Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0017204

Physical Location & Seq

Genomic Coordinates Reverse (-)

18067522 .. 18068366

Gene Structure 845 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G193000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 795 bp

ATGGCAACCAAGTCTTTCGAATCCATATGCCACAATCACCACTCACTCCTCAACCACCACCACCACACAGAGATAGCTCCTTCCACACTCTCCTCCACTCTCTTCCTCAAACCCACCACCACAAACACCCCAAACACCATAAGCATTTCTTCTCTCTCCTCCACCAAAACCTTCTCAATCTCACCCACCACTTCACTCTCCACACCCTCCTCCACCCAAGCCATCTCCTTTGACCTCCTACAGCAGCACCTCTCCACCCAAAACTTCCGTGAAGCGGACGAAGAAACCCGCCGCCTCCTCATCGTCCTGGCCGGAGAACAAGCCCAGAAGCGAGGCTACGTCTTCTTCTCCGAGGCCCAGTTCATCTCAGAAGCCGACCTCAAGGCCATTGACGACCTCTGGAGGCAGCACAGCAACAACAAATTTGGGTACAGCGTCCAGAGAAAAATATATGGCAAAGTGAGCAATGACTTCACCAAATTCTTCATTAAGGTTGGGTGGATGAAGAAGCTGGACACAGAAGTTGAGCAATACAACTACAGAGCCTTCCCCAATGAGTTCATCTGGGAGCTCAACGAGGACACACCAGAAGGCCATCTGCCATTGACGAATGCTTTGAGAGGAACCCAGCTGCTCAAAAGCATTTTAGAACATCCAGCTTTCAAGCCCACAGAGGAAGAGCTGCTTCAGGCCAAGGCTGCAGGTGAAGACATGGGCAATGGAGTTACAGGGTTGAAAGGGTTCATGGATGGCTCCAAAAGCAAAAGAGTGCTCAAATCAGACTATAGCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006779 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009987 GO:0010019 GO:0015994 GO:0015995 GO:0018130 GO:0019438 GO:0019899 GO:0023052 GO:0033013 GO:0033014 GO:0034641 GO:0042440 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044093 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046148 GO:0046483 GO:0046906 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051186 GO:0051188 GO:0051716 GO:0065007 GO:0065009 GO:0071704 GO:0097159 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GUN4

Protein Analysis

265

Amino Acids

29.83

Weight (kDa)

6.6

Isoelectric Point (pI)

31.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017204)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59400
fragaria_vesca	FvH4_4g10790
malus_domestica	MD04G1040300.v1.1
prunus_persica	Prupe.1G193000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0406801
rosa_laevigata	RLG00000008758
rosa_multiflora	Rmu_sc0006408.1_g000008
rosa_roxburghii	Rroxscaffold_5G00351580
rosa_rugosa	Rorug04G0073400
rosa_samantha	Rh4AG140700 Rh4CG147600 Rh4DG134700
rosa_wichuraiana	Rw4G011450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	692
Acc36I	ACCTGC	1 cut(s)	692
AciI	CCGC	3 cut(s)	275, 289, 292
AcoI	YGGCCR	1 cut(s)	309
AcsI	RAATTY	2 cut(s)	422, 479
AcuI	CTGAAG	1 cut(s)	671
AfaI	GTAC	1 cut(s)	431
AfiI	CCNNNNNNNGG	1 cut(s)	274
AgsI	TTSAA	2 cut(s)	664, 736
AjnI	CCWGG	1 cut(s)	306
AluBI	AGCT	7 cut(s)	77, 511, 571, 631, 659, 682, 789
AluI	AGCT	7 cut(s)	77, 511, 571, 631, 659, 682, 789
Alw21I	GWGCWC	2 cut(s)	573, 774
AoxI	GGCC	5 cut(s)	309, 354, 384, 592, 690
ApeKI	GCWGC	5 cut(s)	244, 406, 631, 682, 698
ApoI	RAATTY	2 cut(s)	422, 479
ArsI	GACNNNNNNTTYG	2 cut(s)	598, 630
Asp700I	GAANNNNTTC	1 cut(s)	740
AspS9I	GGNCC	1 cut(s)	355
AsuHPI	GGTGA	4 cut(s)	29, 174, 466, 716
AsuII	TTCGAA	1 cut(s)	18
BanII	GRGCYC	1 cut(s)	573
BarI	GAAGNNNNNNTAC	2 cut(s)	320, 352
BbsI	GAAGAC	2 cut(s)	334, 714
Bbv12I	GWGCWC	2 cut(s)	573, 774
BbvI	GCAGC	5 cut(s)	256, 418, 618, 669, 685
BccI	CCATC	3 cut(s)	230, 603, 743
BciT130I	CCWGG	1 cut(s)	308
BfmI	CTRYAG	4 cut(s)	239, 538, 699, 784
BfuAI	ACCTGC	1 cut(s)	692
BisI	GCNGC	6 cut(s)	245, 292, 407, 632, 683, 699
BlsI	GCNGC	6 cut(s)	246, 293, 408, 633, 684, 700
Bme1390I	CCNGG	1 cut(s)	308
BmgT120I	GGNCC	1 cut(s)	355
BmiI	GGNNCC	2 cut(s)	625, 754
BmrFI	CCNGG	1 cut(s)	308
BmrI	ACTGGG	1 cut(s)	352
BmuI	ACTGGG	1 cut(s)	352
BpiI	GAAGAC	2 cut(s)	334, 714
BpmI	CTGGAG	1 cut(s)	421
Bpu14I	TTCGAA	1 cut(s)	18
BpuEI	CTTGAG	1 cut(s)	365
BsaJI	CCNNGG	2 cut(s)	351, 693
Bsc4I	CCNNNNNNNGG	1 cut(s)	274
Bse1I	ACTGG	1 cut(s)	358
Bse3DI	GCAATG	2 cut(s)	472, 724
BseBI	CCWGG	1 cut(s)	308
BseDI	CCNNGG	2 cut(s)	351, 693
BseGI	GGATG	3 cut(s)	507, 652, 754
BseLI	CCNNNNNNNGG	1 cut(s)	274
BseMI	GCAATG	2 cut(s)	472, 724
BseMII	CTCAG	1 cut(s)	381
BseNI	ACTGG	1 cut(s)	358
BseRI	GAGGAG	5 cut(s)	38, 82, 148, 199, 287
BseXI	GCAGC	5 cut(s)	256, 418, 618, 669, 685
BseYI	CCCAGC	1 cut(s)	627
BshFI	GGCC	5 cut(s)	311, 356, 386, 594, 692
BsiHKAI	GWGCWC	2 cut(s)	573, 774
BsiSI	CCGG	1 cut(s)	312
BslI	CCNNNNNNNGG	1 cut(s)	274
BsmI	GAATGC	1 cut(s)	616
BsnI	GGCC	5 cut(s)	311, 356, 386, 594, 692
Bsp119I	TTCGAA	1 cut(s)	18
Bsp1286I	GDGCHC	2 cut(s)	573, 774
BspACI	CCGC	3 cut(s)	275, 289, 292
BspANI	GGCC	5 cut(s)	311, 356, 386, 594, 692
BspCNI	CTCAG	1 cut(s)	380
BspLI	GGNNCC	2 cut(s)	625, 754
BspMAI	CTGCAG	1 cut(s)	703
BspMI	ACCTGC	1 cut(s)	692
BspQI	GCTCTTC	1 cut(s)	672
BspT104I	TTCGAA	1 cut(s)	18
BsrDI	GCAATG	2 cut(s)	472, 724
BsrI	ACTGG	1 cut(s)	358
BssECI	CCNNGG	2 cut(s)	351, 693
BssT1I	CCWWGG	1 cut(s)	693
Bst2UI	CCWGG	1 cut(s)	308
Bst6I	CTCTTC	2 cut(s)	107, 672
BstBI	TTCGAA	1 cut(s)	18
BstDEI	CTNAG	1 cut(s)	367
BstF5I	GGATG	3 cut(s)	507, 652, 754
BstMWI	GCNNNNNNNGC	3 cut(s)	462, 698, 759
BstNI	CCWGG	1 cut(s)	308
BstSCI	CCNGG	1 cut(s)	306
BstSFI	CTRYAG	4 cut(s)	239, 538, 699, 784
BstV1I	GCAGC	5 cut(s)	256, 418, 618, 669, 685
BstV2I	GAAGAC	2 cut(s)	334, 714
BsuRI	GGCC	5 cut(s)	311, 356, 386, 594, 692
BtsCI	GGATG	3 cut(s)	507, 652, 754
BveI	ACCTGC	1 cut(s)	692
Cfr13I	GGNCC	1 cut(s)	355
CseI	GACGC	1 cut(s)	424
Csp6I	GTAC	1 cut(s)	430
CviAII	CATG	2 cut(s)	712, 745
CviQI	GTAC	1 cut(s)	430
DdeI	CTNAG	1 cut(s)	367
EaeI	YGGCCR	1 cut(s)	309
Eam1104I	CTCTTC	2 cut(s)	107, 672
EarI	CTCTTC	2 cut(s)	107, 672
Ecl136II	GAGCTC	1 cut(s)	571
Eco130I	CCWWGG	1 cut(s)	693
Eco24I	GRGCYC	1 cut(s)	573
Eco53kI	GAGCTC	1 cut(s)	571
Eco57I	CTGAAG	1 cut(s)	671
EcoICRI	GAGCTC	1 cut(s)	571
EcoRII	CCWGG	1 cut(s)	306
EcoT14I	CCWWGG	1 cut(s)	693
EcoT38I	GRGCYC	1 cut(s)	573
ErhI	CCWWGG	1 cut(s)	693
FaeI	CATG	2 cut(s)	715, 748
FaiI	YATR	8 cut(s)	26, 28, 140, 451, 453, 713, 746, 786
FalI	AAGNNNNNCTT	4 cut(s)	133, 165, 669, 701
FatI	CATG	2 cut(s)	711, 744
FauI	CCCGC	1 cut(s)	296
FauNDI	CATATG	1 cut(s)	26
Fnu4HI	GCNGC	6 cut(s)	245, 292, 407, 632, 683, 699
FokI	GGATG	3 cut(s)	514, 639, 761
FriOI	GRGCYC	1 cut(s)	573
Fsp4HI	GCNGC	6 cut(s)	245, 292, 407, 632, 683, 699
GluI	GCNGC	6 cut(s)	245, 292, 407, 632, 683, 699
GsaI	CCCAGC	1 cut(s)	631
GsuI	CTGGAG	1 cut(s)	421
HaeIII	GGCC	5 cut(s)	311, 356, 386, 594, 692
HapII	CCGG	1 cut(s)	312
HgaI	GACGC	1 cut(s)	424
Hin1II	CATG	2 cut(s)	715, 748
HinfI	GANTC	1 cut(s)	20
HpaII	CCGG	1 cut(s)	312
HphI	GGTGA	4 cut(s)	29, 174, 466, 716
Hpy188I	TCNGA	3 cut(s)	352, 370, 781
Hpy188III	TCNNGA	2 cut(s)	400, 439
HpyAV	CCTTC	4 cut(s)	90, 181, 556, 584
HpyCH4IV	ACGT	1 cut(s)	339
HpyCH4V	TGCA	1 cut(s)	701
HpyF10VI	GCNNNNNNNGC	3 cut(s)	462, 698, 759
HpyF3I	CTNAG	1 cut(s)	367
HpySE526I	ACGT	1 cut(s)	339
Hsp92II	CATG	2 cut(s)	715, 748
LguI	GCTCTTC	1 cut(s)	672
LmnI	GCTCC	3 cut(s)	82, 568, 758
Lsp1109I	GCAGC	5 cut(s)	256, 418, 618, 669, 685
MaeII	ACGT	1 cut(s)	339
MaeIII	GTNAC	1 cut(s)	724
MboII	GAAGA	9 cut(s)	94, 141, 293, 334, 337, 475, 517, 689, 719
MhlI	GDGCHC	2 cut(s)	573, 774
MluCI	AATT	2 cut(s)	422, 479
MroXI	GAANNNNTTC	1 cut(s)	740
MseI	TTAA	1 cut(s)	489
MspA1I	CMGCKG	1 cut(s)	631
MspI	CCGG	1 cut(s)	312
MspR9I	CCNGG	1 cut(s)	308
Mva1269I	GAATGC	1 cut(s)	616
MvaI	CCWGG	1 cut(s)	308
MwoI	GCNNNNNNNGC	3 cut(s)	462, 698, 759
NdeI	CATATG	1 cut(s)	26
NlaIII	CATG	2 cut(s)	715, 748
NlaIV	GGNNCC	2 cut(s)	625, 754
NspV	TTCGAA	1 cut(s)	18
PaqCI	CACCTGC	1 cut(s)	692
PciSI	GCTCTTC	1 cut(s)	672
PctI	GAATGC	1 cut(s)	616
PdmI	GAANNNNTTC	1 cut(s)	740
PfeI	GAWTC	1 cut(s)	20
PkrI	GCNGC	6 cut(s)	246, 293, 408, 633, 684, 700
Psp124BI	GAGCTC	1 cut(s)	573
Psp6I	CCWGG	1 cut(s)	306
PspFI	CCCAGC	1 cut(s)	627
PspGI	CCWGG	1 cut(s)	306
PspN4I	GGNNCC	2 cut(s)	625, 754
PspPI	GGNCC	1 cut(s)	355
PstI	CTGCAG	1 cut(s)	703
PvuII	CAGCTG	1 cut(s)	631
RsaI	GTAC	1 cut(s)	431
RsaNI	GTAC	1 cut(s)	430
SacI	GAGCTC	1 cut(s)	573
SapI	GCTCTTC	1 cut(s)	672
SaqAI	TTAA	1 cut(s)	489
SatI	GCNGC	6 cut(s)	245, 292, 407, 632, 683, 699
Sau96I	GGNCC	1 cut(s)	355
ScrFI	CCNGG	1 cut(s)	308
SduI	GDGCHC	2 cut(s)	573, 774
SfcI	CTRYAG	4 cut(s)	239, 538, 699, 784
SfuI	TTCGAA	1 cut(s)	18
SmlI	CTYRAG	1 cut(s)	380
SmoI	CTYRAG	1 cut(s)	380
Sse9I	AATT	2 cut(s)	422, 479
SsiI	CCGC	3 cut(s)	275, 289, 292
SstI	GAGCTC	1 cut(s)	573
StyD4I	CCNGG	1 cut(s)	306
StyI	CCWWGG	1 cut(s)	693
TaiI	ACGT	1 cut(s)	342
TaqI	TCGA	1 cut(s)	18
TasI	AATT	2 cut(s)	422, 479
TauI	GCSGC	1 cut(s)	294
TfiI	GAWTC	1 cut(s)	20
Tru1I	TTAA	1 cut(s)	489
Tru9I	TTAA	1 cut(s)	489
TseI	GCWGC	5 cut(s)	244, 406, 631, 682, 698
TspDTI	ATGAA	5 cut(s)	352, 475, 518, 550, 733
TspGWI	ACGGA	1 cut(s)	257
XapI	RAATTY	2 cut(s)	422, 479
XmnI	GAANNNNTTC	1 cut(s)	740

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.