Prupe.1G137100_v2.0.a1

Peroxidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0017649
Physical Location & Seq
Forward (+)
10751595 .. 10753971
2377 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G137100.1

Sequence Viewer

Length: 996 bp
ATGGCAAGCTTATTGTTTATTTCCTTACCTTTGTTGCTGATCATCATGGCAGTGGTTTTAGTCACACCAGCGATTTCTGTGCCTCTGAAAATTGGTTTCTACCAGACTGCATGCCCCTCGGCTGAGAGCATGGTGAGAAATACAGTCACTAAGGCACTTGCCGCAGATCCTGCCATAGCTGCTGCCCTCATCAGACTCCATTTCCACGACTGTTTTGTAAGGGGTTGTGATGCTTCTATTCTGCTTGATTCTAAGCCGGGAATGCCAGCAGAGAAAGAAAGCACGATGAACAAAGGCGTCCAAGGCTTTGAGGTGATAGACGAAGCAAAGGCGGCGATAGAAGCCCAATGCCCAAACACAGTTTCCTGCGCAGACATCATCGCCTTCGCCGCCAGAGACAGCGTTTTCAGTGCCGGCGGCCTCCGCTATGCTGTCGCTGGCGGAAGGCGCGACGGCTTGGCTTCGTTGATCTACGAAGCGGCCAAAAATCTCCCCGGTGCATTTTTCAATTCGACAGAGTTGAGGGGCAACTTTGCAAGAAAAGGGCTGTCAATGGAGGAAATGGTGACGCTCTCTGGAGCTCACTCCATTGGAGAGTCTCATTGCTCTGCCTTCTCCAAAAGGCTTTACTCTTTCAGTGCAAGATTTCCACAAGACCCTTCGATGGATGGGGCTTATGCTGAAACTTTAAAATCTAAATGCCCAAGGCCTCGGAATTTGACAGATTCTGTTGACCCAGTTGTGGCTTTTGATCTCTCAACGCCTGCTCTGCTTGACAACAACTACTACAAGAACTTGGTGAGCCACAGAGGGCTATTGGCTTCTGATCAGGAGCTTTGGAGCAGTGGGTTGACGAGGAAGATGGTGAAGTACAACAGGAACCATCCGGGTGCATGGGCCTCTAAGTTTGCTGCTGCAATGGTGAAGATGGGTTCCATTGATGTGATGGTGGGTAGAAATGGAGAAATCAGGAACAACTGCAGGGCTGTGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
peroxidase

Protein Analysis

332

Amino Acids

35.61

Weight (kDa)

8.73

Isoelectric Point (pI)

36.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017649)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g18000
prunus_persica Prupe.1G137100_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0422201
rosa_laevigata RLG00000007628
rosa_multiflora Rmu_co8258485.1_g000001
rosa_roxburghii Rroxscaffold_5G00364320
rosa_rugosa Rorug04G0178500
rosa_samantha Rh4AG237600 Rh4BG240800 Rh4CG252700 Rh4DG236400
rosa_wichuraiana Rw4G020560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 370
AccII CGCG 1 cut(s) 450
AciI CCGC 7 cut(s) 162, 332, 390, 417, 424, 441, 479
AclWI GGATC 1 cut(s) 161
AcoI YGGCCR 1 cut(s) 480
AcsI RAATTY 1 cut(s) 715
AcyI GRCGYC 1 cut(s) 297
AfaI GTAC 1 cut(s) 872
AfiI CCNNNNNNNGG 2 cut(s) 664, 742
AgsI TTSAA 1 cut(s) 508
AjuI GAANNNNNNNTTGG 2 cut(s) 346, 378
AluBI AGCT 4 cut(s) 9, 179, 581, 835
AluI AGCT 4 cut(s) 9, 179, 581, 835
Alw21I GWGCWC 1 cut(s) 583
Alw26I GTCTC 2 cut(s) 390, 603
AlwI GGATC 1 cut(s) 161
AlwNI CAGNNNCTG 2 cut(s) 170, 728
AoxI GGCC 4 cut(s) 418, 480, 707, 897
ApeKI GCWGC 4 cut(s) 179, 182, 911, 914
ApoI RAATTY 1 cut(s) 715
AspLEI GCGC 2 cut(s) 371, 450
AspS9I GGNCC 1 cut(s) 897
AsuC2I CCSGG 3 cut(s) 258, 495, 888
AsuHPI GGTGA 6 cut(s) 145, 325, 577, 811, 877, 934
BanII GRGCYC 1 cut(s) 583
Bbv12I GWGCWC 1 cut(s) 583
BbvI GCAGC 4 cut(s) 166, 169, 898, 901
BccI CCATC 6 cut(s) 658, 662, 856, 891, 922, 940
BceAI ACGGC 1 cut(s) 469
BcgI CGANNNNNNTGC 4 cut(s) 61, 95, 99, 133
BclI TGATCA 2 cut(s) 39, 826
BcnI CCSGG 3 cut(s) 258, 495, 888
BcoDI GTCTC 2 cut(s) 390, 603
BfmI CTRYAG 1 cut(s) 979
BisI GCNGC 9 cut(s) 162, 180, 183, 333, 390, 418, 480, 912, 915
BlsI GCNGC 9 cut(s) 163, 181, 184, 334, 391, 419, 481, 913, 916
Bme1390I CCNGG 3 cut(s) 258, 495, 888
BmgT120I GGNCC 1 cut(s) 897
BmiI GGNNCC 2 cut(s) 881, 934
BmrFI CCNGG 3 cut(s) 258, 495, 888
BmrI ACTGGG 1 cut(s) 731
BmsI GCATC 1 cut(s) 220
BmuI ACTGGG 1 cut(s) 731
BpmI CTGGAG 1 cut(s) 597
BpuMI CCSGG 3 cut(s) 258, 495, 888
BsaHI GRCGYC 1 cut(s) 297
BsaJI CCNNGG 5 cut(s) 117, 301, 493, 704, 710
Bsc4I CCNNNNNNNGG 2 cut(s) 664, 742
Bse118I RCCGGY 1 cut(s) 413
Bse1I ACTGG 1 cut(s) 737
Bse3DI GCAATG 2 cut(s) 601, 924
BseDI CCNNGG 5 cut(s) 117, 301, 493, 704, 710
BseGI GGATG 2 cut(s) 673, 883
BseLI CCNNNNNNNGG 2 cut(s) 664, 742
BseMI GCAATG 2 cut(s) 601, 924
BseMII CTCAG 1 cut(s) 114
BseNI ACTGG 1 cut(s) 737
BseXI GCAGC 4 cut(s) 166, 169, 898, 901
Bsh1236I CGCG 1 cut(s) 450
BshFI GGCC 4 cut(s) 420, 482, 709, 899
BsiHKAI GWGCWC 1 cut(s) 583
BsiSI CCGG 4 cut(s) 257, 414, 495, 887
BslI CCNNNNNNNGG 2 cut(s) 664, 742
BsmAI GTCTC 2 cut(s) 390, 603
BsmI GAATGC 1 cut(s) 267
BsnI GGCC 4 cut(s) 420, 482, 709, 899
Bsp1286I GDGCHC 1 cut(s) 583
Bsp143I GATC 5 cut(s) 39, 166, 468, 751, 826
BspACI CCGC 7 cut(s) 162, 332, 390, 417, 424, 441, 479
BspANI GGCC 4 cut(s) 420, 482, 709, 899
BspCNI CTCAG 1 cut(s) 115
BspFNI CGCG 1 cut(s) 450
BspLI GGNNCC 2 cut(s) 881, 934
BspMAI CTGCAG 1 cut(s) 983
BspPI GGATC 1 cut(s) 161
BsrDI GCAATG 2 cut(s) 601, 924
BsrFI RCCGGY 1 cut(s) 413
BsrI ACTGG 1 cut(s) 737
BssAI RCCGGY 1 cut(s) 413
BssECI CCNNGG 5 cut(s) 117, 301, 493, 704, 710
BssMI GATC 5 cut(s) 39, 166, 468, 751, 826
BssNI GRCGYC 1 cut(s) 297
BssT1I CCWWGG 2 cut(s) 301, 704
Bst4CI ACNGT 3 cut(s) 145, 212, 361
BstACI GRCGYC 1 cut(s) 297
BstAPI GCANNNNNTGC 1 cut(s) 170
BstC8I GCNNGC 6 cut(s) 7, 112, 267, 415, 439, 765
BstDEI CTNAG 4 cut(s) 123, 150, 252, 903
BstF5I GGATG 2 cut(s) 673, 883
BstFNI CGCG 1 cut(s) 450
BstHHI GCGC 2 cut(s) 371, 450
BstKTI GATC 5 cut(s) 42, 169, 471, 754, 829
BstMAI GTCTC 2 cut(s) 390, 603
BstMBI GATC 5 cut(s) 39, 166, 468, 751, 826
BstNSI RCATGY 1 cut(s) 114
BstSCI CCNGG 3 cut(s) 256, 493, 886
BstSFI CTRYAG 1 cut(s) 979
BstUI CGCG 1 cut(s) 450
BstV1I GCAGC 4 cut(s) 166, 169, 898, 901
BstX2I RGATCY 1 cut(s) 166
BstYI RGATCY 1 cut(s) 166
BsuRI GGCC 4 cut(s) 420, 482, 709, 899
BtgZI GCGATG 1 cut(s) 364
BtsCI GGATG 2 cut(s) 673, 883
BtsI GCAGTG 2 cut(s) 57, 850
BtsIMutI CAGTG 4 cut(s) 57, 415, 643, 850
Cac8I GCNNGC 6 cut(s) 7, 112, 267, 415, 439, 765
CaiI CAGNNNCTG 2 cut(s) 170, 728
CfoI GCGC 2 cut(s) 371, 450
Cfr10I RCCGGY 1 cut(s) 413
Cfr13I GGNCC 1 cut(s) 897
CseI GACGC 2 cut(s) 286, 577
Csp6I GTAC 1 cut(s) 871
CviAII CATG 4 cut(s) 46, 111, 130, 894
CviQI GTAC 1 cut(s) 871
DdeI CTNAG 4 cut(s) 123, 150, 252, 903
DpnI GATC 5 cut(s) 41, 168, 470, 753, 828
DpnII GATC 5 cut(s) 39, 166, 468, 751, 826
DraI TTTAAA 1 cut(s) 690
EaeI YGGCCR 1 cut(s) 480
EciI GGCGGA 1 cut(s) 456
Ecl136II GAGCTC 1 cut(s) 581
Eco130I CCWWGG 2 cut(s) 301, 704
Eco147I AGGCCT 1 cut(s) 709
Eco24I GRGCYC 1 cut(s) 583
Eco53kI GAGCTC 1 cut(s) 581
EcoICRI GAGCTC 1 cut(s) 581
EcoT14I CCWWGG 2 cut(s) 301, 704
EcoT38I GRGCYC 1 cut(s) 583
ErhI CCWWGG 2 cut(s) 301, 704
FaeI CATG 4 cut(s) 49, 114, 133, 897
FaiI YATR 7 cut(s) 47, 112, 131, 176, 429, 678, 895
FatI CATG 4 cut(s) 45, 110, 129, 893
FbaI TGATCA 2 cut(s) 39, 826
Fnu4HI GCNGC 9 cut(s) 162, 180, 183, 333, 390, 418, 480, 912, 915
FokI GGATG 2 cut(s) 680, 870
FriOI GRGCYC 1 cut(s) 583
Fsp4HI GCNGC 9 cut(s) 162, 180, 183, 333, 390, 418, 480, 912, 915
FspI TGCGCA 1 cut(s) 370
GlaI GCGC 2 cut(s) 370, 449
GluI GCNGC 9 cut(s) 162, 180, 183, 333, 390, 418, 480, 912, 915
GsuI CTGGAG 1 cut(s) 597
HaeIII GGCC 4 cut(s) 420, 482, 709, 899
HapII CCGG 4 cut(s) 257, 414, 495, 887
HgaI GACGC 2 cut(s) 286, 577
HhaI GCGC 2 cut(s) 371, 450
Hin1I GRCGYC 1 cut(s) 297
Hin1II CATG 4 cut(s) 49, 114, 133, 897
Hin6I GCGC 2 cut(s) 369, 448
HinP1I GCGC 2 cut(s) 369, 448
HincII GTYRAC 2 cut(s) 733, 852
HindII GTYRAC 2 cut(s) 733, 852
HindIII AAGCTT 1 cut(s) 7
HinfI GANTC 4 cut(s) 195, 248, 596, 725
HpaII CCGG 4 cut(s) 257, 414, 495, 887
HphI GGTGA 6 cut(s) 145, 325, 577, 811, 877, 934
Hpy166II GTNNAC 2 cut(s) 733, 852
Hpy188I TCNGA 4 cut(s) 87, 194, 714, 826
Hpy188III TCNNGA 3 cut(s) 576, 830, 970
Hpy8I GTNNAC 2 cut(s) 733, 852
Hpy99I CGWCG 1 cut(s) 455
HpyAV CCTTC 4 cut(s) 394, 438, 622, 669
HpyCH4III ACNGT 3 cut(s) 145, 212, 361
HpyCH4V TGCA 7 cut(s) 110, 500, 536, 641, 893, 917, 981
HpyF3I CTNAG 4 cut(s) 123, 150, 252, 903
Hsp92I GRCGYC 1 cut(s) 297
Hsp92II CATG 4 cut(s) 49, 114, 133, 897
HspAI GCGC 2 cut(s) 369, 448
KroI GCCGGC 1 cut(s) 413
KroNI GCCGGC 1 cut(s) 415
Ksp22I TGATCA 2 cut(s) 39, 826
Kzo9I GATC 5 cut(s) 39, 166, 468, 751, 826
LmnI GCTCC 3 cut(s) 578, 832, 840
Lsp1109I GCAGC 4 cut(s) 166, 169, 898, 901
LweI GCATC 1 cut(s) 220
MaeIII GTNAC 3 cut(s) 61, 145, 565
MalI GATC 5 cut(s) 41, 168, 470, 753, 828
MboI GATC 5 cut(s) 39, 166, 468, 751, 826
MboII GAAGA 2 cut(s) 871, 937
MflI RGATCY 1 cut(s) 166
MhlI GDGCHC 1 cut(s) 583
MluCI AATT 4 cut(s) 90, 508, 715, 991
MlyI GAGTC 2 cut(s) 189, 605
MroNI GCCGGC 1 cut(s) 413
MseI TTAA 1 cut(s) 689
MslI CAYNNNNRTG 3 cut(s) 50, 888, 941
MspI CCGG 4 cut(s) 257, 414, 495, 887
MspR9I CCNGG 3 cut(s) 258, 495, 888
Mva1269I GAATGC 1 cut(s) 267
MvnI CGCG 1 cut(s) 450
NaeI GCCGGC 1 cut(s) 415
NciI CCSGG 3 cut(s) 258, 495, 888
NdeII GATC 5 cut(s) 39, 166, 468, 751, 826
NgoMIV GCCGGC 1 cut(s) 413
NlaIII CATG 4 cut(s) 49, 114, 133, 897
NlaIV GGNNCC 2 cut(s) 881, 934
NmeAIII GCCGAG 1 cut(s) 98
NmuCI GTSAC 3 cut(s) 61, 145, 565
NsbI TGCGCA 1 cut(s) 370
NspI RCATGY 1 cut(s) 114
PaeI GCATGC 1 cut(s) 114
PceI AGGCCT 1 cut(s) 709
PctI GAATGC 1 cut(s) 267
PdiI GCCGGC 1 cut(s) 415
PfeI GAWTC 2 cut(s) 248, 725
PkrI GCNGC 9 cut(s) 163, 181, 184, 334, 391, 419, 481, 913, 916
PleI GAGTC 2 cut(s) 189, 604
PpsI GAGTC 2 cut(s) 189, 604
Psp124BI GAGCTC 1 cut(s) 583
PspN4I GGNNCC 2 cut(s) 881, 934
PspPI GGNCC 1 cut(s) 897
PstI CTGCAG 1 cut(s) 983
PstNI CAGNNNCTG 2 cut(s) 170, 728
PsuI RGATCY 1 cut(s) 166
RsaI GTAC 1 cut(s) 872
RsaNI GTAC 1 cut(s) 871
RseI CAYNNNNRTG 3 cut(s) 50, 888, 941
SacI GAGCTC 1 cut(s) 583
SaqAI TTAA 1 cut(s) 689
SatI GCNGC 9 cut(s) 162, 180, 183, 333, 390, 418, 480, 912, 915
Sau3AI GATC 5 cut(s) 39, 166, 468, 751, 826
Sau96I GGNCC 1 cut(s) 897
SchI GAGTC 2 cut(s) 189, 605
ScrFI CCNGG 3 cut(s) 258, 495, 888
SduI GDGCHC 1 cut(s) 583
SetI ASST 6 cut(s) 11, 31, 181, 315, 583, 837
SfaNI GCATC 1 cut(s) 220
SfcI CTRYAG 1 cut(s) 979
SmiMI CAYNNNNRTG 3 cut(s) 50, 888, 941
SphI GCATGC 1 cut(s) 114
Sse9I AATT 4 cut(s) 90, 508, 715, 991
SseBI AGGCCT 1 cut(s) 709
SsiI CCGC 7 cut(s) 162, 332, 390, 417, 424, 441, 479
SstI GAGCTC 1 cut(s) 583
StuI AGGCCT 1 cut(s) 709
StyD4I CCNGG 3 cut(s) 256, 493, 886
StyI CCWWGG 2 cut(s) 301, 704
TaaI ACNGT 3 cut(s) 145, 212, 361
TaqI TCGA 2 cut(s) 512, 662
TasI AATT 4 cut(s) 90, 508, 715, 991
TatI WGTACW 1 cut(s) 870
TauI GCSGC 5 cut(s) 164, 335, 392, 420, 482
TfiI GAWTC 2 cut(s) 248, 725
Tru1I TTAA 1 cut(s) 689
Tru9I TTAA 1 cut(s) 689
TscAI CASTG 4 cut(s) 57, 415, 643, 850
TseFI GTSAC 3 cut(s) 61, 145, 565
TseI GCWGC 4 cut(s) 179, 182, 911, 914
Tsp45I GTSAC 3 cut(s) 61, 145, 565
TspDTI ATGAA 1 cut(s) 302
TspRI CASTG 4 cut(s) 57, 415, 643, 850
XapI RAATTY 1 cut(s) 715
XceI RCATGY 1 cut(s) 114
XcmI CCANNNNNNNNNTGG 1 cut(s) 943
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.