Prupe.1G396700_v2.0.a1
ERF Family

DnaJ Hsp40 cysteine-rich domain superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0015264
Physical Location & Seq
Forward (+)
35165604 .. 35167370
1767 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G396700.1

Sequence Viewer

Length: 459 bp
ATGACGAGCTGTTTGTGCTGCAGACCAGCGATTGTGGCCAAATCAATTCACAACGAGGGCTTTGCGTCGCCGTCTAGAGCTCTAAATCGTGTTGCTGGGGTTGTACCTTCCGGTACAAACGGGAGGTCCTTCAGTTCAAGGTTTCGTGGCGTGCGCGCTTCAGCTGTGGACTCGTATGAGAGCTCTTCTGATTTCGTCAATCGCATGGAAAAAGCCTGGTTAATATCCAAGCAACCAAGGCCTGTTGCTTGTTCTTCTTGCGACTCAAACGGTCATATTGAATGCAAATGGTGTGGGGGCACAGGCTTCTTTATGCTCGGCGATAACATGCTTTGCCAAGTCCCTTCGAGAGGTACTAGTTGTGTTATTTGTACTGGAAAGGGATCAATGTGTTGCTCTGATTGCAAAGGAACAGGCTTTCGTGCCAAGTGGTTAGGACAGCCCCCTATTTCCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

153

Amino Acids

16.22

Weight (kDa)

9.18

Isoelectric Point (pI)

58.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015264)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24860
fragaria_vesca FvH4_2g41340 FvH4_2g41340
malus_domestica MD08G1052200.v1.1 MD15G1043300.v1.1
prunus_persica Prupe.1G396700_v2.0.a1
pyrus_communis pycom15g04020
rosa_chinensis RchiOBHm_Chr6g0299201
rosa_laevigata RLG00000011454
rosa_roxburghii Rroxscaffold_7G00168920
rosa_rugosa Rorug06G0286200
rosa_samantha Rh6AG397100 Rh6BG405800 Rh6CG411900 Rh6DG398600
rosa_wichuraiana Rw6G034780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 156
AclWI GGATC 1 cut(s) 391
AcoI YGGCCR 1 cut(s) 36
AcuI CTGAAG 2 cut(s) 115, 144
AfaI GTAC 4 cut(s) 105, 115, 355, 373
AfiI CCNNNNNNNGG 1 cut(s) 350
AgsI TTSAA 2 cut(s) 138, 281
AhlI ACTAGT 1 cut(s) 356
AjnI CCWGG 1 cut(s) 215
AluBI AGCT 4 cut(s) 9, 80, 164, 183
AluI AGCT 4 cut(s) 9, 80, 164, 183
Alw21I GWGCWC 2 cut(s) 82, 185
AlwI GGATC 1 cut(s) 391
AoxI GGCC 2 cut(s) 36, 239
ApeKI GCWGC 1 cut(s) 18
ArsI GACNNNNNNTTYG 3 cut(s) 27, 110, 142
AspLEI GCGC 2 cut(s) 156, 158
AspS9I GGNCC 1 cut(s) 126
AvaII GGWCC 1 cut(s) 126
BaeGI GKGCMC 1 cut(s) 302
BalI TGGCCA 1 cut(s) 38
BanII GRGCYC 2 cut(s) 82, 185
Bbv12I GWGCWC 2 cut(s) 82, 185
BbvI GCAGC 1 cut(s) 5
BceAI ACGGC 1 cut(s) 55
BcgI CGANNNNNNTGC 2 cut(s) 44, 78
BciT130I CCWGG 1 cut(s) 217
BcuI ACTAGT 1 cut(s) 356
BfaI CTAG 2 cut(s) 75, 357
BfmI CTRYAG 1 cut(s) 19
BisI GCNGC 1 cut(s) 19
BlsI GCNGC 1 cut(s) 20
Bme1390I CCNGG 1 cut(s) 217
Bme18I GGWCC 1 cut(s) 126
BmgT120I GGNCC 1 cut(s) 126
BmrFI CCNGG 1 cut(s) 217
BsaJI CCNNGG 1 cut(s) 236
BsaWI WCCGGW 1 cut(s) 110
Bsc4I CCNNNNNNNGG 1 cut(s) 350
Bse1I ACTGG 1 cut(s) 379
BseBI CCWGG 1 cut(s) 217
BseDI CCNNGG 1 cut(s) 236
BseLI CCNNNNNNNGG 1 cut(s) 350
BseNI ACTGG 1 cut(s) 379
BsePI GCGCGC 1 cut(s) 154
BseSI GKGCMC 1 cut(s) 302
BseXI GCAGC 1 cut(s) 5
BseYI CCCAGC 1 cut(s) 95
Bsh1236I CGCG 1 cut(s) 156
BshFI GGCC 2 cut(s) 38, 241
BsiHKAI GWGCWC 2 cut(s) 82, 185
BsiSI CCGG 1 cut(s) 111
BslFI GGGAC 1 cut(s) 326
BslI CCNNNNNNNGG 1 cut(s) 350
BsmFI GGGAC 1 cut(s) 326
BsmI GAATGC 1 cut(s) 287
BsnI GGCC 2 cut(s) 38, 241
Bsp1286I GDGCHC 3 cut(s) 82, 185, 302
Bsp143I GATC 1 cut(s) 383
BspANI GGCC 2 cut(s) 38, 241
BspFNI CGCG 1 cut(s) 156
BspMAI CTGCAG 1 cut(s) 23
BspPI GGATC 1 cut(s) 391
BspQI GCTCTTC 1 cut(s) 190
BsrI ACTGG 1 cut(s) 379
BssECI CCNNGG 1 cut(s) 236
BssHII GCGCGC 1 cut(s) 154
BssMI GATC 1 cut(s) 383
BssT1I CCWWGG 1 cut(s) 236
Bst2UI CCWGG 1 cut(s) 217
Bst4CI ACNGT 1 cut(s) 272
Bst6I CTCTTC 1 cut(s) 190
BstC8I GCNNGC 2 cut(s) 152, 156
BstENI CCTNNNNNAGG 1 cut(s) 348
BstFNI CGCG 1 cut(s) 156
BstHHI GCGC 2 cut(s) 156, 158
BstKTI GATC 1 cut(s) 386
BstMBI GATC 1 cut(s) 383
BstMWI GCNNNNNNNGC 4 cut(s) 15, 35, 238, 402
BstNI CCWGG 1 cut(s) 217
BstNSI RCATGY 1 cut(s) 331
BstSCI CCNGG 1 cut(s) 215
BstSFI CTRYAG 1 cut(s) 19
BstSLI GKGCMC 1 cut(s) 302
BstUI CGCG 1 cut(s) 156
BstV1I GCAGC 1 cut(s) 5
BsuRI GGCC 2 cut(s) 38, 241
Cac8I GCNNGC 2 cut(s) 152, 156
CfoI GCGC 2 cut(s) 156, 158
Cfr13I GGNCC 1 cut(s) 126
CseI GACGC 1 cut(s) 54
Csp6I GTAC 4 cut(s) 104, 114, 354, 372
CspCI CAANNNNNGTGG 2 cut(s) 274, 309
CviAII CATG 2 cut(s) 205, 328
CviQI GTAC 4 cut(s) 104, 114, 354, 372
DpnI GATC 1 cut(s) 385
DpnII GATC 1 cut(s) 383
EaeI YGGCCR 1 cut(s) 36
Eam1104I CTCTTC 1 cut(s) 190
EarI CTCTTC 1 cut(s) 190
Ecl136II GAGCTC 2 cut(s) 80, 183
Eco130I CCWWGG 1 cut(s) 236
Eco147I AGGCCT 1 cut(s) 241
Eco24I GRGCYC 2 cut(s) 82, 185
Eco47I GGWCC 1 cut(s) 126
Eco53kI GAGCTC 2 cut(s) 80, 183
Eco57I CTGAAG 2 cut(s) 115, 144
EcoICRI GAGCTC 2 cut(s) 80, 183
EcoNI CCTNNNNNAGG 1 cut(s) 348
EcoO109I RGGNCCY 1 cut(s) 126
EcoRII CCWGG 1 cut(s) 215
EcoT14I CCWWGG 1 cut(s) 236
EcoT38I GRGCYC 2 cut(s) 82, 185
ErhI CCWWGG 1 cut(s) 236
FaeI CATG 2 cut(s) 208, 331
FaiI YATR 5 cut(s) 177, 206, 276, 314, 329
FaqI GGGAC 1 cut(s) 326
FatI CATG 2 cut(s) 204, 327
Fnu4HI GCNGC 1 cut(s) 19
FriOI GRGCYC 2 cut(s) 82, 185
Fsp4HI GCNGC 1 cut(s) 19
FspBI CTAG 2 cut(s) 75, 357
GlaI GCGC 2 cut(s) 155, 157
GluI GCNGC 1 cut(s) 19
GsaI CCCAGC 1 cut(s) 99
HaeIII GGCC 2 cut(s) 38, 241
HapII CCGG 1 cut(s) 111
HgaI GACGC 1 cut(s) 54
HhaI GCGC 2 cut(s) 156, 158
Hin1II CATG 2 cut(s) 208, 331
Hin6I GCGC 2 cut(s) 154, 156
HinP1I GCGC 2 cut(s) 154, 156
HinfI GANTC 2 cut(s) 170, 263
HpaII CCGG 1 cut(s) 111
Hpy166II GTNNAC 1 cut(s) 169
Hpy188I TCNGA 2 cut(s) 190, 400
Hpy188III TCNNGA 2 cut(s) 75, 348
Hpy8I GTNNAC 1 cut(s) 169
Hpy99I CGWCG 1 cut(s) 70
HpyAV CCTTC 3 cut(s) 117, 139, 354
HpyCH4III ACNGT 1 cut(s) 272
HpyCH4V TGCA 3 cut(s) 21, 285, 405
HpyF10VI GCNNNNNNNGC 4 cut(s) 15, 35, 238, 402
Hsp92II CATG 2 cut(s) 208, 331
HspAI GCGC 2 cut(s) 154, 156
Kzo9I GATC 1 cut(s) 383
LguI GCTCTTC 1 cut(s) 190
LpnPI CCDG 9 cut(s) 39, 81, 124, 202, 229, 255, 288, 360, 399
Lsp1109I GCAGC 1 cut(s) 5
MaeI CTAG 2 cut(s) 75, 357
MalI GATC 1 cut(s) 385
MboI GATC 1 cut(s) 383
MboII GAAGA 2 cut(s) 177, 246
MhlI GDGCHC 3 cut(s) 82, 185, 302
MlsI TGGCCA 1 cut(s) 38
MluCI AATT 1 cut(s) 45
MluNI TGGCCA 1 cut(s) 38
MlyI GAGTC 2 cut(s) 164, 257
MnlI CCTC 3 cut(s) 49, 117, 344
Mox20I TGGCCA 1 cut(s) 38
MscI TGGCCA 1 cut(s) 38
MseI TTAA 1 cut(s) 221
Msp20I TGGCCA 1 cut(s) 38
MspA1I CMGCKG 1 cut(s) 164
MspI CCGG 1 cut(s) 111
MspR9I CCNGG 1 cut(s) 217
Mva1269I GAATGC 1 cut(s) 287
MvaI CCWGG 1 cut(s) 217
MvnI CGCG 1 cut(s) 156
MwoI GCNNNNNNNGC 4 cut(s) 15, 35, 238, 402
NdeII GATC 1 cut(s) 383
NlaIII CATG 2 cut(s) 208, 331
NmeAIII GCCGAG 1 cut(s) 297
NspI RCATGY 1 cut(s) 331
PauI GCGCGC 1 cut(s) 154
PceI AGGCCT 1 cut(s) 241
PciSI GCTCTTC 1 cut(s) 190
PctI GAATGC 1 cut(s) 287
PkrI GCNGC 1 cut(s) 20
PleI GAGTC 2 cut(s) 164, 257
PpsI GAGTC 2 cut(s) 164, 257
PpuMI RGGWCCY 1 cut(s) 126
Psp124BI GAGCTC 2 cut(s) 82, 185
Psp5II RGGWCCY 1 cut(s) 126
Psp6I CCWGG 1 cut(s) 215
PspFI CCCAGC 1 cut(s) 95
PspGI CCWGG 1 cut(s) 215
PspPI GGNCC 1 cut(s) 126
PspPPI RGGWCCY 1 cut(s) 126
PstI CTGCAG 1 cut(s) 23
PteI GCGCGC 1 cut(s) 154
PvuII CAGCTG 1 cut(s) 164
RsaI GTAC 4 cut(s) 105, 115, 355, 373
RsaNI GTAC 4 cut(s) 104, 114, 354, 372
SacI GAGCTC 2 cut(s) 82, 185
SapI GCTCTTC 1 cut(s) 190
SaqAI TTAA 1 cut(s) 221
SatI GCNGC 1 cut(s) 19
Sau3AI GATC 1 cut(s) 383
Sau96I GGNCC 1 cut(s) 126
SchI GAGTC 2 cut(s) 164, 257
ScrFI CCNGG 1 cut(s) 217
SduI GDGCHC 3 cut(s) 82, 185, 302
SetI ASST 8 cut(s) 11, 82, 109, 128, 143, 166, 185, 355
SfcI CTRYAG 1 cut(s) 19
SinI GGWCC 1 cut(s) 126
SpeI ACTAGT 1 cut(s) 356
Sse9I AATT 1 cut(s) 45
SseBI AGGCCT 1 cut(s) 241
SspMI CTAG 2 cut(s) 75, 357
SstI GAGCTC 2 cut(s) 82, 185
StuI AGGCCT 1 cut(s) 241
StyD4I CCNGG 1 cut(s) 215
StyI CCWWGG 1 cut(s) 236
TaaI ACNGT 1 cut(s) 272
TaqI TCGA 1 cut(s) 347
TasI AATT 1 cut(s) 45
TatI WGTACW 1 cut(s) 371
Tru1I TTAA 1 cut(s) 221
Tru9I TTAA 1 cut(s) 221
TseI GCWGC 1 cut(s) 18
VpaK11BI GGWCC 1 cut(s) 126
XagI CCTNNNNNAGG 1 cut(s) 348
XbaI TCTAGA 1 cut(s) 74
XceI RCATGY 1 cut(s) 331
XspI CTAG 2 cut(s) 75, 357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.