1570, 1687 |
| TspRI | CASTG | 5 cut(s) | 87, 258, 819, 1323, 1618 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1493 |
| Vha464I | CTTAAG | 1 cut(s) | 25 |
| XapI | RAATTY | 6 cut(s) | 352, 732, 818, 828, 1126, 1627 |
| XceI | RCATGY | 2 cut(s) | 143, 1484 |
| XhoI | CTCGAG | 1 cut(s) | 487 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1367 |
| XspI | CTAG | 1 cut(s) | 1197 |
| Zsp2I | ATGCAT | 1 cut(s) | 424 |