SAC3/GANP family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06290 AT3G06290 AT3G06290 AT3G06290 |
| fragaria_vesca | FvH4_4g13920 FvH4_4g13920 FvH4_4g13920 FvH4_4g13920 FvH4_4g13920 |
| malus_domestica | MD13G1178600.v1.1 MD16G1179800.v1.1 |
| prunus_persica | Prupe.1G147400_v2.0.a1 |
| pyrus_communis | pycom13g15420 pycom16g15090 |
| rosa_chinensis | RchiOBHm_Chr4g0419781 |
| rosa_laevigata | RLG00000007798 |
| rosa_multiflora | Rmu_sc0016868.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00362580 |
| rosa_rugosa | Rorug04G0160400 |
| rosa_samantha | Rh4AG221500 Rh4BG223500 Rh4CG234700 Rh4DG220600 |
| rosa_wichuraiana | Rw4G019060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 3506 |
| Acc36I | ACCTGC | 4 cut(s) | 1780, 1973, 3374, 4731 |
| Acc65I | GGTACC | 1 cut(s) | 4343 |
| AccB1I | GGYRCC | 1 cut(s) | 4343 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 2510, 2539, 3226, 3610 |
| AccI | GTMKAC | 4 cut(s) | 79, 2240, 4246, 4647 |
| AccII | CGCG | 1 cut(s) | 4257 |
| AclWI | GGATC | 9 cut(s) | 282, 772, 921, 1363, 1999, 2012, 2214, 2728, 3563 |
| AcoI | YGGCCR | 2 cut(s) | 381, 3343 |
| AcsI | RAATTY | 8 cut(s) | 67, 457, 685, 2769, 2971, 3394, 3796, 4566 |
| AcuI | CTGAAG | 4 cut(s) | 966, 1809, 2265, 2939 |
| AcvI | CACGTG | 2 cut(s) | 1844, 3773 |
| AcyI | GRCGYC | 2 cut(s) | 23, 3503 |
| AfeI | AGCGCT | 1 cut(s) | 1271 |
| AflII | CTTAAG | 1 cut(s) | 3541 |
| AflIII | ACRYGT | 2 cut(s) | 3770, 4222 |
| AhlI | ACTAGT | 1 cut(s) | 371 |
| AjnI | CCWGG | 7 cut(s) | 146, 312, 1753, 1959, 3310, 3340, 3912 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2284, 2316, 3788, 3820 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2896, 2928 |
| Alw21I | GWGCWC | 3 cut(s) | 1782, 3023, 4019 |
| Alw26I | GTCTC | 3 cut(s) | 526, 3312, 3605 |
| AlwI | GGATC | 9 cut(s) | 282, 772, 921, 1363, 1999, 2012, 2214, 2728, 3563 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 845 |
| Ama87I | CYCGRG | 3 cut(s) | 7, 795, 3956 |
| Aor51HI | AGCGCT | 1 cut(s) | 1271 |
| ApaI | GGGCCC | 1 cut(s) | 2126 |
| ApoI | RAATTY | 8 cut(s) | 67, 457, 685, 2769, 2971, 3394, 3796, 4566 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 3355, 3387, 4228, 4260 |
| AseI | ATTAAT | 2 cut(s) | 2781, 4040 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 261, 3780 |
| Asp718I | GGTACC | 1 cut(s) | 4343 |
| AspA2I | CCTAGG | 1 cut(s) | 476 |
| AspLEI | GCGC | 2 cut(s) | 1272, 4257 |
| AsuC2I | CCSGG | 3 cut(s) | 872, 994, 1205 |
| AsuNHI | GCTAGC | 1 cut(s) | 2032 |
| AvaI | CYCGRG | 3 cut(s) | 7, 795, 3956 |
| AvaII | GGWCC | 6 cut(s) | 152, 249, 1252, 3842, 4430, 4575 |
| AvrII | CCTAGG | 1 cut(s) | 476 |
| AxyI | CCTNAGG | 1 cut(s) | 909 |
| BaeGI | GKGCMC | 1 cut(s) | 2126 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2882, 2915, 3838, 3871 |
| BalI | TGGCCA | 1 cut(s) | 3345 |
| BamHI | GGATCC | 1 cut(s) | 2004 |
| BanI | GGYRCC | 1 cut(s) | 4343 |
| BanII | GRGCYC | 5 cut(s) | 668, 1782, 2126, 3717, 4019 |
| BauI | CACGAG | 3 cut(s) | 786, 4264, 4659 |
| BbrPI | CACGTG | 2 cut(s) | 1844, 3773 |
| BbsI | GAAGAC | 2 cut(s) | 1385, 1979 |
| Bbv12I | GWGCWC | 3 cut(s) | 1782, 3023, 4019 |
| BbvCI | CCTCAGC | 1 cut(s) | 2871 |
| BceAI | ACGGC | 2 cut(s) | 396, 2327 |
| BciT130I | CCWGG | 7 cut(s) | 148, 314, 1755, 1961, 3312, 3342, 3914 |
| BciVI | GTATCC | 2 cut(s) | 3470, 3866 |
| BclI | TGATCA | 6 cut(s) | 1258, 1672, 2815, 2851, 4450, 4633 |
| BcnI | CCSGG | 3 cut(s) | 872, 994, 1205 |
| BcoDI | GTCTC | 3 cut(s) | 526, 3312, 3605 |
| BcuI | ACTAGT | 1 cut(s) | 371 |
| BfmI | CTRYAG | 3 cut(s) | 1373, 1773, 4486 |
| BfoI | RGCGCY | 1 cut(s) | 1273 |
| BfrI | CTTAAG | 1 cut(s) | 3541 |
| BfuAI | ACCTGC | 4 cut(s) | 1780, 1973, 3374, 4731 |
| BfuI | GTATCC | 2 cut(s) | 3470, 3866 |
| BglII | AGATCT | 3 cut(s) | 419, 809, 2809 |
| BlnI | CCTAGG | 1 cut(s) | 476 |
| BlpI | GCTNAGC | 1 cut(s) | 1335 |
| BmcAI | AGTACT | 1 cut(s) | 784 |
| Bme18I | GGWCC | 6 cut(s) | 152, 249, 1252, 3842, 4430, 4575 |
| BmeT110I | CYCGRG | 3 cut(s) | 7, 795, 3956 |
| BmrI | ACTGGG | 2 cut(s) | 3215, 4398 |
| BmtI | GCTAGC | 1 cut(s) | 2036 |
| BmuI | ACTGGG | 2 cut(s) | 3215, 4398 |
| BpiI | GAAGAC | 2 cut(s) | 1385, 1979 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 880, 912 |
| BpmI | CTGGAG | 7 cut(s) | 1547, 2448, 2631, 2709, 2790, 4137, 4728 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2871, 2924 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1335 |
| BpuEI | CTTGAG | 6 cut(s) | 303, 450, 1564, 1721, 2987, 4271 |
| BpuMI | CCSGG | 3 cut(s) | 872, 994, 1205 |
| BsaAI | YACGTR | 2 cut(s) | 1844, 3773 |
| BsaBI | GATNNNNATC | 5 cut(s) | 537, 1287, 1367, 2814, 3291 |
| BsaHI | GRCGYC | 2 cut(s) | 23, 3503 |
| BsaI | GGTCTC | 2 cut(s) | 526, 3605 |
| BsaWI | WCCGGW | 1 cut(s) | 2773 |
| Bse1I | ACTGG | 9 cut(s) | 131, 774, 1873, 2726, 2993, 3210, 4322, 4338, 4404 |
| Bse21I | CCTNAGG | 1 cut(s) | 909 |
| Bse3DI | GCAATG | 4 cut(s) | 1153, 2684, 3561, 4473 |
| Bse8I | GATNNNNATC | 5 cut(s) | 537, 1287, 1367, 2814, 3291 |
| BseBI | CCWGG | 7 cut(s) | 148, 314, 1755, 1961, 3312, 3342, 3914 |
| BseJI | GATNNNNATC | 5 cut(s) | 537, 1287, 1367, 2814, 3291 |
| BseMI | GCAATG | 4 cut(s) | 1153, 2684, 3561, 4473 |
| BseMII | CTCAG | 9 cut(s) | 609, 900, 1326, 2862, 3008, 3730, 3933, 4032, 4127 |
| BseNI | ACTGG | 9 cut(s) | 131, 774, 1873, 2726, 2993, 3210, 4322, 4338, 4404 |
| BseRI | GAGGAG | 5 cut(s) | 565, 1599, 3229, 3974, 4136 |
| BseSI | GKGCMC | 1 cut(s) | 2126 |
| BseYI | CCCAGC | 2 cut(s) | 2338, 2586 |
| BsgI | GTGCAG | 1 cut(s) | 111 |
| Bsh1236I | CGCG | 1 cut(s) | 4257 |
| Bsh1285I | CGRYCG | 1 cut(s) | 509 |
| BshNI | GGYRCC | 1 cut(s) | 4343 |
| BsiEI | CGRYCG | 1 cut(s) | 509 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1782, 3023, 4019 |
| BsiHKCI | CYCGRG | 3 cut(s) | 7, 795, 3956 |
| BsiSI | CCGG | 4 cut(s) | 872, 994, 1205, 2774 |
| BsmAI | GTCTC | 3 cut(s) | 526, 3312, 3605 |
| BsmBI | CGTCTC | 1 cut(s) | 3312 |
| BsmI | GAATGC | 5 cut(s) | 175, 1494, 2662, 2685, 4687 |
| Bso31I | GGTCTC | 2 cut(s) | 526, 3605 |
| BsoBI | CYCGRG | 3 cut(s) | 7, 795, 3956 |
| Bsp120I | GGGCCC | 1 cut(s) | 2122 |
| Bsp1286I | GDGCHC | 6 cut(s) | 668, 1782, 2126, 3023, 3717, 4019 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1335 |
| Bsp19I | CCATGG | 2 cut(s) | 2561, 3239 |
| BspCNI | CTCAG | 9 cut(s) | 610, 901, 1327, 2863, 3009, 3729, 3934, 4031, 4128 |
| BspFNI | CGCG | 1 cut(s) | 4257 |
| BspMAI | CTGCAG | 2 cut(s) | 1377, 1777 |
| BspMI | ACCTGC | 4 cut(s) | 1780, 1973, 3374, 4731 |
| BspOI | GCTAGC | 1 cut(s) | 2036 |
| BspPI | GGATC | 9 cut(s) | 282, 772, 921, 1363, 1999, 2012, 2214, 2728, 3563 |
| BspT107I | GGYRCC | 1 cut(s) | 4343 |
| BspTI | CTTAAG | 1 cut(s) | 3541 |
| BspTNI | GGTCTC | 2 cut(s) | 526, 3605 |
| BsrDI | GCAATG | 4 cut(s) | 1153, 2684, 3561, 4473 |
| BsrI | ACTGG | 9 cut(s) | 131, 774, 1873, 2726, 2993, 3210, 4322, 4338, 4404 |
| BssNI | GRCGYC | 2 cut(s) | 23, 3503 |
| BssSI | CACGAG | 3 cut(s) | 786, 4264, 4659 |
| BssT1I | CCWWGG | 7 cut(s) | 476, 516, 975, 2561, 3239, 3464, 3876 |
| Bst2BI | CACGAG | 3 cut(s) | 786, 4264, 4659 |
| Bst2UI | CCWGG | 7 cut(s) | 148, 314, 1755, 1961, 3312, 3342, 3914 |
| Bst4CI | ACNGT | 8 cut(s) | 183, 2299, 2747, 3169, 3418, 3583, 4373, 4755 |
| Bst6I | CTCTTC | 6 cut(s) | 267, 429, 1026, 2040, 3747, 4545 |
| BstACI | GRCGYC | 2 cut(s) | 23, 3503 |
| BstAFI | CTTAAG | 1 cut(s) | 3541 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2963 |
| BstBAI | YACGTR | 2 cut(s) | 1844, 3773 |
| BstDSI | CCRYGG | 3 cut(s) | 252, 2561, 3239 |
| BstEII | GGTNACC | 1 cut(s) | 891 |
| BstFNI | CGCG | 1 cut(s) | 4257 |
| BstH2I | RGCGCY | 1 cut(s) | 1273 |
| BstHHI | GCGC | 2 cut(s) | 1272, 4257 |
| BstMAI | GTCTC | 3 cut(s) | 526, 3312, 3605 |
| BstMCI | CGRYCG | 1 cut(s) | 509 |
| BstNI | CCWGG | 7 cut(s) | 148, 314, 1755, 1961, 3312, 3342, 3914 |
| BstNSI | RCATGY | 6 cut(s) | 1303, 1926, 1937, 1982, 2662, 4226 |
| BstPI | GGTNACC | 1 cut(s) | 891 |
| BstSFI | CTRYAG | 3 cut(s) | 1373, 1773, 4486 |
| BstSLI | GKGCMC | 1 cut(s) | 2126 |
| BstUI | CGCG | 1 cut(s) | 4257 |
| BstV2I | GAAGAC | 2 cut(s) | 1385, 1979 |
| BstX2I | RGATCY | 8 cut(s) | 287, 419, 809, 2004, 2206, 2720, 2809, 3568 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 4411 |
| BstYI | RGATCY | 8 cut(s) | 287, 419, 809, 2004, 2206, 2720, 2809, 3568 |
| Bsu36I | CCTNAGG | 1 cut(s) | 909 |
| BsuI | GTATCC | 2 cut(s) | 3470, 3866 |
| BtgI | CCRYGG | 3 cut(s) | 252, 2561, 3239 |
| BtgZI | GCGATG | 1 cut(s) | 4272 |
| BtsIMutI | CAGTG | 5 cut(s) | 942, 3579, 4026, 4345, 4760 |
| BveI | ACCTGC | 4 cut(s) | 1780, 1973, 3374, 4731 |
| CaiI | CAGNNNCTG | 1 cut(s) | 845 |
| CfoI | GCGC | 2 cut(s) | 1272, 4257 |
| CseI | GACGC | 4 cut(s) | 12, 663, 1619, 3152 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3568, 3603 |
| DraI | TTTAAA | 1 cut(s) | 2581 |
| EaeI | YGGCCR | 2 cut(s) | 381, 3343 |
| Eam1104I | CTCTTC | 6 cut(s) | 267, 429, 1026, 2040, 3747, 4545 |
| EarI | CTCTTC | 6 cut(s) | 267, 429, 1026, 2040, 3747, 4545 |
| EciI | GGCGGA | 1 cut(s) | 109 |
| Ecl136II | GAGCTC | 2 cut(s) | 1780, 4017 |
| Eco130I | CCWWGG | 7 cut(s) | 476, 516, 975, 2561, 3239, 3464, 3876 |
| Eco147I | AGGCCT | 1 cut(s) | 733 |
| Eco24I | GRGCYC | 5 cut(s) | 668, 1782, 2126, 3717, 4019 |
| Eco31I | GGTCTC | 2 cut(s) | 526, 3605 |
| Eco47I | GGWCC | 6 cut(s) | 152, 249, 1252, 3842, 4430, 4575 |
| Eco47III | AGCGCT | 1 cut(s) | 1271 |
| Eco53kI | GAGCTC | 2 cut(s) | 1780, 4017 |
| Eco57I | CTGAAG | 4 cut(s) | 966, 1809, 2265, 2939 |
| Eco72I | CACGTG | 2 cut(s) | 1844, 3773 |
| Eco81I | CCTNAGG | 1 cut(s) | 909 |
| Eco88I | CYCGRG | 3 cut(s) | 7, 795, 3956 |
| Eco91I | GGTNACC | 1 cut(s) | 891 |
| EcoICRI | GAGCTC | 2 cut(s) | 1780, 4017 |
| EcoO109I | RGGNCCY | 4 cut(s) | 152, 1252, 2122, 4575 |
| EcoO65I | GGTNACC | 1 cut(s) | 891 |
| EcoRI | GAATTC | 2 cut(s) | 2971, 3796 |
| EcoRII | CCWGG | 7 cut(s) | 146, 312, 1753, 1959, 3310, 3340, 3912 |
| EcoT14I | CCWWGG | 7 cut(s) | 476, 516, 975, 2561, 3239, 3464, 3876 |
| EcoT22I | ATGCAT | 5 cut(s) | 1563, 1935, 2664, 4629, 4657 |
| EcoT38I | GRGCYC | 5 cut(s) | 668, 1782, 2126, 3717, 4019 |
| ErhI | CCWWGG | 7 cut(s) | 476, 516, 975, 2561, 3239, 3464, 3876 |
| Esp3I | CGTCTC | 1 cut(s) | 3312 |
| FauI | CCCGC | 1 cut(s) | 229 |
| FauNDI | CATATG | 1 cut(s) | 2305 |
| FbaI | TGATCA | 6 cut(s) | 1258, 1672, 2815, 2851, 4450, 4633 |
| FblI | GTMKAC | 4 cut(s) | 79, 2240, 4246, 4647 |
| FriOI | GRGCYC | 5 cut(s) | 668, 1782, 2126, 3717, 4019 |
| GlaI | GCGC | 2 cut(s) | 1271, 4256 |
| GsaI | CCCAGC | 2 cut(s) | 2342, 2590 |
| GsuI | CTGGAG | 7 cut(s) | 1547, 2448, 2631, 2709, 2790, 4137, 4728 |
| HaeII | RGCGCY | 1 cut(s) | 1273 |
| HapII | CCGG | 4 cut(s) | 872, 994, 1205, 2774 |
| HgaI | GACGC | 4 cut(s) | 12, 663, 1619, 3152 |
| HhaI | GCGC | 2 cut(s) | 1272, 4257 |
| Hin1I | GRCGYC | 2 cut(s) | 23, 3503 |
| Hin6I | GCGC | 2 cut(s) | 1270, 4255 |
| HinP1I | GCGC | 2 cut(s) | 1270, 4255 |
| HincII | GTYRAC | 2 cut(s) | 80, 4247 |
| HindII | GTYRAC | 2 cut(s) | 80, 4247 |
| HindIII | AAGCTT | 2 cut(s) | 2168, 4389 |
| HpaII | CCGG | 4 cut(s) | 872, 994, 1205, 2774 |
| Hpy166II | GTNNAC | 9 cut(s) | 80, 252, 2241, 2473, 3203, 3280, 3776, 4247, 4648 |
| Hpy8I | GTNNAC | 9 cut(s) | 80, 252, 2241, 2473, 3203, 3280, 3776, 4247, 4648 |
| Hpy99I | CGWCG | 1 cut(s) | 3287 |
| HpyCH4III | ACNGT | 8 cut(s) | 183, 2299, 2747, 3169, 3418, 3583, 4373, 4755 |
| HpyCH4IV | ACGT | 4 cut(s) | 1843, 3503, 3772, 4618 |
| HpySE526I | ACGT | 4 cut(s) | 1843, 3503, 3772, 4618 |
| Hsp92I | GRCGYC | 2 cut(s) | 23, 3503 |
| HspAI | GCGC | 2 cut(s) | 1270, 4255 |
| KflI | GGGWCCC | 2 cut(s) | 152, 4575 |
| KpnI | GGTACC | 1 cut(s) | 4347 |
| Ksp22I | TGATCA | 6 cut(s) | 1258, 1672, 2815, 2851, 4450, 4633 |
| LmnI | GCTCC | 8 cut(s) | 217, 1528, 3216, 3230, 3492, 3670, 4014, 4724 |
| MaeII | ACGT | 4 cut(s) | 1843, 3503, 3772, 4618 |
| MfeI | CAATTG | 2 cut(s) | 1383, 1661 |
| MflI | RGATCY | 8 cut(s) | 287, 419, 809, 2004, 2206, 2720, 2809, 3568 |
| MhlI | GDGCHC | 6 cut(s) | 668, 1782, 2126, 3023, 3717, 4019 |
| MlsI | TGGCCA | 1 cut(s) | 3345 |
| MluNI | TGGCCA | 1 cut(s) | 3345 |
| MlyI | GAGTC | 5 cut(s) | 249, 490, 1229, 2705, 4256 |
| MmeI | TCCRAC | 3 cut(s) | 529, 3140, 3786 |
| Mox20I | TGGCCA | 1 cut(s) | 3345 |
| Mph1103I | ATGCAT | 5 cut(s) | 1563, 1935, 2664, 4629, 4657 |
| MroXI | GAANNNNTTC | 2 cut(s) | 261, 3780 |
| MscI | TGGCCA | 1 cut(s) | 3345 |
| MslI | CAYNNNNRTG | 1 cut(s) | 705 |
| Msp20I | TGGCCA | 1 cut(s) | 3345 |
| MspA1I | CMGCKG | 1 cut(s) | 1334 |
| MspCI | CTTAAG | 1 cut(s) | 3541 |
| MspI | CCGG | 4 cut(s) | 872, 994, 1205, 2774 |
| MunI | CAATTG | 2 cut(s) | 1383, 1661 |
| Mva1269I | GAATGC | 5 cut(s) | 175, 1494, 2662, 2685, 4687 |
| MvaI | CCWGG | 7 cut(s) | 148, 314, 1755, 1961, 3312, 3342, 3914 |
| MvnI | CGCG | 1 cut(s) | 4257 |
| NciI | CCSGG | 3 cut(s) | 872, 994, 1205 |
| NcoI | CCATGG | 2 cut(s) | 2561, 3239 |
| NdeI | CATATG | 1 cut(s) | 2305 |
| NheI | GCTAGC | 1 cut(s) | 2032 |
| NmuCI | GTSAC | 5 cut(s) | 337, 482, 891, 3618, 3885 |
| NsiI | ATGCAT | 5 cut(s) | 1563, 1935, 2664, 4629, 4657 |
| NspI | RCATGY | 6 cut(s) | 1303, 1926, 1937, 1982, 2662, 4226 |
| PaeI | GCATGC | 3 cut(s) | 1926, 1937, 1982 |
| PaeR7I | CTCGAG | 1 cut(s) | 3956 |
| PasI | CCCWGGG | 1 cut(s) | 147 |
| PceI | AGGCCT | 1 cut(s) | 733 |
| PciI | ACATGT | 1 cut(s) | 4222 |
| PctI | GAATGC | 5 cut(s) | 175, 1494, 2662, 2685, 4687 |
| PdmI | GAANNNNTTC | 2 cut(s) | 261, 3780 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 2510, 2539, 3226, 3610 |
| PfoI | TCCNGGA | 1 cut(s) | 3912 |
| Ple19I | CGATCG | 1 cut(s) | 509 |
| PleI | GAGTC | 5 cut(s) | 248, 489, 1228, 2704, 4256 |
| PmaCI | CACGTG | 2 cut(s) | 1844, 3773 |
| PmlI | CACGTG | 2 cut(s) | 1844, 3773 |
| PpsI | GAGTC | 5 cut(s) | 248, 489, 1228, 2704, 4256 |
| Ppu21I | YACGTR | 2 cut(s) | 1844, 3773 |
| PpuMI | RGGWCCY | 3 cut(s) | 152, 1252, 4575 |
| PscI | ACATGT | 1 cut(s) | 4222 |
| PshBI | ATTAAT | 2 cut(s) | 2781, 4040 |
| Psp124BI | GAGCTC | 2 cut(s) | 1782, 4019 |
| Psp5II | RGGWCCY | 3 cut(s) | 152, 1252, 4575 |
| Psp6I | CCWGG | 7 cut(s) | 146, 312, 1753, 1959, 3310, 3340, 3912 |
| PspCI | CACGTG | 2 cut(s) | 1844, 3773 |
| PspEI | GGTNACC | 1 cut(s) | 891 |
| PspFI | CCCAGC | 2 cut(s) | 2338, 2586 |
| PspGI | CCWGG | 7 cut(s) | 146, 312, 1753, 1959, 3310, 3340, 3912 |
| PspOMI | GGGCCC | 1 cut(s) | 2122 |
| PspPPI | RGGWCCY | 3 cut(s) | 152, 1252, 4575 |
| PspXI | VCTCGAGB | 1 cut(s) | 3956 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 361, 393 |
| PstI | CTGCAG | 2 cut(s) | 1377, 1777 |
| PstNI | CAGNNNCTG | 1 cut(s) | 845 |
| PsuI | RGATCY | 8 cut(s) | 287, 419, 809, 2004, 2206, 2720, 2809, 3568 |
| PvuI | CGATCG | 1 cut(s) | 509 |
| PvuII | CAGCTG | 1 cut(s) | 1334 |
| RseI | CAYNNNNRTG | 1 cut(s) | 705 |
| SacI | GAGCTC | 2 cut(s) | 1782, 4019 |
| SalI | GTCGAC | 2 cut(s) | 78, 4245 |
| ScaI | AGTACT | 1 cut(s) | 784 |
| SchI | GAGTC | 5 cut(s) | 249, 490, 1229, 2705, 4256 |
| SduI | GDGCHC | 6 cut(s) | 668, 1782, 2126, 3023, 3717, 4019 |
| SfcI | CTRYAG | 3 cut(s) | 1373, 1773, 4486 |
| Sfr274I | CTCGAG | 1 cut(s) | 3956 |
| SinI | GGWCC | 6 cut(s) | 152, 249, 1252, 3842, 4430, 4575 |
| SlaI | CTCGAG | 1 cut(s) | 3956 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 705 |
| SmlI | CTYRAG | 8 cut(s) | 318, 465, 1579, 1736, 3002, 3541, 3956, 4250 |
| SmoI | CTYRAG | 8 cut(s) | 318, 465, 1579, 1736, 3002, 3541, 3956, 4250 |
| SpeI | ACTAGT | 1 cut(s) | 371 |
| SphI | GCATGC | 3 cut(s) | 1926, 1937, 1982 |
| SseBI | AGGCCT | 1 cut(s) | 733 |
| SspI | AATATT | 3 cut(s) | 1624, 2833, 4087 |
| SstI | GAGCTC | 2 cut(s) | 1782, 4019 |
| StuI | AGGCCT | 1 cut(s) | 733 |
| StyI | CCWWGG | 7 cut(s) | 476, 516, 975, 2561, 3239, 3464, 3876 |
| TaaI | ACNGT | 8 cut(s) | 183, 2299, 2747, 3169, 3418, 3583, 4373, 4755 |
| TaiI | ACGT | 4 cut(s) | 1846, 3506, 3775, 4621 |
| TaqI | TCGA | 9 cut(s) | 79, 136, 1407, 1717, 1891, 2098, 3957, 4246, 4534 |
| TaqII | GACCGA | 2 cut(s) | 1375, 3873 |
| TatI | WGTACW | 3 cut(s) | 3, 782, 3975 |
| TauI | GCSGC | 2 cut(s) | 2911, 3549 |
| TscAI | CASTG | 5 cut(s) | 949, 3586, 4026, 4345, 4760 |
| TseFI | GTSAC | 5 cut(s) | 337, 482, 891, 3618, 3885 |
| Tsp45I | GTSAC | 5 cut(s) | 337, 482, 891, 3618, 3885 |
| TspGWI | ACGGA | 5 cut(s) | 269, 1718, 2627, 2733, 3683 |
| TspRI | CASTG | 5 cut(s) | 949, 3586, 4026, 4345, 4760 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 2510, 2539, 3226, 3610 |
| Vha464I | CTTAAG | 1 cut(s) | 3541 |
| VpaK11BI | GGWCC | 6 cut(s) | 152, 249, 1252, 3842, 4430, 4575 |
| VspI | ATTAAT | 2 cut(s) | 2781, 4040 |
| XapI | RAATTY | 8 cut(s) | 67, 457, 685, 2769, 2971, 3394, 3796, 4566 |
| XbaI | TCTAGA | 1 cut(s) | 3193 |
| XceI | RCATGY | 6 cut(s) | 1303, 1926, 1937, 1982, 2662, 4226 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 4008 |
| XhoI | CTCGAG | 1 cut(s) | 3956 |
| XmaJI | CCTAGG | 1 cut(s) | 476 |
| XmiI | GTMKAC | 4 cut(s) | 79, 2240, 4246, 4647 |
| XmnI | GAANNNNTTC | 2 cut(s) | 261, 3780 |
| ZraI | GACGTC | 1 cut(s) | 3504 |
| ZrmI | AGTACT | 1 cut(s) | 784 |
| Zsp2I | ATGCAT | 5 cut(s) | 1563, 1935, 2664, 4629, 4657 |