Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0011284

Physical Location & Seq

Genomic Coordinates Reverse (-)

16862103 .. 16867139

Gene Structure 5037 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G185500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1281 bp

ATGGTCTGGTTTTTTCTATTTGTTAAAGTTGGTGGGTTTGGTTTCCTCCGTGGGTGTCAGCACGGATTTAATTACCAGCACAAGCGTGGTCTTGTGAATGTGAAGTTGAAATGGGTGAAAGATAGGGGATTGGATGCTGTCGTGACTGCTGAGAGAGATCTCAAAGCTGCCTGTATTCTTGTTTCCATTATCTCATCCTCACCTCAGTGCTGCCTCCCCATATACCGTCTCTCTTGCCATCGTGGACAACTCAGTCTTCCTTGTGATCTGAAGCTCTCCACTTTTATTAGGAAATTTCCTTCTGTTTTTGTTGAGTCCCACACATTTTGGAGTGGAGGTGCTCGTGTCCCATGCTTTAGCTTGACTCCTGAAGCCCTACAACTCTACCATGAGGAACTCAATGTCCTTCAGCAGAATCAGATGGATCTCATTAATAGGCTTCAAAAACTGCTCATGCTTACCCAGGGTTGGACCCTTCCTTTACAAACCCTTGACCAACTGAAATGGGACCTGGGCTTGCCATATGATTACCAGCACTCAGTCATTCCACATCACCCTGACCTATTCTCTTTCATCCGCCTCCCCGATGACCGTGTTGGCTTGAAGCTCTTATCCTGGGATGAGGACCTCGCTGTCTCCCAATTGCAAAAGAATTCTGCTATACAACAGAAGGAAGAAGATGCAAGAAGTGGCTGTTTAGCTTTTCCTGTTGGATTTACGAGGGGTTTTGGATTGAAGAGAAAATGCATGGAGTGGTTGAAAGAGTGGCAGACCCTCCCTTATACTTCGCCGTACTCTGATGCCTCTTATTTAGACCCTCGTACAGATGTATCGGAGAAGAGGATTGTAGGGGTTTTTCATGAGCTTCTTCAACTAACTATACACAAGAAAACTGAGCGTAAGAATGTGAGCAACCTTCGTAAACCTTTGGCCCTACCCCAGAAGTTCACTAAAGTGTTTGAGCGCCATCCAGGTATTTTCTACATTTCAAAAAAGTGTGCCACTCAAACTGTCATTCTAAGGGAAGCCTATAACCATCAACAACTCTTGCAAAAACACCCCACTGTAGATTTGAGGGAAAGATTTGCAAGGCTGTTAAGAAAAGGGCTCCTGGATAGGAGCAAAGGTTTATACAAGAAGAGTAAAGGTGATGGTGTAGAAGTGGATCCACATGTTGATGATATTGGTAATAACCAATCCAGTTCCGAAGAGGAGTCAGTTAACAAATTGTTTTATGAGTACGACTCTGATAAACCAGACGAACCTAGGATTCAGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PORR

Protein Analysis

427

Amino Acids

49.22

Weight (kDa)

9.05

Isoelectric Point (pI)

41.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011284)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48040
fragaria_vesca	FvH4_4g11610 FvH4_4g11610
malus_domestica	MD04G1034200.v1.1
prunus_persica	Prupe.1G185500_v2.0.a1 Prupe.1G185500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0408731
rosa_laevigata	RLG00000008635
rosa_multiflora	Rmu_sc0001258.1_g000007 Rmu_sc0006297.1_g000001
rosa_roxburghii	Rroxscaffold_5G00353080
rosa_rugosa	Rorug04G0087100 Rorug04G0087200
rosa_samantha	Rh1DG149800 Rh4AG151400 Rh4BG148600 Rh4CG159500 Rh4DG144600
rosa_wichuraiana	Rw0G015160 Rw4G012410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	252, 632
AciI	CCGC	1 cut(s)	577
AclWI	GGATC	3 cut(s)	432, 1160, 1173
AcsI	RAATTY	2 cut(s)	293, 652
AcuI	CTGAAG	3 cut(s)	290, 390, 392
AfaI	GTAC	3 cut(s)	794, 823, 1241
AfiI	CCNNNNNNNGG	1 cut(s)	468
AflIII	ACRYGT	1 cut(s)	1171
AgsI	TTSAA	7 cut(s)	109, 443, 604, 736, 760, 872, 990
AjnI	CCWGG	5 cut(s)	462, 510, 614, 970, 1110
AleI	CACNNNNGTG	3 cut(s)	84, 205, 953
AloI	GAACNNNNNNTCC	2 cut(s)	387, 419
AluBI	AGCT	6 cut(s)	167, 274, 360, 607, 701, 865
AluI	AGCT	6 cut(s)	167, 274, 360, 607, 701, 865
Alw21I	GWGCWC	1 cut(s)	343
Alw26I	GTCTC	2 cut(s)	233, 640
AlwI	GGATC	3 cut(s)	432, 1160, 1173
AoxI	GGCC	1 cut(s)	930
ApeKI	GCWGC	2 cut(s)	167, 210
ApoI	RAATTY	2 cut(s)	293, 652
AseI	ATTAAT	1 cut(s)	432
AspA2I	CCTAGG	1 cut(s)	1265
AspLEI	GCGC	1 cut(s)	966
AspS9I	GGNCC	4 cut(s)	471, 508, 625, 931
AsuHPI	GGTGA	4 cut(s)	127, 192, 545, 1160
AvaII	GGWCC	3 cut(s)	471, 508, 625
AvrII	CCTAGG	1 cut(s)	1265
BaeI	ACNNNNGTAYC	2 cut(s)	813, 846
BamHI	GGATCC	1 cut(s)	1165
BanII	GRGCYC	1 cut(s)	1110
BauI	CACGAG	1 cut(s)	342
BbsI	GAAGAC	1 cut(s)	248
Bbv12I	GWGCWC	1 cut(s)	343
BbvI	GCAGC	2 cut(s)	154, 197
BccI	CCATC	5 cut(s)	246, 415, 975, 1044, 1145
BceAI	ACGGC	1 cut(s)	775
BciT130I	CCWGG	5 cut(s)	464, 512, 616, 972, 1112
BcoDI	GTCTC	2 cut(s)	233, 640
BfaI	CTAG	1 cut(s)	1266
BfmI	CTRYAG	1 cut(s)	1065
BfoI	RGCGCY	1 cut(s)	967
BglII	AGATCT	1 cut(s)	157
BisI	GCNGC	2 cut(s)	168, 211
BlnI	CCTAGG	1 cut(s)	1265
BlsI	GCNGC	2 cut(s)	169, 212
Bme1390I	CCNGG	5 cut(s)	464, 512, 616, 972, 1112
Bme18I	GGWCC	3 cut(s)	471, 508, 625
BmgT120I	GGNCC	4 cut(s)	471, 508, 625, 931
BmiI	GGNNCC	4 cut(s)	473, 509, 1109, 1167
BmrFI	CCNGG	5 cut(s)	464, 512, 616, 972, 1112
BmsI	GCATC	3 cut(s)	124, 670, 790
BpiI	GAAGAC	1 cut(s)	248
BplI	GAGNNNNNCTC	2 cut(s)	1229, 1261
BsaJI	CCNNGG	6 cut(s)	49, 462, 463, 511, 615, 1265
BsaXI	ACNNNNNCTCC	4 cut(s)	322, 352, 1111, 1141
Bsc4I	CCNNNNNNNGG	1 cut(s)	468
Bse1I	ACTGG	1 cut(s)	1200
BseBI	CCWGG	5 cut(s)	464, 512, 616, 972, 1112
BseDI	CCNNGG	6 cut(s)	49, 462, 463, 511, 615, 1265
BseGI	GGATG	5 cut(s)	139, 194, 573, 625, 967
BseLI	CCNNNNNNNGG	1 cut(s)	468
BseMII	CTCAG	5 cut(s)	141, 218, 265, 552, 885
BseNI	ACTGG	1 cut(s)	1200
BseRI	GAGGAG	1 cut(s)	1226
BseXI	GCAGC	2 cut(s)	154, 197
BshFI	GGCC	1 cut(s)	932
BsiHKAI	GWGCWC	1 cut(s)	343
BslFI	GGGAC	3 cut(s)	301, 332, 521
BslI	CCNNNNNNNGG	1 cut(s)	468
BsmAI	GTCTC	2 cut(s)	233, 640
BsmBI	CGTCTC	1 cut(s)	233
BsmFI	GGGAC	3 cut(s)	301, 332, 521
BsnI	GGCC	1 cut(s)	932
Bsp1286I	GDGCHC	2 cut(s)	343, 1110
Bsp143I	GATC	4 cut(s)	157, 265, 424, 1165
BspACI	CCGC	1 cut(s)	577
BspANI	GGCC	1 cut(s)	932
BspCNI	CTCAG	5 cut(s)	142, 217, 264, 551, 886
BspHI	TCATGA	1 cut(s)	859
BspLI	GGNNCC	4 cut(s)	473, 509, 1109, 1167
BspPI	GGATC	3 cut(s)	432, 1160, 1173
BsrI	ACTGG	1 cut(s)	1200
BssECI	CCNNGG	6 cut(s)	49, 462, 463, 511, 615, 1265
BssMI	GATC	4 cut(s)	157, 265, 424, 1165
BssSI	CACGAG	1 cut(s)	342
BssT1I	CCWWGG	1 cut(s)	1265
Bst2BI	CACGAG	1 cut(s)	342
Bst2UI	CCWGG	5 cut(s)	464, 512, 616, 972, 1112
Bst4CI	ACNGT	4 cut(s)	227, 593, 1012, 1066
Bst6I	CTCTTC	4 cut(s)	731, 833, 1133, 1203
BstC8I	GCNNGC	1 cut(s)	518
BstDEI	CTNAG	6 cut(s)	150, 204, 251, 538, 894, 1019
BstDSI	CCRYGG	1 cut(s)	49
BstF5I	GGATG	5 cut(s)	139, 194, 573, 625, 967
BstH2I	RGCGCY	1 cut(s)	967
BstHHI	GCGC	1 cut(s)	966
BstKTI	GATC	4 cut(s)	160, 268, 427, 1168
BstMAI	GTCTC	2 cut(s)	233, 640
BstMBI	GATC	4 cut(s)	157, 265, 424, 1165
BstNI	CCWGG	5 cut(s)	464, 512, 616, 972, 1112
BstNSI	RCATGY	1 cut(s)	1175
BstSCI	CCNGG	5 cut(s)	462, 510, 614, 970, 1110
BstSFI	CTRYAG	1 cut(s)	1065
BstV1I	GCAGC	2 cut(s)	154, 197
BstV2I	GAAGAC	1 cut(s)	248
BstX2I	RGATCY	3 cut(s)	157, 424, 1165
BstYI	RGATCY	3 cut(s)	157, 424, 1165
BsuRI	GGCC	1 cut(s)	932
BtgI	CCRYGG	1 cut(s)	49
BtsCI	GGATG	5 cut(s)	139, 194, 573, 625, 967
BtsIMutI	CAGTG	2 cut(s)	212, 1062
Cac8I	GCNNGC	1 cut(s)	518
CciI	TCATGA	1 cut(s)	859
CfoI	GCGC	1 cut(s)	966
Cfr13I	GGNCC	4 cut(s)	471, 508, 625, 931
Csp6I	GTAC	3 cut(s)	793, 822, 1240
CspCI	CAANNNNNGTGG	2 cut(s)	308, 343
CviAII	CATG	6 cut(s)	351, 389, 454, 748, 860, 1172
CviQI	GTAC	3 cut(s)	793, 822, 1240
DdeI	CTNAG	6 cut(s)	150, 204, 251, 538, 894, 1019
DpnI	GATC	4 cut(s)	159, 267, 426, 1167
DpnII	GATC	4 cut(s)	157, 265, 424, 1165
DrdI	GACNNNNNNGTC	2 cut(s)	252, 632
DseDI	GACNNNNNNGTC	2 cut(s)	252, 632
Eam1104I	CTCTTC	4 cut(s)	731, 833, 1133, 1203
EarI	CTCTTC	4 cut(s)	731, 833, 1133, 1203
EciI	GGCGGA	1 cut(s)	566
Eco130I	CCWWGG	1 cut(s)	1265
Eco24I	GRGCYC	1 cut(s)	1110
Eco47I	GGWCC	3 cut(s)	471, 508, 625
Eco57I	CTGAAG	3 cut(s)	290, 390, 392
EcoO109I	RGGNCCY	2 cut(s)	508, 625
EcoRI	GAATTC	1 cut(s)	652
EcoRII	CCWGG	5 cut(s)	462, 510, 614, 970, 1110
EcoT14I	CCWWGG	1 cut(s)	1265
EcoT22I	ATGCAT	1 cut(s)	749
EcoT38I	GRGCYC	1 cut(s)	1110
ErhI	CCWWGG	1 cut(s)	1265
Esp3I	CGTCTC	1 cut(s)	233
FaeI	CATG	6 cut(s)	354, 392, 457, 751, 863, 1175
FaqI	GGGAC	3 cut(s)	301, 332, 521
FatI	CATG	6 cut(s)	350, 388, 453, 747, 859, 1171
FauNDI	CATATG	1 cut(s)	523
Fnu4HI	GCNGC	2 cut(s)	168, 211
FokI	GGATG	5 cut(s)	146, 181, 560, 632, 954
FriOI	GRGCYC	1 cut(s)	1110
Fsp4HI	GCNGC	2 cut(s)	168, 211
FspBI	CTAG	1 cut(s)	1266
GlaI	GCGC	1 cut(s)	965
GluI	GCNGC	2 cut(s)	168, 211
HaeII	RGCGCY	1 cut(s)	967
HaeIII	GGCC	1 cut(s)	932
HhaI	GCGC	1 cut(s)	966
Hin1II	CATG	6 cut(s)	354, 392, 457, 751, 863, 1175
Hin6I	GCGC	1 cut(s)	964
HinP1I	GCGC	1 cut(s)	964
HincII	GTYRAC	1 cut(s)	1222
HindII	GTYRAC	1 cut(s)	1222
HinfI	GANTC	6 cut(s)	314, 364, 415, 1214, 1244, 1270
HpaI	GTTAAC	1 cut(s)	1222
HphI	GGTGA	4 cut(s)	127, 192, 545, 1160
Hpy166II	GTNNAC	4 cut(s)	245, 923, 948, 1222
Hpy188I	TCNGA	6 cut(s)	270, 420, 799, 835, 1207, 1249
Hpy188III	TCNNGA	3 cut(s)	142, 368, 860
Hpy8I	GTNNAC	4 cut(s)	245, 923, 948, 1222
HpyAV	CCTTC	5 cut(s)	309, 416, 485, 664, 926
HpyCH4III	ACNGT	4 cut(s)	227, 593, 1012, 1066
HpyCH4V	TGCA	5 cut(s)	646, 683, 747, 1051, 1088
HpyF3I	CTNAG	6 cut(s)	150, 204, 251, 538, 894, 1019
Hsp92II	CATG	6 cut(s)	354, 392, 457, 751, 863, 1175
HspAI	GCGC	1 cut(s)	964
KspAI	GTTAAC	1 cut(s)	1222
Kzo9I	GATC	4 cut(s)	157, 265, 424, 1165
LmnI	GCTCC	2 cut(s)	1113, 1119
Lsp1109I	GCAGC	2 cut(s)	154, 197
LweI	GCATC	3 cut(s)	124, 670, 790
MaeI	CTAG	1 cut(s)	1266
MaeIII	GTNAC	1 cut(s)	142
MalI	GATC	4 cut(s)	159, 267, 426, 1167
MboI	GATC	4 cut(s)	157, 265, 424, 1165
MboII	GAAGA	8 cut(s)	248, 686, 689, 748, 850, 860, 1150, 1220
MfeI	CAATTG	1 cut(s)	641
MflI	RGATCY	3 cut(s)	157, 424, 1165
MhlI	GDGCHC	2 cut(s)	343, 1110
MluCI	AATT	5 cut(s)	70, 293, 641, 652, 1226
MlyI	GAGTC	4 cut(s)	323, 358, 1223, 1238
MmeI	TCCRAC	2 cut(s)	449, 691
Mph1103I	ATGCAT	1 cut(s)	749
MseI	TTAA	5 cut(s)	24, 69, 432, 1097, 1221
MslI	CAYNNNNRTG	4 cut(s)	84, 205, 953, 1176
MspR9I	CCNGG	5 cut(s)	464, 512, 616, 972, 1112
MunI	CAATTG	1 cut(s)	641
MvaI	CCWGG	5 cut(s)	464, 512, 616, 972, 1112
NdeI	CATATG	1 cut(s)	523
NdeII	GATC	4 cut(s)	157, 265, 424, 1165
NlaIII	CATG	6 cut(s)	354, 392, 457, 751, 863, 1175
NlaIV	GGNNCC	4 cut(s)	473, 509, 1109, 1167
NmuCI	GTSAC	1 cut(s)	142
NsiI	ATGCAT	1 cut(s)	749
NspI	RCATGY	1 cut(s)	1175
OliI	CACNNNNGTG	3 cut(s)	84, 205, 953
PagI	TCATGA	1 cut(s)	859
PasI	CCCWGGG	1 cut(s)	463
PciI	ACATGT	1 cut(s)	1171
PfeI	GAWTC	2 cut(s)	415, 1270
PfoI	TCCNGGA	1 cut(s)	1110
PkrI	GCNGC	2 cut(s)	169, 212
PleI	GAGTC	4 cut(s)	322, 358, 1222, 1238
PpsI	GAGTC	4 cut(s)	322, 358, 1222, 1238
PpuMI	RGGWCCY	2 cut(s)	508, 625
PscI	ACATGT	1 cut(s)	1171
PshBI	ATTAAT	1 cut(s)	432
Psp5II	RGGWCCY	2 cut(s)	508, 625
Psp6I	CCWGG	5 cut(s)	462, 510, 614, 970, 1110
PspGI	CCWGG	5 cut(s)	462, 510, 614, 970, 1110
PspN4I	GGNNCC	4 cut(s)	473, 509, 1109, 1167
PspPI	GGNCC	4 cut(s)	471, 508, 625, 931
PspPPI	RGGWCCY	2 cut(s)	508, 625
PsuI	RGATCY	3 cut(s)	157, 424, 1165
RsaI	GTAC	3 cut(s)	794, 823, 1241
RsaNI	GTAC	3 cut(s)	793, 822, 1240
RseI	CAYNNNNRTG	4 cut(s)	84, 205, 953, 1176
SaqAI	TTAA	5 cut(s)	24, 69, 432, 1097, 1221
SatI	GCNGC	2 cut(s)	168, 211
Sau3AI	GATC	4 cut(s)	157, 265, 424, 1165
Sau96I	GGNCC	4 cut(s)	471, 508, 625, 931
SchI	GAGTC	4 cut(s)	323, 358, 1223, 1238
ScrFI	CCNGG	5 cut(s)	464, 512, 616, 972, 1112
SduI	GDGCHC	2 cut(s)	343, 1110
SfaNI	GCATC	3 cut(s)	124, 670, 790
SfcI	CTRYAG	1 cut(s)	1065
SinI	GGWCC	3 cut(s)	471, 508, 625
SmiMI	CAYNNNNRTG	4 cut(s)	84, 205, 953, 1176
Sse9I	AATT	5 cut(s)	70, 293, 641, 652, 1226
SsiI	CCGC	1 cut(s)	577
SspMI	CTAG	1 cut(s)	1266
StyD4I	CCNGG	5 cut(s)	462, 510, 614, 970, 1110
StyI	CCWWGG	1 cut(s)	1265
TaaI	ACNGT	4 cut(s)	227, 593, 1012, 1066
TasI	AATT	5 cut(s)	70, 293, 641, 652, 1226
TfiI	GAWTC	2 cut(s)	415, 1270
Tru1I	TTAA	5 cut(s)	24, 69, 432, 1097, 1221
Tru9I	TTAA	5 cut(s)	24, 69, 432, 1097, 1221
TscAI	CASTG	2 cut(s)	212, 1069
TseFI	GTSAC	1 cut(s)	142
TseI	GCWGC	2 cut(s)	167, 210
Tsp45I	GTSAC	1 cut(s)	142
TspDTI	ATGAA	2 cut(s)	562, 848
TspGWI	ACGGA	2 cut(s)	38, 78
TspRI	CASTG	2 cut(s)	212, 1069
VpaK11BI	GGWCC	3 cut(s)	471, 508, 625
VspI	ATTAAT	1 cut(s)	432
XapI	RAATTY	2 cut(s)	293, 652
XceI	RCATGY	1 cut(s)	1175
XcmI	CCANNNNNNNNNTGG	1 cut(s)	83
XmaJI	CCTAGG	1 cut(s)	1265
XspI	CTAG	1 cut(s)	1266
Zsp2I	ATGCAT	1 cut(s)	749

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.