Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0004734

Physical Location & Seq

Genomic Coordinates Reverse (-)

56488550 .. 56493149

Gene Structure 4600 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG304400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

ATGGCGGAGAAAGTGGAGAGGATGAGGAAATCAGTAGAGAAAGAAGGAGAAGAGTTGGAAAAAAAGAACGACCAGATGAATGAGAGAAAGGTATCGTGGGCAAAGCTCCGGCGTGTAGACTCCCTCAATTTGGAGGCCGGAAGAGTTTCCATGACTCACAGCCACGGCTCACAGGTGAGCTGGAGGAGGACGTTGAGTTTGGCATTTCAAAGCATTGGGGTTATATATGGAGACATAGGGACGTCTCCTCTCTATGTGTATGCTAGCACATTCACTGATGGCATTGACAACAGTGAAGACATTATAGGGGTATTGTCACTCATCATCTACACCATTGCACTCGTACCCATGCTCAAGTATGTGTTCATCGTCTTGTGGGCCAACGACAACGGCGATGGGGGAACATTTGCCCTGTATTCCTTGATATGCCGATATGCGAAGGTGAGTTTAATTCCGAATAACCAGCCAGAAGACACGCAGCTATCCAACTACAAGCTCGACTTGCCATCAAACGAATTGAAACGAGCCCAGAAGATTAAGAAGAAGCTGGAAAATAGTAAAATGGCTCAATACATACTCTTCACTGTCACCATTATGGGGACTTCCATGGTAATTGGAGATGGGGTTCTTACTCCATCCATTTCAGTTCTTTCTGCAGTGAGTGGAATCGACTCGTTAGGAAAAAATGCTGTCGTGGGGATTTCGGTAGCGATCTTGGTCATTCTCTTCTCTGTTCAGCGATTCGGTACCGATAAAGTGGGGTTTGCCTTTGCTCCTGTAATCTTGGTGTGGTTCCTCTTCATCAGTGGCATTGGTCTTTACAACTTGTTCGTACATGACATCGGTGTTCTTCGTGCTTTCAATCCAATGTACATGGTTCAGTACTTCCAAAGAAACGCAAAAAAAGGATGGGTTTCCCTTGGGGGAATATTTCTCTGCATTACTGGCACCGAAGCCATGTTTGCTGATCTGGGTCACTTCAATGTCAAAGCAGTCCAAATCAGTTTCTCTTGCATTACATTTCCCGCGTTGATCACTGCATATAGTGGCCAAGCAGCATACCTCCGTAAGTTCCCTCTCGAGGTGGAGAAGACGTTCTACAAATCGATCCCAGATCCTTTGTACTGGCCAACCTTTGTTGTGGCCGTAGCTGCTGCCATTATTGCCAGCCAAGCTATGATTTCCGGGGCATTCGCAATAATCTCTCAGTCCCTTAGTCTCGGTTGTTTCCCACGAGTTAAGGTCGTTCACACCTCCGCTAAGTACGAAGGTCAAGTATACATACCTGAGGTTAACTATATGCTCATGATCGCTTGCGTGGTGGTCACCGCAGCCTTCAAGACTACAGAAAAGATTGGAAACGCTTATGGAATCGCCGTGGTCAGTGTGATGGTCATTACAACTGGTTTACTTACTCTAATTATGCTGGTAATATGGAAGACCAGCATATGGTTGATTGCTCTCTTCCTTGTGGGCTTTCTTTCAATCGAGGTCATCTATTTATCTTCAGTTATGTACAAATTCGTTCAAGGCGGGTTCCTTCCTCTGGTGTTTGCTTCATTCCTTATGGCAGTCATGGCGATTTGGCATTATGTACACAAGAAAAGATACATGTTTGAGATCAACAACAAGGTTTCAAGCGAATACATGAGACAATTGGCCTCAAATCCCAACATTAACCGCGTGCCTGGAATTGGACTTCTCTATTCTGAGCTTGTCCAAGGAATTCCTCCTATATTTTCTCATTTTGTTTCCAATATACCCTCCATTCATTCAATTGTGGTAATTGTGTCTATCAAGTCCATTCCCCTCAGCAAAGTTGCAGTGGAGGAGAGGTTTCTGTTCCGACAGTTGGAGCCAAGAGAGTATCGAATGTTCCGTTGCGTAGCAAGATACGGCTACAATGACAGAATGGAGGGGCCAAAAGAGTTTGAGCAACAATTAATCGAGAATTTGAAGGAGTTTATTCGCCATGAACACTTTGTACTTGAAGGAGAAGCACCCGGGAATGGAGGAAAAACAGAGGAGCAAGTGGAAGCAGAGCAACAGCCTAACCCTTCGTCTGCTTCCTCACCGTCGATTCAGTCATTCAATGCTGGTAGGTCAACAAATTCGTCTAACCGGATTGTGTCTAGCCGGATTGTCCCTGTTCCAATCCGAGGGGCCGAAGAGGAAATGCAGTTTGTGCAAGCAGAAATGGAAAAAGGGATGGTATATCTGCTGGGAGAGACAGAAGTGGTTGCAGCAGAAAACGCATCTTTCTTCAAGAAGCTCATTGTCAACTATGTCTATGATTTCTTGAGGAAAAACTTTAGGCAAGGGCAGAATATAATGGCAATTCCAAGGTCTAGGCTTCTCAGAGTTGGAATGACCTATGAGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0008150 GO:0008324 GO:0009674 GO:0009987 GO:0010107 GO:0015075 GO:0015077 GO:0015079 GO:0015081 GO:0015291 GO:0015293 GO:0015294 GO:0015318 GO:0015370 GO:0015672 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0035725 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

794

Amino Acids

88.84

Weight (kDa)

9.01

Isoelectric Point (pI)

33.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	67 - 548	4.2e-164	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	563 - 794	8.9e-25	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004734)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13420
fragaria_vesca	FvH4_4g22240 FvH4_4g22240 FvH4_4g22260
malus_domestica	MD13G1133100.v1.1 MD13G1133200.v1.1 MD16G1143900.v1.1
prunus_persica	Prupe.1G212100_v2.0.a1 Prupe.1G212200_v2.0.a1
pyrus_communis	pycom13g11630
rosa_chinensis	RchiOBHm_Chr4g0428481 RchiOBHm_Chr4g0428501
rosa_laevigata	RLG00000007145 RLG00000007146
rosa_multiflora	Rmu_sc0002072.1_g000037 Rmu_sc0004623.1_g000012 Rmu_sc0006844.1_g000008
rosa_roxburghii	Rroxscaffold_5G00370180 Rroxscaffold_5G00370210
rosa_rugosa	Rorug04G0225500 Rorug04G0225600
rosa_samantha	Rh4AG283100 Rh4AG283200 Rh4BG288800 Rh4BG288900 Rh4CG304400 Rh4CG304900 Rh4DG285900 Rh4DG286000
rosa_wichuraiana	Rw4G024580 Rw4G024600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	245
Acc65I	GGTACC	1 cut(s)	746
AccB1I	GGYRCC	2 cut(s)	746, 947
AccB7I	CCANNNNNTGG	1 cut(s)	1449
AccI	GTMKAC	2 cut(s)	117, 1278
AccII	CGCG	2 cut(s)	1028, 1683
AciI	CCGC	6 cut(s)	5, 1026, 1257, 1329, 1533, 1681
AclWI	GGATC	2 cut(s)	1102, 1109
AcoI	YGGCCR	3 cut(s)	1048, 1127, 1143
AcsI	RAATTY	4 cut(s)	1520, 1725, 1951, 2110
AcuI	CTGAAG	1 cut(s)	1491
AcyI	GRCGYC	1 cut(s)	242
AfiI	CCNNNNNNNGG	9 cut(s)	130, 597, 1081, 1449, 1546, 1694, 1852, 2009, 2159
AflIII	ACRYGT	1 cut(s)	1611
AjnI	CCWGG	1 cut(s)	1687
AloI	GAACNNNNNNTCC	4 cut(s)	609, 641, 1079, 1111
AluBI	AGCT	9 cut(s)	106, 180, 481, 496, 547, 1151, 1175, 1714, 2272
AluI	AGCT	9 cut(s)	106, 180, 481, 496, 547, 1151, 1175, 1714, 2272
Alw26I	GTCTC	5 cut(s)	225, 249, 1223, 1645, 2222
AlwI	GGATC	2 cut(s)	1102, 1109
Ama87I	CYCGRG	2 cut(s)	1079, 2003
AoxI	GGCC	8 cut(s)	135, 378, 1048, 1127, 1143, 1659, 1919, 2163
ApeKI	GCWGC	6 cut(s)	478, 1055, 1151, 1154, 1331, 2243
ApoI	RAATTY	4 cut(s)	1520, 1725, 1951, 2110
ArsI	GACNNNNNNTTYG	2 cut(s)	181, 213
AseI	ATTAAT	1 cut(s)	1943
Asp700I	GAANNNNTTC	2 cut(s)	145, 1094
Asp718I	GGTACC	1 cut(s)	746
AspS9I	GGNCC	3 cut(s)	378, 1919, 2163
AsuC2I	CCSGG	3 cut(s)	1186, 2004, 2005
AsuHPI	GGTGA	5 cut(s)	187, 454, 580, 1318, 2064
AsuNHI	GCTAGC	1 cut(s)	263
AvaI	CYCGRG	2 cut(s)	1079, 2003
AxyI	CCTNAGG	1 cut(s)	1287
BalI	TGGCCA	2 cut(s)	1050, 1129
BanI	GGYRCC	2 cut(s)	746, 947
BanII	GRGCYC	1 cut(s)	529
BarI	GAAGNNNNNNTAC	2 cut(s)	1082, 1114
BauI	CACGAG	1 cut(s)	1233
BbsI	GAAGAC	4 cut(s)	303, 477, 1097, 1445
BbvCI	CCTCAGC	1 cut(s)	1811
BbvI	GCAGC	6 cut(s)	490, 1067, 1138, 1141, 1343, 2255
BccI	CCATC	8 cut(s)	272, 389, 514, 614, 643, 903, 1384, 2203
BceAI	ACGGC	5 cut(s)	181, 406, 1130, 1361, 1912
BciT130I	CCWGG	1 cut(s)	1689
BclI	TGATCA	1 cut(s)	1032
BcnI	CCSGG	3 cut(s)	1186, 2004, 2005
BcoDI	GTCTC	5 cut(s)	225, 249, 1223, 1645, 2222
BfaI	CTAG	3 cut(s)	264, 2133, 2349
BfmI	CTRYAG	2 cut(s)	654, 1344
BisI	GCNGC	6 cut(s)	479, 1056, 1152, 1155, 1332, 2244
BlsI	GCNGC	6 cut(s)	480, 1057, 1153, 1156, 1333, 2245
BmcAI	AGTACT	1 cut(s)	884
Bme1390I	CCNGG	4 cut(s)	1186, 1689, 2004, 2005
BmeT110I	CYCGRG	2 cut(s)	1079, 2003
BmgT120I	GGNCC	3 cut(s)	378, 1919, 2163
BmiI	GGNNCC	7 cut(s)	748, 794, 949, 1538, 1857, 1920, 2164
BmrFI	CCNGG	4 cut(s)	1186, 1689, 2004, 2005
BmsI	GCATC	1 cut(s)	2264
BmtI	GCTAGC	1 cut(s)	267
BpiI	GAAGAC	4 cut(s)	303, 477, 1097, 1445
BpmI	CTGGAG	1 cut(s)	202
Bpu10I	CCTNAGC	1 cut(s)	1811
BpuEI	CTTGAG	2 cut(s)	338, 2320
BpuMI	CCSGG	3 cut(s)	1186, 2004, 2005
Bsa29I	ATCGAT	1 cut(s)	1106
BsaHI	GRCGYC	1 cut(s)	242
BsaJI	CCNNGG	9 cut(s)	163, 606, 919, 1185, 1377, 1720, 2003, 2158, 2342
BsaWI	WCCGGW	1 cut(s)	2121
BsaXI	ACNNNNNCTCC	6 cut(s)	609, 639, 1079, 1109, 1820, 1850
Bsc4I	CCNNNNNNNGG	9 cut(s)	130, 597, 1081, 1449, 1546, 1694, 1852, 2009, 2159
Bse1I	ACTGG	3 cut(s)	949, 1130, 1408
Bse21I	CCTNAGG	1 cut(s)	1287
Bse3DI	GCAATG	1 cut(s)	333
BseBI	CCWGG	1 cut(s)	1689
BseCI	ATCGAT	1 cut(s)	1106
BseDI	CCNNGG	9 cut(s)	163, 606, 919, 1185, 1377, 1720, 2003, 2158, 2342
BseGI	GGATG	4 cut(s)	27, 635, 914, 2214
BseLI	CCNNNNNNNGG	9 cut(s)	130, 597, 1081, 1449, 1546, 1694, 1852, 2009, 2159
BseMI	GCAATG	1 cut(s)	333
BseMII	CTCAG	5 cut(s)	1220, 1278, 1701, 1825, 2371
BseNI	ACTGG	3 cut(s)	949, 1130, 1408
BseRI	GAGGAG	4 cut(s)	199, 237, 1844, 2039
BseXI	GCAGC	6 cut(s)	490, 1067, 1138, 1141, 1343, 2255
BseYI	CCCAGC	1 cut(s)	2221
Bsh1236I	CGCG	2 cut(s)	1028, 1683
BshFI	GGCC	8 cut(s)	137, 380, 1050, 1129, 1145, 1661, 1921, 2165
BshNI	GGYRCC	2 cut(s)	746, 947
BshVI	ATCGAT	1 cut(s)	1106
BsiHKCI	CYCGRG	2 cut(s)	1079, 2003
BsiSI	CCGG	6 cut(s)	109, 138, 1185, 2004, 2122, 2137
BslFI	GGGAC	4 cut(s)	253, 613, 1195, 2129
BslI	CCNNNNNNNGG	9 cut(s)	130, 597, 1081, 1449, 1546, 1694, 1852, 2009, 2159
BsmAI	GTCTC	5 cut(s)	225, 249, 1223, 1645, 2222
BsmBI	CGTCTC	1 cut(s)	249
BsmFI	GGGAC	4 cut(s)	253, 613, 1195, 2129
BsmI	GAATGC	1 cut(s)	1190
BsnI	GGCC	8 cut(s)	137, 380, 1050, 1129, 1145, 1661, 1921, 2165
BsoBI	CYCGRG	2 cut(s)	1079, 2003
Bsp1286I	GDGCHC	1 cut(s)	529
Bsp1407I	TGTACA	3 cut(s)	870, 1515, 1594
Bsp143I	GATC	7 cut(s)	711, 967, 1032, 1107, 1114, 1308, 1620
Bsp19I	CCATGG	1 cut(s)	606
BspACI	CCGC	6 cut(s)	5, 1026, 1257, 1329, 1533, 1681
BspANI	GGCC	8 cut(s)	137, 380, 1050, 1129, 1145, 1661, 1921, 2165
BspCNI	CTCAG	5 cut(s)	1219, 1279, 1702, 1824, 2370
BspDI	ATCGAT	1 cut(s)	1106
BspFNI	CGCG	2 cut(s)	1028, 1683
BspHI	TCATGA	1 cut(s)	1305
BspLI	GGNNCC	7 cut(s)	748, 794, 949, 1538, 1857, 1920, 2164
BspMAI	CTGCAG	1 cut(s)	658
BspOI	GCTAGC	1 cut(s)	267
BspPI	GGATC	2 cut(s)	1102, 1109
BspT107I	GGYRCC	2 cut(s)	746, 947
BsrDI	GCAATG	1 cut(s)	333
BsrGI	TGTACA	3 cut(s)	870, 1515, 1594
BsrI	ACTGG	3 cut(s)	949, 1130, 1408
BssECI	CCNNGG	9 cut(s)	163, 606, 919, 1185, 1377, 1720, 2003, 2158, 2342
BssMI	GATC	7 cut(s)	711, 967, 1032, 1107, 1114, 1308, 1620
BssNAI	GTATAC	1 cut(s)	1279
BssNI	GRCGYC	1 cut(s)	242
BssSI	CACGAG	1 cut(s)	1233
BssT1I	CCWWGG	4 cut(s)	606, 919, 1720, 2342
Bst1107I	GTATAC	1 cut(s)	1279
Bst2BI	CACGAG	1 cut(s)	1233
Bst2UI	CCWGG	1 cut(s)	1689
Bst4CI	ACNGT	4 cut(s)	293, 586, 1851, 2076
Bst6I	CTCTTC	7 cut(s)	45, 136, 584, 731, 803, 1469, 2163
BstACI	GRCGYC	1 cut(s)	242
BstAPI	GCANNNNNTGC	1 cut(s)	2185
BstAUI	TGTACA	3 cut(s)	870, 1515, 1594
BstC8I	GCNNGC	5 cut(s)	265, 1168, 1315, 1685, 2190
BstDEI	CTNAG	7 cut(s)	1206, 1214, 1260, 1287, 1710, 1811, 2357
BstDSI	CCRYGG	3 cut(s)	163, 606, 1377
BstEII	GGTNACC	1 cut(s)	1324
BstF5I	GGATG	4 cut(s)	27, 635, 914, 2214
BstFNI	CGCG	2 cut(s)	1028, 1683
BstKTI	GATC	7 cut(s)	714, 970, 1035, 1110, 1117, 1311, 1623
BstMAI	GTCTC	5 cut(s)	225, 249, 1223, 1645, 2222
BstMBI	GATC	7 cut(s)	711, 967, 1032, 1107, 1114, 1308, 1620
BstMWI	GCNNNNNNNGC	9 cut(s)	502, 945, 962, 1151, 1163, 1172, 1577, 2185, 2252
BstNI	CCWGG	1 cut(s)	1689
BstNSI	RCATGY	1 cut(s)	1615
BstPI	GGTNACC	1 cut(s)	1324
BstSCI	CCNGG	4 cut(s)	1184, 1687, 2002, 2003
BstSFI	CTRYAG	2 cut(s)	654, 1344
BstUI	CGCG	2 cut(s)	1028, 1683
BstV1I	GCAGC	6 cut(s)	490, 1067, 1138, 1141, 1343, 2255
BstV2I	GAAGAC	4 cut(s)	303, 477, 1097, 1445
BstX2I	RGATCY	1 cut(s)	1114
BstYI	RGATCY	1 cut(s)	1114
BstZ17I	GTATAC	1 cut(s)	1279
Bsu15I	ATCGAT	1 cut(s)	1106
Bsu36I	CCTNAGG	1 cut(s)	1287
BsuRI	GGCC	8 cut(s)	137, 380, 1050, 1129, 1145, 1661, 1921, 2165
BsuTUI	ATCGAT	1 cut(s)	1106
BtgI	CCRYGG	3 cut(s)	163, 606, 1377
BtgZI	GCGATG	1 cut(s)	408
BtsCI	GGATG	4 cut(s)	27, 635, 914, 2214
BtsI	GCAGTG	3 cut(s)	663, 1035, 1830
BtsIMutI	CAGTG	8 cut(s)	273, 298, 582, 663, 811, 1035, 1390, 1830
Cac8I	GCNNGC	5 cut(s)	265, 1168, 1315, 1685, 2190
CciI	TCATGA	1 cut(s)	1305
Cfr13I	GGNCC	3 cut(s)	378, 1919, 2163
Cfr9I	CCCGGG	1 cut(s)	2003
ClaI	ATCGAT	1 cut(s)	1106
DdeI	CTNAG	7 cut(s)	1206, 1214, 1260, 1287, 1710, 1811, 2357
DpnI	GATC	7 cut(s)	713, 969, 1034, 1109, 1116, 1310, 1622
DpnII	GATC	7 cut(s)	711, 967, 1032, 1107, 1114, 1308, 1620
EaeI	YGGCCR	3 cut(s)	1048, 1127, 1143
Eam1104I	CTCTTC	7 cut(s)	45, 136, 584, 731, 803, 1469, 2163
EarI	CTCTTC	7 cut(s)	45, 136, 584, 731, 803, 1469, 2163
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	4 cut(s)	606, 919, 1720, 2342
Eco24I	GRGCYC	1 cut(s)	529
Eco57I	CTGAAG	1 cut(s)	1491
Eco81I	CCTNAGG	1 cut(s)	1287
Eco88I	CYCGRG	2 cut(s)	1079, 2003
Eco91I	GGTNACC	1 cut(s)	1324
EcoO65I	GGTNACC	1 cut(s)	1324
EcoRI	GAATTC	1 cut(s)	1725
EcoRII	CCWGG	1 cut(s)	1687
EcoT14I	CCWWGG	4 cut(s)	606, 919, 1720, 2342
EcoT38I	GRGCYC	1 cut(s)	529
ErhI	CCWWGG	4 cut(s)	606, 919, 1720, 2342
Esp3I	CGTCTC	1 cut(s)	249
FalI	AAGNNNNNCTT	2 cut(s)	485, 517
FaqI	GGGAC	4 cut(s)	253, 613, 1195, 2129
FauI	CCCGC	2 cut(s)	1033, 1526
FauNDI	CATATG	1 cut(s)	1448
FbaI	TGATCA	1 cut(s)	1032
FblI	GTMKAC	2 cut(s)	117, 1278
Fnu4HI	GCNGC	6 cut(s)	479, 1056, 1152, 1155, 1332, 2244
FokI	GGATG	4 cut(s)	34, 622, 921, 2221
FriOI	GRGCYC	1 cut(s)	529
Fsp4HI	GCNGC	6 cut(s)	479, 1056, 1152, 1155, 1332, 2244
FspBI	CTAG	3 cut(s)	264, 2133, 2349
GluI	GCNGC	6 cut(s)	479, 1056, 1152, 1155, 1332, 2244
GsaI	CCCAGC	1 cut(s)	2225
GsuI	CTGGAG	1 cut(s)	202
HaeIII	GGCC	8 cut(s)	137, 380, 1050, 1129, 1145, 1661, 1921, 2165
HapII	CCGG	6 cut(s)	109, 138, 1185, 2004, 2122, 2137
Hin1I	GRCGYC	1 cut(s)	242
HincII	GTYRAC	3 cut(s)	1294, 2106, 2281
HindII	GTYRAC	3 cut(s)	1294, 2106, 2281
HinfI	GANTC	7 cut(s)	119, 154, 666, 671, 741, 1371, 2080
HpaI	GTTAAC	1 cut(s)	1294
HpaII	CCGG	6 cut(s)	109, 138, 1185, 2004, 2122, 2137
HphI	GGTGA	5 cut(s)	187, 454, 580, 1318, 2064
Hpy166II	GTNNAC	8 cut(s)	118, 1249, 1279, 1294, 1409, 1597, 2106, 2281
Hpy188I	TCNGA	5 cut(s)	456, 1711, 1847, 2159, 2360
Hpy188III	TCNNGA	6 cut(s)	1079, 1306, 1339, 1948, 2266, 2299
Hpy8I	GTNNAC	8 cut(s)	118, 1249, 1279, 1294, 1409, 1597, 2106, 2281
Hpy99I	CGWCG	1 cut(s)	2080
HpyAV	CCTTC	8 cut(s)	38, 433, 1262, 1345, 1550, 1951, 1985, 2067
HpyCH4III	ACNGT	4 cut(s)	293, 586, 1851, 2076
HpyCH4IV	ACGT	3 cut(s)	191, 242, 1094
HpyCH4V	TGCA	9 cut(s)	338, 656, 939, 1014, 1040, 1823, 2179, 2188, 2243
HpyF10VI	GCNNNNNNNGC	9 cut(s)	502, 945, 962, 1151, 1163, 1172, 1577, 2185, 2252
HpyF3I	CTNAG	7 cut(s)	1206, 1214, 1260, 1287, 1710, 1811, 2357
HpySE526I	ACGT	3 cut(s)	191, 242, 1094
Hsp92I	GRCGYC	1 cut(s)	242
KpnI	GGTACC	1 cut(s)	750
Ksp22I	TGATCA	1 cut(s)	1032
KspAI	GTTAAC	1 cut(s)	1294
Kzo9I	GATC	7 cut(s)	711, 967, 1032, 1107, 1114, 1308, 1620
LmnI	GCTCC	4 cut(s)	111, 778, 1855, 2026
Lsp1109I	GCAGC	6 cut(s)	490, 1067, 1138, 1141, 1343, 2255
LweI	GCATC	1 cut(s)	2264
MaeI	CTAG	3 cut(s)	264, 2133, 2349
MaeII	ACGT	3 cut(s)	191, 242, 1094
MaeIII	GTNAC	4 cut(s)	315, 586, 974, 1324
MalI	GATC	7 cut(s)	713, 969, 1034, 1109, 1116, 1310, 1622
MboI	GATC	7 cut(s)	711, 967, 1032, 1107, 1114, 1308, 1620
MfeI	CAATTG	2 cut(s)	1655, 1776
MflI	RGATCY	1 cut(s)	1114
MhlI	GDGCHC	1 cut(s)	529
MlsI	TGGCCA	2 cut(s)	1050, 1129
MluNI	TGGCCA	2 cut(s)	1050, 1129
MlyI	GAGTC	3 cut(s)	113, 148, 665
MmeI	TCCRAC	5 cut(s)	36, 510, 1833, 1870, 2344
Mox20I	TGGCCA	2 cut(s)	1050, 1129
MroXI	GAANNNNTTC	2 cut(s)	145, 1094
MscI	TGGCCA	2 cut(s)	1050, 1129
MseI	TTAA	6 cut(s)	449, 537, 1239, 1293, 1677, 1943
MslI	CAYNNNNRTG	2 cut(s)	593, 981
Msp20I	TGGCCA	2 cut(s)	1050, 1129
MspI	CCGG	6 cut(s)	109, 138, 1185, 2004, 2122, 2137
MspR9I	CCNGG	4 cut(s)	1186, 1689, 2004, 2005
MunI	CAATTG	2 cut(s)	1655, 1776
Mva1269I	GAATGC	1 cut(s)	1190
MvaI	CCWGG	1 cut(s)	1689
MvnI	CGCG	2 cut(s)	1028, 1683
MwoI	GCNNNNNNNGC	9 cut(s)	502, 945, 962, 1151, 1163, 1172, 1577, 2185, 2252
NciI	CCSGG	3 cut(s)	1186, 2004, 2005
NcoI	CCATGG	1 cut(s)	606
NdeI	CATATG	1 cut(s)	1448
NdeII	GATC	7 cut(s)	711, 967, 1032, 1107, 1114, 1308, 1620
NheI	GCTAGC	1 cut(s)	263
NlaIV	GGNNCC	7 cut(s)	748, 794, 949, 1538, 1857, 1920, 2164
NmuCI	GTSAC	4 cut(s)	315, 586, 974, 1324
NspI	RCATGY	1 cut(s)	1615
PaeR7I	CTCGAG	1 cut(s)	1079
PagI	TCATGA	1 cut(s)	1305
PciI	ACATGT	1 cut(s)	1611
PcsI	WCGNNNNNNNCGW	2 cut(s)	390, 1876
PctI	GAATGC	1 cut(s)	1190
PdmI	GAANNNNTTC	2 cut(s)	145, 1094
PfeI	GAWTC	4 cut(s)	666, 741, 1371, 2080
PflMI	CCANNNNNTGG	1 cut(s)	1449
PkrI	GCNGC	6 cut(s)	480, 1057, 1153, 1156, 1333, 2245
PleI	GAGTC	3 cut(s)	113, 148, 665
PpsI	GAGTC	3 cut(s)	113, 148, 665
PscI	ACATGT	1 cut(s)	1611
PshBI	ATTAAT	1 cut(s)	1943
Psp6I	CCWGG	1 cut(s)	1687
PspEI	GGTNACC	1 cut(s)	1324
PspFI	CCCAGC	1 cut(s)	2221
PspGI	CCWGG	1 cut(s)	1687
PspN4I	GGNNCC	7 cut(s)	748, 794, 949, 1538, 1857, 1920, 2164
PspPI	GGNCC	3 cut(s)	378, 1919, 2163
PsrI	GAACNNNNNNTAC	4 cut(s)	1859, 1891, 1968, 2000
PstI	CTGCAG	1 cut(s)	658
PsuI	RGATCY	1 cut(s)	1114
RseI	CAYNNNNRTG	2 cut(s)	593, 981
SaqAI	TTAA	6 cut(s)	449, 537, 1239, 1293, 1677, 1943
SatI	GCNGC	6 cut(s)	479, 1056, 1152, 1155, 1332, 2244
Sau3AI	GATC	7 cut(s)	711, 967, 1032, 1107, 1114, 1308, 1620
Sau96I	GGNCC	3 cut(s)	378, 1919, 2163
ScaI	AGTACT	1 cut(s)	884
SchI	GAGTC	3 cut(s)	113, 148, 665
ScrFI	CCNGG	4 cut(s)	1186, 1689, 2004, 2005
SduI	GDGCHC	1 cut(s)	529
SfaNI	GCATC	1 cut(s)	2264
SfcI	CTRYAG	2 cut(s)	654, 1344
Sfr274I	CTCGAG	1 cut(s)	1079
SlaI	CTCGAG	1 cut(s)	1079
SmaI	CCCGGG	1 cut(s)	2005
SmiMI	CAYNNNNRTG	2 cut(s)	593, 981
SmlI	CTYRAG	3 cut(s)	353, 1079, 2299
SmoI	CTYRAG	3 cut(s)	353, 1079, 2299
SsiI	CCGC	6 cut(s)	5, 1026, 1257, 1329, 1533, 1681
SspI	AATATT	1 cut(s)	930
SspMI	CTAG	3 cut(s)	264, 2133, 2349
StyD4I	CCNGG	4 cut(s)	1184, 1687, 2002, 2003
StyI	CCWWGG	4 cut(s)	606, 919, 1720, 2342
TaaI	ACNGT	4 cut(s)	293, 586, 1851, 2076
TaiI	ACGT	3 cut(s)	194, 245, 1097
TaqI	TCGA	8 cut(s)	498, 669, 1080, 1106, 1488, 1870, 1947, 2078
TatI	WGTACW	6 cut(s)	870, 882, 1122, 1515, 1594, 1984
TfiI	GAWTC	4 cut(s)	666, 741, 1371, 2080
Tru1I	TTAA	6 cut(s)	449, 537, 1239, 1293, 1677, 1943
Tru9I	TTAA	6 cut(s)	449, 537, 1239, 1293, 1677, 1943
TscAI	CASTG	8 cut(s)	280, 298, 589, 663, 811, 1042, 1390, 1830
TseFI	GTSAC	4 cut(s)	315, 586, 974, 1324
TseI	GCWGC	6 cut(s)	478, 1055, 1151, 1154, 1331, 2243
Tsp45I	GTSAC	4 cut(s)	315, 586, 974, 1324
TspDTI	ATGAA	6 cut(s)	92, 355, 790, 1548, 1760, 1989
TspGWI	ACGGA	2 cut(s)	1055, 1868
TspMI	CCCGGG	1 cut(s)	2003
TspRI	CASTG	8 cut(s)	280, 298, 589, 663, 811, 1042, 1390, 1830
Van91I	CCANNNNNTGG	1 cut(s)	1449
VspI	ATTAAT	1 cut(s)	1943
XapI	RAATTY	4 cut(s)	1520, 1725, 1951, 2110
XceI	RCATGY	1 cut(s)	1615
XhoI	CTCGAG	1 cut(s)	1079
XmaI	CCCGGG	1 cut(s)	2003
XmiI	GTMKAC	2 cut(s)	117, 1278
XmnI	GAANNNNTTC	2 cut(s)	145, 1094
XspI	CTAG	3 cut(s)	264, 2133, 2349
ZraI	GACGTC	1 cut(s)	243
ZrmI	AGTACT	1 cut(s)	884

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.