Prupe.1G409300_v2.0.a1

Acts as a Mg(2 ) transporter. Can also transport other divalent cations such as Fe(2 ), Sr(2 ), Ba(2 ), Mn(2 ) and Co(2 ) but to a much less extent than Mg(2 )

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
35813857 .. 35819545
5689 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G409300.1

Sequence Viewer

Length: 1035 bp
ATGTGGGAGTCGATCTTTCTAACGCTGGCGGCGACGGCCGGAAACAATATCGGAAAAATTCTTCAGAAGAAGGGCACCGTCATTCTTCCTCCTCTCTCTTTCAAGCTCAAGGTGATCAGGGCGTATGCTTTGAACAGAGCTTGGTTGATAGGTTTTCTGATGGATATATTTGGAGCCTTGCTCATGTTGAGAGCATTATCTCTTGCTCCTGTATCTGTCATACAACCCGTTTCTGGGTGTGGACTTGCCATTCTTTCAATCTTTTCCCATTTTTATCTGAAGGAAATTATGAATGCTGTTGACTGGATGGGGATTACCTTAGCAGGCATTGGCACTATAGGAGTTGGTGCCGGAGGTGAGGAGCAAAAGGCTTCTGCTATATCTATTTTCCATCTACCATGGTTGGCAATTGTAGTCGCCATCTTGTTTGTACTACTGAATGGATGGCTACGCATCTACAGACGTCAACGCAAAGAACAGGAGTTGATGGAATATGACGTTGTTGAAGAAATTATATACGGCTTGGAATCTGGCATTTTGTTTGGGATGGCATCTGTAATATCAAAGATGGGATTCGTATTCTTGGAGCAGGGTTTCCCCAGCATGCTGGTTCCTATATGCCTGATATTCAGCATATGTTGTAGTGGTACAGGGTTTTTTTACCAGACTTGGGGGTTAAAGCATGGGAGGGCAATTGTGGTGTCTACATGTGCTGCTGTGGCATCAATTGTGACTGGTGTGCTTGCTGGAATGCTTGCTTTGGGTGAAAGATTGCCTTCAGCGCCAACCGCTCGTCTTTCACTTGTGCTTGGATGGCTATTTATAATTATTGGCGTGATTTTACTTGTGAGTTCGACACGGCTGGTGCGAAACCTTCCTCGGCCTTTACGGCATTTTATCCAGAGTGGTGTTGATAAGAACTTCAGCCAGAGAAAATCCGGGTCTATCCGCACTAGGGATTCGAGCCCTAGCACTGTTATTCAGGCAGCAACTCTGCATCATTTGATACCAACTTCGTCTAAAGAAAAGGCTTGA

Protein Analysis

345

Amino Acids

37.46

Weight (kDa)

9.79

Isoelectric Point (pI)

37.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G11960
fragaria_vesca FvH4_2g31600
malus_domestica MD08G1064900.v1.1 MD15G1056700.v1.1
prunus_persica Prupe.1G409300_v2.0.a1
pyrus_communis pycom08g05320 pycom15g05310
rosa_chinensis RchiOBHm_Chr6g0311221
rosa_laevigata RLG00000010426
rosa_roxburghii Rroxscaffold_7G00157890
rosa_rugosa Rorug06G0386600.1
rosa_samantha Rh6AG500700 Rh6BG511300 Rh6DG503600
rosa_wichuraiana Rw6G043600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 824
AatII GACGTC 1 cut(s) 466
AccB1I GGYRCC 2 cut(s) 74, 347
AccBSI CCGCTC 1 cut(s) 791
AccI GTMKAC 1 cut(s) 704
AciI CCGC 3 cut(s) 29, 789, 949
AcoI YGGCCR 1 cut(s) 36
AcsI RAATTY 1 cut(s) 57
AcuI CTGAAG 4 cut(s) 47, 299, 762, 907
AcyI GRCGYC 1 cut(s) 463
AfaI GTAC 2 cut(s) 432, 649
AfiI CCNNNNNNNGG 4 cut(s) 233, 234, 670, 955
AflIII ACRYGT 1 cut(s) 707
AgsI TTSAA 4 cut(s) 103, 133, 258, 506
AluBI AGCT 2 cut(s) 106, 140
AluI AGCT 2 cut(s) 106, 140
AoxI GGCC 2 cut(s) 36, 881
ApeKI GCWGC 2 cut(s) 713, 986
ApoI RAATTY 1 cut(s) 57
AspLEI GCGC 1 cut(s) 784
AsuC2I CCSGG 1 cut(s) 940
AsuHPI GGTGA 3 cut(s) 124, 368, 776
BaeGI GKGCMC 1 cut(s) 77
BanI GGYRCC 2 cut(s) 74, 347
BanII GRGCYC 1 cut(s) 968
BbvI GCAGC 2 cut(s) 700, 998
BccI CCATC 9 cut(s) 154, 301, 399, 428, 438, 481, 541, 562, 807
BceAI ACGGC 4 cut(s) 51, 535, 875, 905
BclI TGATCA 1 cut(s) 114
BcnI CCSGG 1 cut(s) 940
BfaI CTAG 2 cut(s) 954, 969
BfmI CTRYAG 2 cut(s) 336, 457
BfoI RGCGCY 1 cut(s) 785
BglI GCCNNNNNGGC 1 cut(s) 889
BisI GCNGC 3 cut(s) 30, 714, 987
BlsI GCNGC 3 cut(s) 31, 715, 988
Bme1390I CCNGG 1 cut(s) 940
BmiI GGNNCC 4 cut(s) 76, 175, 349, 612
BmrFI CCNGG 1 cut(s) 940
BmsI GCATC 4 cut(s) 462, 560, 731, 1006
BplI GAGNNNNNCTC 2 cut(s) 165, 197
Bpu10I CCTNAGC 1 cut(s) 319
BpuEI CTTGAG 1 cut(s) 92
BpuMI CCSGG 1 cut(s) 940
BsaHI GRCGYC 1 cut(s) 463
BsaJI CCNNGG 2 cut(s) 398, 878
Bsc4I CCNNNNNNNGG 4 cut(s) 233, 234, 670, 955
Bse1I ACTGG 2 cut(s) 308, 739
BseDI CCNNGG 2 cut(s) 398, 878
BseGI GGATG 4 cut(s) 312, 449, 552, 818
BseLI CCNNNNNNNGG 4 cut(s) 233, 234, 670, 955
BseNI ACTGG 2 cut(s) 308, 739
BseRI GAGGAG 2 cut(s) 81, 374
BseSI GKGCMC 1 cut(s) 77
BseX3I CGGCCG 1 cut(s) 36
BseXI GCAGC 2 cut(s) 700, 998
BseYI CCCAGC 1 cut(s) 599
Bsh1285I CGRYCG 1 cut(s) 39
BshFI GGCC 2 cut(s) 38, 883
BshNI GGYRCC 2 cut(s) 74, 347
BsiEI CGRYCG 1 cut(s) 39
BsiSI CCGG 3 cut(s) 39, 351, 939
BslI CCNNNNNNNGG 4 cut(s) 233, 234, 670, 955
BsmI GAATGC 2 cut(s) 298, 756
BsnI GGCC 2 cut(s) 38, 883
Bsp1286I GDGCHC 2 cut(s) 77, 968
Bsp143I GATC 2 cut(s) 12, 114
Bsp19I CCATGG 1 cut(s) 398
BspACI CCGC 3 cut(s) 29, 789, 949
BspANI GGCC 2 cut(s) 38, 883
BspLI GGNNCC 4 cut(s) 76, 175, 349, 612
BspT107I GGYRCC 2 cut(s) 74, 347
BsrBI CCGCTC 1 cut(s) 791
BsrI ACTGG 2 cut(s) 308, 739
BssECI CCNNGG 2 cut(s) 398, 878
BssMI GATC 2 cut(s) 12, 114
BssNI GRCGYC 1 cut(s) 463
BssT1I CCWWGG 1 cut(s) 398
Bst4CI ACNGT 2 cut(s) 79, 976
BstACI GRCGYC 1 cut(s) 463
BstC8I GCNNGC 5 cut(s) 27, 325, 605, 744, 756
BstDEI CTNAG 1 cut(s) 319
BstDSI CCRYGG 1 cut(s) 398
BstF5I GGATG 4 cut(s) 312, 449, 552, 818
BstH2I RGCGCY 1 cut(s) 785
BstHHI GCGC 1 cut(s) 784
BstKTI GATC 2 cut(s) 15, 117
BstMBI GATC 2 cut(s) 12, 114
BstMCI CGRYCG 1 cut(s) 39
BstMWI GCNNNNNNNGC 6 cut(s) 35, 719, 781, 788, 814, 889
BstNSI RCATGY 2 cut(s) 607, 711
BstSCI CCNGG 1 cut(s) 938
BstSFI CTRYAG 2 cut(s) 336, 457
BstSLI GKGCMC 1 cut(s) 77
BstV1I GCAGC 2 cut(s) 700, 998
BstXI CCANNNNNNTGG 1 cut(s) 607
BstZI CGGCCG 1 cut(s) 36
BsuRI GGCC 2 cut(s) 38, 883
BtgI CCRYGG 1 cut(s) 398
BtsCI GGATG 4 cut(s) 312, 449, 552, 818
BtsIMutI CAGTG 1 cut(s) 972
Cac8I GCNNGC 5 cut(s) 27, 325, 605, 744, 756
CfoI GCGC 1 cut(s) 784
Csp6I GTAC 2 cut(s) 431, 648
CviAII CATG 5 cut(s) 184, 399, 604, 683, 708
CviQI GTAC 2 cut(s) 431, 648
DdeI CTNAG 1 cut(s) 319
DpnI GATC 2 cut(s) 14, 116
DpnII GATC 2 cut(s) 12, 114
EaeI YGGCCR 1 cut(s) 36
EagI CGGCCG 1 cut(s) 36
EclXI CGGCCG 1 cut(s) 36
Eco130I CCWWGG 1 cut(s) 398
Eco24I GRGCYC 1 cut(s) 968
Eco52I CGGCCG 1 cut(s) 36
Eco57I CTGAAG 4 cut(s) 47, 299, 762, 907
EcoT14I CCWWGG 1 cut(s) 398
EcoT38I GRGCYC 1 cut(s) 968
ErhI CCWWGG 1 cut(s) 398
FaeI CATG 5 cut(s) 187, 402, 607, 686, 711
FalI AAGNNNNNCTT 2 cut(s) 760, 792
FatI CATG 5 cut(s) 183, 398, 603, 682, 707
FauNDI CATATG 1 cut(s) 635
FbaI TGATCA 1 cut(s) 114
FblI GTMKAC 1 cut(s) 704
Fnu4HI GCNGC 3 cut(s) 30, 714, 987
FokI GGATG 4 cut(s) 319, 456, 559, 825
FriOI GRGCYC 1 cut(s) 968
Fsp4HI GCNGC 3 cut(s) 30, 714, 987
FspBI CTAG 2 cut(s) 954, 969
GlaI GCGC 1 cut(s) 783
GluI GCNGC 3 cut(s) 30, 714, 987
GsaI CCCAGC 1 cut(s) 603
HaeII RGCGCY 1 cut(s) 785
HaeIII GGCC 2 cut(s) 38, 883
HapII CCGG 3 cut(s) 39, 351, 939
HhaI GCGC 1 cut(s) 784
Hin1I GRCGYC 1 cut(s) 463
Hin1II CATG 5 cut(s) 187, 402, 607, 686, 711
Hin6I GCGC 1 cut(s) 782
HinP1I GCGC 1 cut(s) 782
HincII GTYRAC 2 cut(s) 301, 467
HindII GTYRAC 2 cut(s) 301, 467
HinfI GANTC 4 cut(s) 8, 527, 573, 959
HpaII CCGG 3 cut(s) 39, 351, 939
HphI GGTGA 3 cut(s) 124, 368, 776
Hpy166II GTNNAC 4 cut(s) 242, 301, 467, 705
Hpy188I TCNGA 4 cut(s) 53, 66, 159, 279
Hpy188III TCNNGA 1 cut(s) 901
Hpy8I GTNNAC 4 cut(s) 242, 301, 467, 705
Hpy99I CGWCG 1 cut(s) 37
HpyAV CCTTC 4 cut(s) 64, 274, 786, 884
HpyCH4III ACNGT 2 cut(s) 79, 976
HpyCH4IV ACGT 2 cut(s) 463, 498
HpyCH4V TGCA 1 cut(s) 997
HpyF10VI GCNNNNNNNGC 6 cut(s) 35, 719, 781, 788, 814, 889
HpyF3I CTNAG 1 cut(s) 319
HpySE526I ACGT 2 cut(s) 463, 498
Hsp92I GRCGYC 1 cut(s) 463
Hsp92II CATG 5 cut(s) 187, 402, 607, 686, 711
HspAI GCGC 1 cut(s) 782
Ksp22I TGATCA 1 cut(s) 114
Kzo9I GATC 2 cut(s) 12, 114
LmnI GCTCC 4 cut(s) 173, 211, 361, 586
Lsp1109I GCAGC 2 cut(s) 700, 998
LweI GCATC 4 cut(s) 462, 560, 731, 1006
MaeI CTAG 2 cut(s) 954, 969
MaeII ACGT 2 cut(s) 463, 498
MaeIII GTNAC 1 cut(s) 730
MalI GATC 2 cut(s) 14, 116
MbiI CCGCTC 1 cut(s) 791
MboI GATC 2 cut(s) 12, 114
MboII GAAGA 4 cut(s) 53, 77, 79, 518
MfeI CAATTG 3 cut(s) 408, 693, 726
MhlI GDGCHC 2 cut(s) 77, 968
MluCI AATT 7 cut(s) 57, 285, 408, 510, 693, 726, 825
MlyI GAGTC 1 cut(s) 17
MnlI CCTC 6 cut(s) 99, 102, 347, 352, 681, 888
MseI TTAA 1 cut(s) 677
MspI CCGG 3 cut(s) 39, 351, 939
MspR9I CCNGG 1 cut(s) 940
MunI CAATTG 3 cut(s) 408, 693, 726
Mva1269I GAATGC 2 cut(s) 298, 756
MwoI GCNNNNNNNGC 6 cut(s) 35, 719, 781, 788, 814, 889
NciI CCSGG 1 cut(s) 940
NcoI CCATGG 1 cut(s) 398
NdeI CATATG 1 cut(s) 635
NdeII GATC 2 cut(s) 12, 114
NlaIII CATG 5 cut(s) 187, 402, 607, 686, 711
NlaIV GGNNCC 4 cut(s) 76, 175, 349, 612
NmeAIII GCCGAG 1 cut(s) 859
NmuCI GTSAC 1 cut(s) 730
NspI RCATGY 2 cut(s) 607, 711
PaeI GCATGC 1 cut(s) 607
PciI ACATGT 1 cut(s) 707
PcsI WCGNNNNNNNCGW 2 cut(s) 29, 865
PctI GAATGC 2 cut(s) 298, 756
PfeI GAWTC 3 cut(s) 527, 573, 959
PkrI GCNGC 3 cut(s) 31, 715, 988
PleI GAGTC 1 cut(s) 16
PpsI GAGTC 1 cut(s) 16
PscI ACATGT 1 cut(s) 707
PsiI TTATAA 1 cut(s) 824
PspFI CCCAGC 1 cut(s) 599
PspN4I GGNNCC 4 cut(s) 76, 175, 349, 612
RsaI GTAC 2 cut(s) 432, 649
RsaNI GTAC 2 cut(s) 431, 648
SaqAI TTAA 1 cut(s) 677
SatI GCNGC 3 cut(s) 30, 714, 987
Sau3AI GATC 2 cut(s) 12, 114
SchI GAGTC 1 cut(s) 17
ScrFI CCNGG 1 cut(s) 940
SduI GDGCHC 2 cut(s) 77, 968
SetI ASST 9 cut(s) 108, 114, 142, 154, 320, 358, 466, 501, 876
SfaNI GCATC 4 cut(s) 462, 560, 731, 1006
SfcI CTRYAG 2 cut(s) 336, 457
SmlI CTYRAG 1 cut(s) 107
SmoI CTYRAG 1 cut(s) 107
SphI GCATGC 1 cut(s) 607
Sse9I AATT 7 cut(s) 57, 285, 408, 510, 693, 726, 825
SsiI CCGC 3 cut(s) 29, 789, 949
SspMI CTAG 2 cut(s) 954, 969
StyD4I CCNGG 1 cut(s) 938
StyI CCWWGG 1 cut(s) 398
TaaI ACNGT 2 cut(s) 79, 976
TaiI ACGT 2 cut(s) 466, 501
TaqI TCGA 3 cut(s) 11, 854, 962
TasI AATT 7 cut(s) 57, 285, 408, 510, 693, 726, 825
TatI WGTACW 1 cut(s) 430
TauI GCSGC 1 cut(s) 32
TfiI GAWTC 3 cut(s) 527, 573, 959
Tru1I TTAA 1 cut(s) 677
Tru9I TTAA 1 cut(s) 677
TscAI CASTG 1 cut(s) 979
TseFI GTSAC 1 cut(s) 730
TseI GCWGC 2 cut(s) 713, 986
Tsp45I GTSAC 1 cut(s) 730
TspDTI ATGAA 1 cut(s) 305
TspRI CASTG 1 cut(s) 979
XapI RAATTY 1 cut(s) 57
XceI RCATGY 2 cut(s) 607, 711
XmiI GTMKAC 1 cut(s) 704
XspI CTAG 2 cut(s) 954, 969
ZraI GACGTC 1 cut(s) 464
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.