Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0004734

Physical Location & Seq

Genomic Coordinates Reverse (-)

22514290 .. 22518561

Gene Structure 4272 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G212100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGCAGAGAAAGTGGTGAGCCTGAGAGAAGGGGAGGCAGAGTTAACGAACCAGCACCTGAAGGAGAGAAAGGCGTCATGGGCTAAGTTGCGCCGCGTGGACTCTCTCAGTTTAGAGGCTGGAAGAGTTTCCACGACCCGGAGCCATGGCTCACAGGTAAGTTGGCAAAGAACGTTGAGTTTGGCCTTTCAGAGCATAGGGATTGTGTATGGGGACATAGGGACGTCTCCACTCTATGTGTTTTCGAGCACTTTCACAGATGGTATTGACAACGTCGATGACATTCTAGGGGTATTGTCTCTCATCATCTATACCATAGCTCTCGTGCCCATGCTCAAGTATGTCTTCATCGTCCTCTGGGCCAACGATAACGGCGATGGGGGAACGTTTGCACTGTATTCATTGATGTGTCGGTATGCGAAGGTGAGCTTAATTCCGAATAACCAGCCAGAAGATAGGGAGCTATCCAACTACAAACTGGAAACACCATCCAACGAGTTAAAACGAGCCCAAACCATCAAGAAGAAGTTGGAGAATAGTAAGATGGCACAATACGTTCTTTTCCTTGTGACCATTATGGGAACTTCCATGGTCATTGGAGATGGGGTTCTTACTCCATGCATTTCAGTCCTTTCTGCAGTGAGCGGGATTAAGTCTTTAGGCACAGATGCTGTTGTGGGGATTTCCATAGTAATCTTGATCGTTCTCTTTGCTGCTCAACGATTTGGGACTGATAAAGTGGGCTACACCTTTGCACCCATCATTCTGCTGTGGTTCTTGCTCATCAGCGGCATTGGTCTCTACAACTTGTTCAAACATGACGTTGGTGTATTGCGTGCTTTCAACCCAAAATACATCATAGATTTCTTCAAAAGAAATGGGAAAAAAGGATGGGTTTCCCTTGGGGGAGTTTTCCTCTGCATTACTGGGACTGAGGCCATGTTTGCTGATTTGGGTCACTTCAATGTCAAAGCAATCCAAATCAGTTTCTCTTGCATCACATTTCCTGCATTAATAACTGCATATAGTGGGCAAGCAGCATTCCTCAGAAAGTTCCCAGGGAAGGTGGAGCACACATTCTATGACTCAATACCAGACCCTTTGTATTGGCCAACTTTCGTCATTGCCGTAGCTGCTGCTATTATTGCCAGTCAGGCTATGATATCTGGGGCATTTTCAATCATCTCCCAGTCCCTAAGTTTGGGTTGTTTCCCGAGAGTTAAGGTTGTTCATACCTCTGCCAAGTATGAGGGTCAGGTGTACATACCTGAGATCAACTACCTGCTTATGGTTGCTTGTGTTATAGTCACTGCAGCATTCAAGACCACCGGAAAGATTGGCAACGCATATGGAATTGCTGTGGTTAGTGTTATGGTCATCACAACATGTTTGCTTACTCTCATTATGTTGGTGATATGGAAGACGAGCATATGGTTGATTGCTCTGTTCTTTGTGGTGTTCATCTCCATCGAGGTGGTTTATTCATCCGCCGTGCTGTACAAATTTGCGCAAGGCGGTTTCCTTCCTCTGGTCTTTGCTTCTCTCCTTATGGCAATCATGGGGATTTGGCATTATGTGCACAAACAAAAATACATGTTTGAGCTCAACAACAAGGTTTCCACAGAATACATGAAACAATTGGCCTGTAACCCCAACATAAATAGGGTGCCAGGCATTGGACTTCTATATTCTGAGCTTGTGCAGGGAATTCCCCCTATATTTTCTCACTTTGTCAACAATGTACCCTCCATCCACTCTGTTATAGTGATTGTCTCCATCAAGCCTATCCCATTCAGCAAAGTTGCATTGGAGGAGAGGTTTCTGTTTCGACAGTTGGAGCCAAGAGAGTACAGAATGTTCCGCTGTGTAGCAAGGTATGGTTACAATGACAGAGTTGAGGAACCTGAAGAGTTCGAGCGCCAACTGGTTGAGAACTTGAAAGAATTCATCCGCCACGAAGTTCACGAACACTTCGTACTTGATGGAGGAGTGACAGAGAAGACAGAGGAGGCAAGGAAAGATGGGGAGTCATTCAATGGTGAAGAATCAGCACAACAAGTTAACCCGCCTCGGGTCTCAACAGGGTCCATTCAGTCATTCAATGCTGCGAGGTCGGTGAACTCATCCAGCAGAATTGTCTCTGCACCCATCAAAGGAGCTGAGGAGGAAATTCAGTTTGTGCAAGGAGCTATGAAGGACGGCATAGTTTATCTGCTGGGAGAGACAGAAGTGTTGGCCGCACAGAACTCGTCATTGTTCAAGAAGTTTGTTGTCAACTATGCCTACGATTTCTTGAGGAAAAACTTCAGGCAAGGGGAACAAGTCATGGCAATCCCAAGGACTAGGCTTCTCAAAGTTGGAATGACGTATGAGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0008150 GO:0008324 GO:0009674 GO:0009987 GO:0010107 GO:0015075 GO:0015077 GO:0015079 GO:0015081 GO:0015291 GO:0015293 GO:0015294 GO:0015318 GO:0015370 GO:0015672 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0035725 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

793

Amino Acids

88.26

Weight (kDa)

8.81

Isoelectric Point (pI)

27.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004734)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13420
fragaria_vesca	FvH4_4g22240 FvH4_4g22240 FvH4_4g22260
malus_domestica	MD13G1133100.v1.1 MD13G1133200.v1.1 MD16G1143900.v1.1
prunus_persica	Prupe.1G212100_v2.0.a1 Prupe.1G212200_v2.0.a1
pyrus_communis	pycom13g11630
rosa_chinensis	RchiOBHm_Chr4g0428481 RchiOBHm_Chr4g0428501
rosa_laevigata	RLG00000007145 RLG00000007146
rosa_multiflora	Rmu_sc0002072.1_g000037 Rmu_sc0004623.1_g000012 Rmu_sc0006844.1_g000008
rosa_roxburghii	Rroxscaffold_5G00370180 Rroxscaffold_5G00370210
rosa_rugosa	Rorug04G0225500 Rorug04G0225600
rosa_samantha	Rh4AG283100 Rh4AG283200 Rh4BG288800 Rh4BG288900 Rh4CG304400 Rh4CG304900 Rh4DG285900 Rh4DG286000
rosa_wichuraiana	Rw4G024580 Rw4G024600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	227
Acc16I	TGCGCA	1 cut(s)	1509
Acc36I	ACCTGC	1 cut(s)	1290
AccB1I	GGYRCC	1 cut(s)	1666
AccB7I	CCANNNNNTGG	1 cut(s)	1676
AccBSI	CCGCTC	1 cut(s)	645
AccII	CGCG	1 cut(s)	96
AciI	CCGC	9 cut(s)	94, 645, 789, 1488, 1515, 1861, 1951, 2066, 2238
AclI	AACGTT	2 cut(s)	173, 386
AcoI	YGGCCR	2 cut(s)	1109, 2235
AcsI	RAATTY	4 cut(s)	1502, 1707, 1943, 2169
AcuI	CTGAAG	3 cut(s)	80, 1926, 2290
AcyI	GRCGYC	2 cut(s)	74, 224
AfaI	GTAC	5 cut(s)	1262, 1499, 1743, 1850, 1977
AfiI	CCNNNNNNNGG	8 cut(s)	138, 1063, 1201, 1288, 1528, 1676, 2071, 2153
AflIII	ACRYGT	2 cut(s)	1385, 1593
AjnI	CCWGG	2 cut(s)	1057, 1669
AloI	GAACNNNNNNTCC	2 cut(s)	591, 623
AluBI	AGCT	8 cut(s)	320, 429, 463, 1133, 1603, 1696, 2159, 2189
AluI	AGCT	8 cut(s)	320, 429, 463, 1133, 1603, 1696, 2159, 2189
Alw21I	GWGCWC	4 cut(s)	251, 1074, 1581, 1605
Alw26I	GTCTC	7 cut(s)	231, 303, 803, 1777, 2080, 2143, 2216
Alw44I	GTGCAC	1 cut(s)	1577
AlwNI	CAGNNNCTG	2 cut(s)	58, 671
Ama87I	CYCGRG	2 cut(s)	1213, 2070
AoxI	GGCC	6 cut(s)	183, 360, 936, 1109, 1641, 2235
ApaLI	GTGCAC	1 cut(s)	1577
ApeKI	GCWGC	6 cut(s)	713, 1037, 1133, 1136, 1313, 2105
ApoI	RAATTY	4 cut(s)	1502, 1707, 1943, 2169
AseI	ATTAAT	1 cut(s)	1013
Asp700I	GAANNNNTTC	3 cut(s)	127, 1943, 2303
AspLEI	GCGC	3 cut(s)	93, 1510, 1920
AspS9I	GGNCC	2 cut(s)	360, 2085
AsuC2I	CCSGG	1 cut(s)	139
AsuHPI	GGTGA	5 cut(s)	28, 436, 1423, 2051, 2128
AvaI	CYCGRG	2 cut(s)	1213, 2070
AvaII	GGWCC	1 cut(s)	2085
BaeGI	GKGCMC	2 cut(s)	330, 1581
BalI	TGGCCA	1 cut(s)	1111
BanI	GGYRCC	1 cut(s)	1666
BanII	GRGCYC	2 cut(s)	511, 1605
BauI	CACGAG	1 cut(s)	323
BbsI	GAAGAC	3 cut(s)	337, 1427, 2006
Bbv12I	GWGCWC	4 cut(s)	251, 1074, 1581, 1605
BbvCI	CCTCAGC	1 cut(s)	2160
BbvI	GCAGC	6 cut(s)	700, 1049, 1120, 1123, 1325, 2092
BceAI	ACGGC	4 cut(s)	388, 1112, 1475, 2215
BcgI	CGANNNNNNTGC	2 cut(s)	2229, 2263
BciT130I	CCWGG	2 cut(s)	1059, 1671
BcnI	CCSGG	1 cut(s)	139
BcoDI	GTCTC	7 cut(s)	231, 303, 803, 1777, 2080, 2143, 2216
BfaI	CTAG	2 cut(s)	287, 2343
BfmI	CTRYAG	2 cut(s)	636, 1311
BfoI	RGCGCY	1 cut(s)	1921
BfuAI	ACCTGC	1 cut(s)	1290
BglI	GCCNNNNNGGC	1 cut(s)	1154
BisI	GCNGC	9 cut(s)	94, 714, 790, 1038, 1134, 1137, 1314, 2106, 2238
BlsI	GCNGC	9 cut(s)	95, 715, 791, 1039, 1135, 1138, 1315, 2107, 2239
Bme1390I	CCNGG	3 cut(s)	139, 1059, 1671
Bme18I	GGWCC	1 cut(s)	2085
BmeT110I	CYCGRG	2 cut(s)	1213, 2070
BmgT120I	GGNCC	2 cut(s)	360, 2085
BmiI	GGNNCC	5 cut(s)	143, 1668, 1839, 1902, 2086
BmrFI	CCNGG	3 cut(s)	139, 1059, 1671
BmrI	ACTGGG	2 cut(s)	936, 1183
BmsI	GCATC	2 cut(s)	658, 1005
BmuI	ACTGGG	2 cut(s)	936, 1183
BpiI	GAAGAC	3 cut(s)	337, 1427, 2006
BplI	GAGNNNNNCTC	2 cut(s)	900, 932
Bpu10I	CCTNAGC	1 cut(s)	2160
BpuEI	CTTGAG	2 cut(s)	320, 2314
BpuMI	CCSGG	1 cut(s)	139
BsaHI	GRCGYC	2 cut(s)	74, 224
BsaI	GGTCTC	2 cut(s)	803, 2080
BsaJI	CCNNGG	7 cut(s)	145, 588, 901, 1057, 1058, 2069, 2336
BsaWI	WCCGGW	1 cut(s)	1328
BsaXI	ACNNNNNCTCC	6 cut(s)	26, 56, 591, 621, 1802, 1832
Bsc4I	CCNNNNNNNGG	8 cut(s)	138, 1063, 1201, 1288, 1528, 1676, 2071, 2153
Bse1I	ACTGG	5 cut(s)	483, 931, 1149, 1189, 1929
Bse3DI	GCAATG	1 cut(s)	1122
BseBI	CCWGG	2 cut(s)	1059, 1671
BseDI	CCNNGG	7 cut(s)	145, 588, 901, 1057, 1058, 2069, 2336
BseGI	GGATG	6 cut(s)	488, 896, 1484, 1749, 1947, 2123
BseLI	CCNNNNNNNGG	8 cut(s)	138, 1063, 1201, 1288, 1528, 1676, 2071, 2153
BseMI	GCAATG	1 cut(s)	1122
BseMII	CTCAG	7 cut(s)	14, 121, 924, 1060, 1260, 1683, 2151
BseNI	ACTGG	5 cut(s)	483, 931, 1149, 1189, 1929
BseRI	GAGGAG	4 cut(s)	1826, 2001, 2021, 2177
BseSI	GKGCMC	2 cut(s)	330, 1581
BseXI	GCAGC	6 cut(s)	700, 1049, 1120, 1123, 1325, 2092
BseYI	CCCAGC	1 cut(s)	2215
BsgI	GTGCAG	2 cut(s)	1721, 2127
Bsh1236I	CGCG	1 cut(s)	96
BshFI	GGCC	6 cut(s)	185, 362, 938, 1111, 1643, 2237
BshNI	GGYRCC	1 cut(s)	1666
BsiHKAI	GWGCWC	4 cut(s)	251, 1074, 1581, 1605
BsiHKCI	CYCGRG	2 cut(s)	1213, 2070
BsiSI	CCGG	2 cut(s)	139, 1329
BslFI	GGGAC	5 cut(s)	227, 235, 742, 943, 1177
BslI	CCNNNNNNNGG	8 cut(s)	138, 1063, 1201, 1288, 1528, 1676, 2071, 2153
BsmAI	GTCTC	7 cut(s)	231, 303, 803, 1777, 2080, 2143, 2216
BsmBI	CGTCTC	1 cut(s)	231
BsmFI	GGGAC	5 cut(s)	227, 235, 742, 943, 1177
BsmI	GAATGC	2 cut(s)	1040, 1316
BsnI	GGCC	6 cut(s)	185, 362, 938, 1111, 1643, 2237
Bso31I	GGTCTC	2 cut(s)	803, 2080
BsoBI	CYCGRG	2 cut(s)	1213, 2070
Bsp1286I	GDGCHC	6 cut(s)	251, 330, 511, 1074, 1581, 1605
Bsp1407I	TGTACA	2 cut(s)	1260, 1497
Bsp143I	GATC	2 cut(s)	699, 1272
Bsp19I	CCATGG	2 cut(s)	145, 588
BspACI	CCGC	9 cut(s)	94, 645, 789, 1488, 1515, 1861, 1951, 2066, 2238
BspANI	GGCC	6 cut(s)	185, 362, 938, 1111, 1643, 2237
BspCNI	CTCAG	7 cut(s)	15, 120, 925, 1059, 1261, 1684, 2152
BspFNI	CGCG	1 cut(s)	96
BspLI	GGNNCC	5 cut(s)	143, 1668, 1839, 1902, 2086
BspMAI	CTGCAG	2 cut(s)	640, 1315
BspMI	ACCTGC	1 cut(s)	1290
BspT107I	GGYRCC	1 cut(s)	1666
BspTNI	GGTCTC	2 cut(s)	803, 2080
BsrBI	CCGCTC	1 cut(s)	645
BsrDI	GCAATG	1 cut(s)	1122
BsrGI	TGTACA	2 cut(s)	1260, 1497
BsrI	ACTGG	5 cut(s)	483, 931, 1149, 1189, 1929
BssECI	CCNNGG	7 cut(s)	145, 588, 901, 1057, 1058, 2069, 2336
BssMI	GATC	2 cut(s)	699, 1272
BssNI	GRCGYC	2 cut(s)	74, 224
BssSI	CACGAG	1 cut(s)	323
BssT1I	CCWWGG	4 cut(s)	145, 588, 901, 2336
Bst2BI	CACGAG	1 cut(s)	323
Bst2UI	CCWGG	2 cut(s)	1059, 1671
Bst4CI	ACNGT	2 cut(s)	396, 1833
Bst6I	CTCTTC	2 cut(s)	118, 1902
BstACI	GRCGYC	2 cut(s)	74, 224
BstAPI	GCANNNNNTGC	1 cut(s)	1576
BstAUI	TGTACA	2 cut(s)	1260, 1497
BstC8I	GCNNGC	2 cut(s)	837, 1035
BstDEI	CTNAG	9 cut(s)	23, 84, 107, 933, 1046, 1196, 1269, 1692, 2160
BstDSI	CCRYGG	2 cut(s)	145, 588
BstF5I	GGATG	6 cut(s)	488, 896, 1484, 1749, 1947, 2123
BstFNI	CGCG	1 cut(s)	96
BstH2I	RGCGCY	1 cut(s)	1921
BstHHI	GCGC	3 cut(s)	93, 1510, 1920
BstKTI	GATC	2 cut(s)	702, 1275
BstMAI	GTCTC	7 cut(s)	231, 303, 803, 1777, 2080, 2143, 2216
BstMBI	GATC	2 cut(s)	699, 1272
BstMWI	GCNNNNNNNGC	6 cut(s)	80, 944, 1133, 1145, 1154, 1576
BstNI	CCWGG	2 cut(s)	1059, 1671
BstNSI	RCATGY	2 cut(s)	1389, 1597
BstSCI	CCNGG	3 cut(s)	137, 1057, 1669
BstSFI	CTRYAG	2 cut(s)	636, 1311
BstSLI	GKGCMC	2 cut(s)	330, 1581
BstUI	CGCG	1 cut(s)	96
BstV1I	GCAGC	6 cut(s)	700, 1049, 1120, 1123, 1325, 2092
BstV2I	GAAGAC	3 cut(s)	337, 1427, 2006
BstXI	CCANNNNNNTGG	1 cut(s)	1474
BsuRI	GGCC	6 cut(s)	185, 362, 938, 1111, 1643, 2237
BtgI	CCRYGG	2 cut(s)	145, 588
BtgZI	GCGATG	1 cut(s)	390
BtsCI	GGATG	6 cut(s)	488, 896, 1484, 1749, 1947, 2123
BtsI	GCAGTG	2 cut(s)	645, 1308
BtsIMutI	CAGTG	3 cut(s)	392, 645, 1308
BveI	ACCTGC	1 cut(s)	1290
Cac8I	GCNNGC	2 cut(s)	837, 1035
CaiI	CAGNNNCTG	2 cut(s)	58, 671
CfoI	GCGC	3 cut(s)	93, 1510, 1920
Cfr13I	GGNCC	2 cut(s)	360, 2085
CseI	GACGC	1 cut(s)	63
Csp6I	GTAC	5 cut(s)	1261, 1498, 1742, 1849, 1976
CviQI	GTAC	5 cut(s)	1261, 1498, 1742, 1849, 1976
DdeI	CTNAG	9 cut(s)	23, 84, 107, 933, 1046, 1196, 1269, 1692, 2160
DpnI	GATC	2 cut(s)	701, 1274
DpnII	GATC	2 cut(s)	699, 1272
EaeI	YGGCCR	2 cut(s)	1109, 2235
Eam1104I	CTCTTC	2 cut(s)	118, 1902
EarI	CTCTTC	2 cut(s)	118, 1902
EciI	GGCGGA	2 cut(s)	1477, 1940
Ecl136II	GAGCTC	1 cut(s)	1603
Eco130I	CCWWGG	4 cut(s)	145, 588, 901, 2336
Eco24I	GRGCYC	2 cut(s)	511, 1605
Eco31I	GGTCTC	2 cut(s)	803, 2080
Eco32I	GATATC	1 cut(s)	1164
Eco47I	GGWCC	1 cut(s)	2085
Eco53kI	GAGCTC	1 cut(s)	1603
Eco57I	CTGAAG	3 cut(s)	80, 1926, 2290
Eco88I	CYCGRG	2 cut(s)	1213, 2070
EcoICRI	GAGCTC	1 cut(s)	1603
EcoRI	GAATTC	2 cut(s)	1707, 1943
EcoRII	CCWGG	2 cut(s)	1057, 1669
EcoRV	GATATC	1 cut(s)	1164
EcoT14I	CCWWGG	4 cut(s)	145, 588, 901, 2336
EcoT22I	ATGCAT	1 cut(s)	623
EcoT38I	GRGCYC	2 cut(s)	511, 1605
ErhI	CCWWGG	4 cut(s)	145, 588, 901, 2336
Esp3I	CGTCTC	1 cut(s)	231
FalI	AAGNNNNNCTT	4 cut(s)	329, 361, 413, 445
FaqI	GGGAC	5 cut(s)	227, 235, 742, 943, 1177
FauI	CCCGC	2 cut(s)	638, 2073
FauNDI	CATATG	2 cut(s)	1348, 1430
Fnu4HI	GCNGC	9 cut(s)	94, 714, 790, 1038, 1134, 1137, 1314, 2106, 2238
FokI	GGATG	6 cut(s)	475, 903, 1471, 1736, 1934, 2110
FriOI	GRGCYC	2 cut(s)	511, 1605
Fsp4HI	GCNGC	9 cut(s)	94, 714, 790, 1038, 1134, 1137, 1314, 2106, 2238
FspBI	CTAG	2 cut(s)	287, 2343
FspI	TGCGCA	1 cut(s)	1509
GlaI	GCGC	3 cut(s)	92, 1509, 1919
GluI	GCNGC	9 cut(s)	94, 714, 790, 1038, 1134, 1137, 1314, 2106, 2238
GsaI	CCCAGC	1 cut(s)	2219
HaeII	RGCGCY	1 cut(s)	1921
HaeIII	GGCC	6 cut(s)	185, 362, 938, 1111, 1643, 2237
HapII	CCGG	2 cut(s)	139, 1329
HgaI	GACGC	1 cut(s)	63
HhaI	GCGC	3 cut(s)	93, 1510, 1920
Hin1I	GRCGYC	2 cut(s)	74, 224
Hin6I	GCGC	3 cut(s)	91, 1508, 1918
HinP1I	GCGC	3 cut(s)	91, 1508, 1918
HincII	GTYRAC	4 cut(s)	45, 1735, 2062, 2275
HindII	GTYRAC	4 cut(s)	45, 1735, 2062, 2275
HinfI	GANTC	4 cut(s)	101, 1085, 2027, 2045
HpaI	GTTAAC	2 cut(s)	45, 2062
HpaII	CCGG	2 cut(s)	139, 1329
HphI	GGTGA	5 cut(s)	28, 436, 1423, 2051, 2128
Hpy166II	GTNNAC	9 cut(s)	45, 100, 1261, 1579, 1735, 1963, 2062, 2119, 2275
Hpy188I	TCNGA	4 cut(s)	192, 438, 1049, 1693
Hpy188III	TCNNGA	7 cut(s)	520, 697, 1213, 1321, 1964, 2260, 2293
Hpy8I	GTNNAC	9 cut(s)	45, 100, 1261, 1579, 1735, 1963, 2062, 2119, 2275
Hpy99I	CGWCG	1 cut(s)	278
HpyAV	CCTTC	6 cut(s)	23, 55, 415, 1057, 1532, 2188
HpyCH4III	ACNGT	2 cut(s)	396, 1833
HpyCH4IV	ACGT	7 cut(s)	173, 224, 273, 386, 555, 822, 2366
HpyF10VI	GCNNNNNNNGC	6 cut(s)	80, 944, 1133, 1145, 1154, 1576
HpyF3I	CTNAG	9 cut(s)	23, 84, 107, 933, 1046, 1196, 1269, 1692, 2160
HpySE526I	ACGT	7 cut(s)	173, 224, 273, 386, 555, 822, 2366
Hsp92I	GRCGYC	2 cut(s)	74, 224
HspAI	GCGC	3 cut(s)	91, 1508, 1918
KspAI	GTTAAC	2 cut(s)	45, 2062
Kzo9I	GATC	2 cut(s)	699, 1272
LmnI	GCTCC	6 cut(s)	141, 460, 1069, 1837, 2156, 2186
Lsp1109I	GCAGC	6 cut(s)	700, 1049, 1120, 1123, 1325, 2092
LweI	GCATC	2 cut(s)	658, 1005
MaeI	CTAG	2 cut(s)	287, 2343
MaeII	ACGT	7 cut(s)	173, 224, 273, 386, 555, 822, 2366
MaeIII	GTNAC	6 cut(s)	568, 956, 1306, 1646, 1880, 1990
MalI	GATC	2 cut(s)	701, 1274
MbiI	CCGCTC	1 cut(s)	645
MboI	GATC	2 cut(s)	699, 1272
MboII	GAAGA	9 cut(s)	135, 337, 464, 535, 859, 1432, 1919, 2011, 2054
MfeI	CAATTG	1 cut(s)	1637
MhlI	GDGCHC	6 cut(s)	251, 330, 511, 1074, 1581, 1605
MlsI	TGGCCA	1 cut(s)	1111
MluCI	AATT	8 cut(s)	432, 1353, 1502, 1637, 1707, 1943, 2133, 2169
MluNI	TGGCCA	1 cut(s)	1111
MlyI	GAGTC	3 cut(s)	95, 1079, 2036
MmeI	TCCRAC	5 cut(s)	492, 510, 516, 1815, 2338
Mox20I	TGGCCA	1 cut(s)	1111
Mph1103I	ATGCAT	1 cut(s)	623
MroXI	GAANNNNTTC	3 cut(s)	127, 1943, 2303
MscI	TGGCCA	1 cut(s)	1111
MseI	TTAA	7 cut(s)	44, 431, 500, 651, 1013, 1221, 2061
MslI	CAYNNNNRTG	3 cut(s)	406, 963, 1472
Msp20I	TGGCCA	1 cut(s)	1111
MspA1I	CMGCKG	2 cut(s)	789, 1863
MspI	CCGG	2 cut(s)	139, 1329
MspR9I	CCNGG	3 cut(s)	139, 1059, 1671
MunI	CAATTG	1 cut(s)	1637
Mva1269I	GAATGC	2 cut(s)	1040, 1316
MvaI	CCWGG	2 cut(s)	1059, 1671
MvnI	CGCG	1 cut(s)	96
MwoI	GCNNNNNNNGC	6 cut(s)	80, 944, 1133, 1145, 1154, 1576
NciI	CCSGG	1 cut(s)	139
NcoI	CCATGG	2 cut(s)	145, 588
NdeI	CATATG	2 cut(s)	1348, 1430
NdeII	GATC	2 cut(s)	699, 1272
NlaIV	GGNNCC	5 cut(s)	143, 1668, 1839, 1902, 2086
NmuCI	GTSAC	4 cut(s)	568, 956, 1306, 1990
NsbI	TGCGCA	1 cut(s)	1509
NsiI	ATGCAT	1 cut(s)	623
NspI	RCATGY	2 cut(s)	1389, 1597
PasI	CCCWGGG	1 cut(s)	1058
PciI	ACATGT	2 cut(s)	1385, 1593
PcsI	WCGNNNNNNNCGW	4 cut(s)	372, 1125, 1962, 1971
PctI	GAATGC	2 cut(s)	1040, 1316
PdmI	GAANNNNTTC	3 cut(s)	127, 1943, 2303
PfeI	GAWTC	1 cut(s)	2045
PflFI	GACNNNGTC	1 cut(s)	272
PflMI	CCANNNNNTGG	1 cut(s)	1676
PkrI	GCNGC	9 cut(s)	95, 715, 791, 1039, 1135, 1138, 1315, 2107, 2239
PleI	GAGTC	3 cut(s)	95, 1079, 2035
PpsI	GAGTC	3 cut(s)	95, 1079, 2035
PscI	ACATGT	2 cut(s)	1385, 1593
PshBI	ATTAAT	1 cut(s)	1013
Psp124BI	GAGCTC	1 cut(s)	1605
Psp1406I	AACGTT	2 cut(s)	173, 386
Psp6I	CCWGG	2 cut(s)	1057, 1669
PspFI	CCCAGC	1 cut(s)	2215
PspGI	CCWGG	2 cut(s)	1057, 1669
PspN4I	GGNNCC	5 cut(s)	143, 1668, 1839, 1902, 2086
PspPI	GGNCC	2 cut(s)	360, 2085
PsrI	GAACNNNNNNTAC	4 cut(s)	1841, 1873, 1959, 1991
PstI	CTGCAG	2 cut(s)	640, 1315
PstNI	CAGNNNCTG	2 cut(s)	58, 671
PsyI	GACNNNGTC	1 cut(s)	272
RsaI	GTAC	5 cut(s)	1262, 1499, 1743, 1850, 1977
RsaNI	GTAC	5 cut(s)	1261, 1498, 1742, 1849, 1976
RseI	CAYNNNNRTG	3 cut(s)	406, 963, 1472
SacI	GAGCTC	1 cut(s)	1605
SaqAI	TTAA	7 cut(s)	44, 431, 500, 651, 1013, 1221, 2061
SatI	GCNGC	9 cut(s)	94, 714, 790, 1038, 1134, 1137, 1314, 2106, 2238
Sau3AI	GATC	2 cut(s)	699, 1272
Sau96I	GGNCC	2 cut(s)	360, 2085
SchI	GAGTC	3 cut(s)	95, 1079, 2036
ScrFI	CCNGG	3 cut(s)	139, 1059, 1671
SduI	GDGCHC	6 cut(s)	251, 330, 511, 1074, 1581, 1605
SfaNI	GCATC	2 cut(s)	658, 1005
SfcI	CTRYAG	2 cut(s)	636, 1311
SinI	GGWCC	1 cut(s)	2085
SmiMI	CAYNNNNRTG	3 cut(s)	406, 963, 1472
SmlI	CTYRAG	2 cut(s)	335, 2293
SmoI	CTYRAG	2 cut(s)	335, 2293
Sse9I	AATT	8 cut(s)	432, 1353, 1502, 1637, 1707, 1943, 2133, 2169
SsiI	CCGC	9 cut(s)	94, 645, 789, 1488, 1515, 1861, 1951, 2066, 2238
SspMI	CTAG	2 cut(s)	287, 2343
SstI	GAGCTC	1 cut(s)	1605
StyD4I	CCNGG	3 cut(s)	137, 1057, 1669
StyI	CCWWGG	4 cut(s)	145, 588, 901, 2336
TaaI	ACNGT	2 cut(s)	396, 1833
TaiI	ACGT	7 cut(s)	176, 227, 276, 389, 558, 825, 2369
TaqI	TCGA	5 cut(s)	245, 276, 1470, 1828, 1914
TasI	AATT	8 cut(s)	432, 1353, 1502, 1637, 1707, 1943, 2133, 2169
TatI	WGTACW	3 cut(s)	1260, 1497, 1848
TauI	GCSGC	3 cut(s)	96, 792, 2240
TfiI	GAWTC	1 cut(s)	2045
Tru1I	TTAA	7 cut(s)	44, 431, 500, 651, 1013, 1221, 2061
Tru9I	TTAA	7 cut(s)	44, 431, 500, 651, 1013, 1221, 2061
TscAI	CASTG	3 cut(s)	399, 645, 1315
TseFI	GTSAC	4 cut(s)	568, 956, 1306, 1990
TseI	GCWGC	6 cut(s)	713, 1037, 1133, 1136, 1313, 2105
Tsp45I	GTSAC	4 cut(s)	568, 956, 1306, 1990
TspDTI	ATGAA	8 cut(s)	337, 390, 1220, 1450, 1473, 1646, 1936, 2207
TspRI	CASTG	3 cut(s)	399, 645, 1315
Tth111I	GACNNNGTC	1 cut(s)	272
Van91I	CCANNNNNTGG	1 cut(s)	1676
VneI	GTGCAC	1 cut(s)	1577
VpaK11BI	GGWCC	1 cut(s)	2085
VspI	ATTAAT	1 cut(s)	1013
XapI	RAATTY	4 cut(s)	1502, 1707, 1943, 2169
XceI	RCATGY	2 cut(s)	1389, 1597
XcmI	CCANNNNNNNNNTGG	1 cut(s)	475
XmnI	GAANNNNTTC	3 cut(s)	127, 1943, 2303
XspI	CTAG	2 cut(s)	287, 2343
ZraI	GACGTC	1 cut(s)	225
Zsp2I	ATGCAT	1 cut(s)	623

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.