Prupe.1G413200_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
36012497 .. 36013300
804 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G413200.1

Sequence Viewer

Length: 273 bp
ATGCTTATCTTACCCGATTCAATTACACTGAAACCAAGCATACTCTCTTCTACAACCTCTCTCTCACAAACCCTAACAAGGGACATCCGAGTCACTGCATACTATCAAAACAAAACATTTGGTCTTGTGAGTTTGGACCATAGGCATACAACGTTTCACCAAGACCCCAAGAACGCATCCATTTTTCGTAATGTAGTTTTTCAAGGATGGAAGGCTCTGGTGTTGGATGAACCTGTGCTTACCAATGCTGCTCACCTTACAGTAACGACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

91

Amino Acids

10.1

Weight (kDa)

9.3

Isoelectric Point (pI)

34.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019801)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 89
AclI AACGTT 1 cut(s) 152
AfiI CCNNNNNNNGG 2 cut(s) 78, 79
AgsI TTSAA 2 cut(s) 21, 203
ApeKI GCWGC 1 cut(s) 248
AspS9I GGNCC 1 cut(s) 136
AsuHPI GGTGA 2 cut(s) 149, 245
AvaII GGWCC 1 cut(s) 136
BbvI GCAGC 1 cut(s) 235
BccI CCATC 1 cut(s) 201
BfaI CTAG 1 cut(s) 271
BisI GCNGC 1 cut(s) 249
BlsI GCNGC 1 cut(s) 250
Bme18I GGWCC 1 cut(s) 136
BmgT120I GGNCC 1 cut(s) 136
BmsI GCATC 1 cut(s) 185
Bsc4I CCNNNNNNNGG 2 cut(s) 78, 79
BseGI GGATG 4 cut(s) 84, 176, 212, 232
BseLI CCNNNNNNNGG 2 cut(s) 78, 79
BseXI GCAGC 1 cut(s) 235
BslFI GGGAC 1 cut(s) 95
BslI CCNNNNNNNGG 2 cut(s) 78, 79
BsmFI GGGAC 1 cut(s) 95
Bst4CI ACNGT 1 cut(s) 262
Bst6I CTCTTC 1 cut(s) 52
BstF5I GGATG 4 cut(s) 84, 176, 212, 232
BstV1I GCAGC 1 cut(s) 235
BtsCI GGATG 4 cut(s) 84, 176, 212, 232
BtsI GCAGTG 1 cut(s) 93
BtsIMutI CAGTG 2 cut(s) 26, 93
Cfr13I GGNCC 1 cut(s) 136
CviJI RGCY 1 cut(s) 215
CviKI_1 RGCY 1 cut(s) 215
DrdI GACNNNNNNGTC 1 cut(s) 89
DseDI GACNNNNNNGTC 1 cut(s) 89
Eam1104I CTCTTC 1 cut(s) 52
EarI CTCTTC 1 cut(s) 52
Eco47I GGWCC 1 cut(s) 136
FaiI YATR 4 cut(s) 41, 100, 141, 147
FaqI GGGAC 1 cut(s) 95
Fnu4HI GCNGC 1 cut(s) 249
FokI GGATG 4 cut(s) 71, 163, 219, 239
Fsp4HI GCNGC 1 cut(s) 249
FspBI CTAG 1 cut(s) 271
GluI GCNGC 1 cut(s) 249
HinfI GANTC 2 cut(s) 17, 90
HphI GGTGA 2 cut(s) 149, 245
Hpy188I TCNGA 1 cut(s) 89
HpyAV CCTTC 1 cut(s) 205
HpyCH4III ACNGT 1 cut(s) 262
HpyCH4IV ACGT 1 cut(s) 152
HpyCH4V TGCA 1 cut(s) 98
HpySE526I ACGT 1 cut(s) 152
LpnPI CCDG 2 cut(s) 203, 246
Lsp1109I GCAGC 1 cut(s) 235
LweI GCATC 1 cut(s) 185
MaeI CTAG 1 cut(s) 271
MaeII ACGT 1 cut(s) 152
MaeIII GTNAC 2 cut(s) 91, 262
MboII GAAGA 1 cut(s) 39
MluCI AATT 1 cut(s) 21
MlyI GAGTC 1 cut(s) 99
MmeI TCCRAC 1 cut(s) 204
MnlI CCTC 1 cut(s) 67
NmuCI GTSAC 1 cut(s) 91
PfeI GAWTC 1 cut(s) 17
PkrI GCNGC 1 cut(s) 250
PleI GAGTC 1 cut(s) 98
PpsI GAGTC 1 cut(s) 98
Psp1406I AACGTT 1 cut(s) 152
PspPI GGNCC 1 cut(s) 136
SatI GCNGC 1 cut(s) 249
Sau96I GGNCC 1 cut(s) 136
SchI GAGTC 1 cut(s) 99
SetI ASST 5 cut(s) 59, 155, 235, 258, 272
SfaNI GCATC 1 cut(s) 185
SinI GGWCC 1 cut(s) 136
Sse9I AATT 1 cut(s) 21
SspMI CTAG 1 cut(s) 271
TaaI ACNGT 1 cut(s) 262
TaiI ACGT 1 cut(s) 155
TasI AATT 1 cut(s) 21
TfiI GAWTC 1 cut(s) 17
TscAI CASTG 2 cut(s) 33, 100
TseFI GTSAC 1 cut(s) 91
TseI GCWGC 1 cut(s) 248
Tsp45I GTSAC 1 cut(s) 91
TspDTI ATGAA 1 cut(s) 243
TspRI CASTG 2 cut(s) 33, 100
VpaK11BI GGWCC 1 cut(s) 136
XspI CTAG 1 cut(s) 271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.