Prupe.1G185400_v2.0.a1

1,4-beta-D-glucanase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
16848120 .. 16848848
729 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G185400.1

Sequence Viewer

Length: 618 bp
ATGTTTGCAACTGAAAGTTCAGACGTCAAGAATACAAATCATCTTTGCAAGAAGATATGTATCGCGTTGTTGAGCCTGTTCTTGATTGTTGGTGCTTACACCTGTTTCTTTATCGCGAACACAGGGTACATACAACCTGAATTTAGCATCACCGGTGCATATCTTAATCGATTCAATAATTATACCGAAATCAACCATACTCTCTCCTACAGTCTAGTCCTCAACATCACCCTCACAAACCCTAACAAGAAAGTGGACTTCGAGTCGAGTGACACCCAAGTCATTGCATACTATCAAAATGAGAGATTTGGTCTTGTGACTTTGATCGATAGGTGGAAATCGATTCACCAAGACCCCAAGAACACAACTATTTTTCAGAATGCCCTTATTCAAGGGCGGAAGCCTCTGCTGTATGAGGAACATGTGCTTCCCAATGTTACTCACCATTACCGTATTGACCTAATAATTGCTTTCCATGACAAGATTCAACAATCGTTTGCCGAGGTCACGTGCAACCTAACAGTTCCACTGAATTTTAATGTAACATCTTGTGATGGTTTCAACACAACAAAGTGCTACTATATTCAATTTACACTTGAGCATGACTTGGCTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

206

Amino Acids

23.59

Weight (kDa)

6.22

Isoelectric Point (pI)

22.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019801)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 278
AatII GACGTC 1 cut(s) 27
AccII CGCG 2 cut(s) 65, 116
AciI CCGC 1 cut(s) 397
AcsI RAATTY 2 cut(s) 140, 532
AcvI CACGTG 1 cut(s) 510
AcyI GRCGYC 1 cut(s) 24
AfaI GTAC 1 cut(s) 128
AflIII ACRYGT 1 cut(s) 421
AgeI ACCGGT 1 cut(s) 152
AgsI TTSAA 5 cut(s) 175, 392, 488, 562, 587
AhdI GACNNNNNGTC 1 cut(s) 262
ApoI RAATTY 2 cut(s) 140, 532
AsiGI ACCGGT 1 cut(s) 152
AsuHPI GGTGA 4 cut(s) 142, 220, 338, 434
BbrPI CACGTG 1 cut(s) 510
BccI CCATC 1 cut(s) 548
BfaI CTAG 1 cut(s) 215
BfmI CTRYAG 1 cut(s) 208
BmeRI GACNNNNNGTC 1 cut(s) 262
BmiI GGNNCC 1 cut(s) 612
BmsI GCATC 1 cut(s) 156
BpuEI CTTGAG 1 cut(s) 617
Bsa29I ATCGAT 3 cut(s) 169, 327, 341
BsaAI YACGTR 1 cut(s) 510
BsaBI GATNNNNATC 1 cut(s) 59
BsaHI GRCGYC 1 cut(s) 24
BsaJI CCNNGG 1 cut(s) 501
BsaWI WCCGGW 1 cut(s) 152
Bse118I RCCGGY 1 cut(s) 152
Bse3DI GCAATG 1 cut(s) 282
Bse8I GATNNNNATC 1 cut(s) 59
BseCI ATCGAT 3 cut(s) 169, 327, 341
BseDI CCNNGG 1 cut(s) 501
BseJI GATNNNNATC 1 cut(s) 59
BseMI GCAATG 1 cut(s) 282
Bsh1236I CGCG 2 cut(s) 65, 116
BshTI ACCGGT 1 cut(s) 152
BshVI ATCGAT 3 cut(s) 169, 327, 341
BsiSI CCGG 1 cut(s) 153
BsmI GAATGC 1 cut(s) 385
Bsp143I GATC 1 cut(s) 324
Bsp68I TCGCGA 1 cut(s) 116
BspACI CCGC 1 cut(s) 397
BspDI ATCGAT 3 cut(s) 169, 327, 341
BspFNI CGCG 2 cut(s) 65, 116
BspLI GGNNCC 1 cut(s) 612
BsrDI GCAATG 1 cut(s) 282
BsrFI RCCGGY 1 cut(s) 152
BssAI RCCGGY 1 cut(s) 152
BssECI CCNNGG 1 cut(s) 501
BssMI GATC 1 cut(s) 324
BssNI GRCGYC 1 cut(s) 24
Bst4CI ACNGT 3 cut(s) 212, 452, 523
BstACI GRCGYC 1 cut(s) 24
BstBAI YACGTR 1 cut(s) 510
BstFNI CGCG 2 cut(s) 65, 116
BstKTI GATC 1 cut(s) 327
BstMBI GATC 1 cut(s) 324
BstNSI RCATGY 1 cut(s) 425
BstSFI CTRYAG 1 cut(s) 208
BstUI CGCG 2 cut(s) 65, 116
Bsu15I ATCGAT 3 cut(s) 169, 327, 341
BsuTUI ATCGAT 3 cut(s) 169, 327, 341
BtsIMutI CAGTG 1 cut(s) 527
BtuMI TCGCGA 1 cut(s) 116
Cfr10I RCCGGY 1 cut(s) 152
ClaI ATCGAT 3 cut(s) 169, 327, 341
Csp6I GTAC 1 cut(s) 127
CspAI ACCGGT 1 cut(s) 152
CviAII CATG 3 cut(s) 422, 476, 602
CviJI RGCY 3 cut(s) 75, 403, 611
CviKI_1 RGCY 3 cut(s) 75, 403, 611
CviQI GTAC 1 cut(s) 127
DpnI GATC 1 cut(s) 326
DpnII GATC 1 cut(s) 324
DrdI GACNNNNNNGTC 1 cut(s) 278
DriI GACNNNNNGTC 1 cut(s) 262
DseDI GACNNNNNNGTC 1 cut(s) 278
Eam1105I GACNNNNNGTC 1 cut(s) 262
EciI GGCGGA 1 cut(s) 412
Eco72I CACGTG 1 cut(s) 510
FaeI CATG 3 cut(s) 425, 479, 605
FatI CATG 3 cut(s) 421, 475, 601
FspBI CTAG 1 cut(s) 215
HapII CCGG 1 cut(s) 153
Hin1I GRCGYC 1 cut(s) 24
Hin1II CATG 3 cut(s) 425, 479, 605
HinfI GANTC 4 cut(s) 171, 263, 343, 484
HpaII CCGG 1 cut(s) 153
HphI GGTGA 4 cut(s) 142, 220, 338, 434
Hpy166II GTNNAC 1 cut(s) 256
Hpy188I TCNGA 2 cut(s) 22, 378
Hpy188III TCNNGA 3 cut(s) 28, 82, 115
Hpy8I GTNNAC 1 cut(s) 256
HpyCH4III ACNGT 3 cut(s) 212, 452, 523
HpyCH4IV ACGT 2 cut(s) 24, 509
HpyCH4V TGCA 5 cut(s) 8, 48, 158, 287, 513
HpySE526I ACGT 2 cut(s) 24, 509
Hsp92I GRCGYC 1 cut(s) 24
Hsp92II CATG 3 cut(s) 425, 479, 605
Kzo9I GATC 1 cut(s) 324
LmnI GCTCC 1 cut(s) 616
LpnPI CCDG 5 cut(s) 89, 108, 115, 150, 166
LweI GCATC 1 cut(s) 156
MaeI CTAG 1 cut(s) 215
MaeII ACGT 2 cut(s) 24, 509
MaeIII GTNAC 5 cut(s) 269, 316, 436, 505, 541
MalI GATC 1 cut(s) 326
MboI GATC 1 cut(s) 324
MboII GAAGA 1 cut(s) 64
MluCI AATT 5 cut(s) 140, 178, 465, 532, 587
MlyI GAGTC 1 cut(s) 272
MnlI CCTC 5 cut(s) 230, 242, 409, 414, 496
MseI TTAA 3 cut(s) 165, 537, 616
MspI CCGG 1 cut(s) 153
Mva1269I GAATGC 1 cut(s) 385
MvnI CGCG 2 cut(s) 65, 116
NdeII GATC 1 cut(s) 324
NlaIII CATG 3 cut(s) 425, 479, 605
NlaIV GGNNCC 1 cut(s) 612
NmeAIII GCCGAG 1 cut(s) 526
NmuCI GTSAC 3 cut(s) 269, 316, 505
NruI TCGCGA 1 cut(s) 116
NspI RCATGY 1 cut(s) 425
PciI ACATGT 1 cut(s) 421
PctI GAATGC 1 cut(s) 385
PfeI GAWTC 3 cut(s) 171, 343, 484
PinAI ACCGGT 1 cut(s) 152
PleI GAGTC 1 cut(s) 271
PmaCI CACGTG 1 cut(s) 510
PmlI CACGTG 1 cut(s) 510
PpsI GAGTC 1 cut(s) 271
Ppu21I YACGTR 1 cut(s) 510
PscI ACATGT 1 cut(s) 421
PspCI CACGTG 1 cut(s) 510
PspN4I GGNNCC 1 cut(s) 612
PsrI GAACNNNNNNTAC 2 cut(s) 110, 142
RruI TCGCGA 1 cut(s) 116
RsaI GTAC 1 cut(s) 128
RsaNI GTAC 1 cut(s) 127
SaqAI TTAA 3 cut(s) 165, 537, 616
Sau3AI GATC 1 cut(s) 324
SchI GAGTC 1 cut(s) 272
SetI ASST 8 cut(s) 27, 104, 139, 335, 462, 507, 512, 519
SfaNI GCATC 1 cut(s) 156
SfcI CTRYAG 1 cut(s) 208
SgrAI CRCCGGYG 1 cut(s) 152
SmlI CTYRAG 1 cut(s) 596
SmoI CTYRAG 1 cut(s) 596
Sse9I AATT 5 cut(s) 140, 178, 465, 532, 587
SsiI CCGC 1 cut(s) 397
SspMI CTAG 1 cut(s) 215
TaaI ACNGT 3 cut(s) 212, 452, 523
TaiI ACGT 2 cut(s) 27, 512
TaqI TCGA 5 cut(s) 169, 261, 266, 327, 341
TasI AATT 5 cut(s) 140, 178, 465, 532, 587
TfiI GAWTC 3 cut(s) 171, 343, 484
Tru1I TTAA 3 cut(s) 165, 537, 616
Tru9I TTAA 3 cut(s) 165, 537, 616
TscAI CASTG 1 cut(s) 534
TseFI GTSAC 3 cut(s) 269, 316, 505
Tsp45I GTSAC 3 cut(s) 269, 316, 505
TspRI CASTG 1 cut(s) 534
XapI RAATTY 2 cut(s) 140, 532
XceI RCATGY 1 cut(s) 425
XspI CTAG 1 cut(s) 215
ZraI GACGTC 1 cut(s) 25
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.