Prupe.1G461600_v2.0.a1

Flowering-promoting factor 1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
38606342 .. 38607041
700 bp
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UTR
Exon/CDS
Intron
Prupe.1G461600.1

Sequence Viewer

Length: 318 bp
ATGTCTGGGGTTTGGGTTTTCAAGAACGGGGTGATTCGTCTGGTGGAAAATCCACAGGCTGAGACATCTTCTAGGAAGAAGGCCTTGGTGCACTTGCCAAGTGGACAGGTGGTGTCGTCCTACTCGACGCTCGAGCAAATATTGACCGGGTTAGGGTGGGAGAGGTACTATGGAGGCGACCCCGACCTCTTCCAATTCCACAAGCGATCTTCCATTGACCTAATCTCTCTCCCCAGAGACTTCTCCAAGTTCAACTCCGTTTACATGTACGATATTGTCATTAAAAACCCCAACATCTTCCATGTCCGAGACATGTAG

Protein Analysis

106

Amino Acids

12.07

Weight (kDa)

9.0

Isoelectric Point (pI)

45.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011835)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 2 cut(s) 167, 269
AfiI CCNNNNNNNGG 1 cut(s) 153
AflIII ACRYGT 2 cut(s) 264, 312
AgsI TTSAA 2 cut(s) 22, 253
AjuI GAANNNNNNNTTGG 2 cut(s) 68, 100
Alw21I GWGCWC 1 cut(s) 93
Alw26I GTCTC 3 cut(s) 56, 231, 303
Alw44I GTGCAC 1 cut(s) 89
Ama87I CYCGRG 1 cut(s) 131
AoxI GGCC 1 cut(s) 81
ApaLI GTGCAC 1 cut(s) 89
AsuC2I CCSGG 1 cut(s) 148
AsuHPI GGTGA 1 cut(s) 43
AvaI CYCGRG 1 cut(s) 131
BaeGI GKGCMC 1 cut(s) 93
Bbv12I GWGCWC 1 cut(s) 93
BcnI CCSGG 1 cut(s) 148
BcoDI GTCTC 3 cut(s) 56, 231, 303
BfaI CTAG 1 cut(s) 72
Bme1390I CCNGG 1 cut(s) 148
BmeT110I CYCGRG 1 cut(s) 131
BmrFI CCNGG 1 cut(s) 148
BpuMI CCSGG 1 cut(s) 148
BsaJI CCNNGG 1 cut(s) 84
Bsc4I CCNNNNNNNGG 1 cut(s) 153
BseDI CCNNGG 1 cut(s) 84
BseLI CCNNNNNNNGG 1 cut(s) 153
BseMII CTCAG 1 cut(s) 51
BseSI GKGCMC 1 cut(s) 93
BshFI GGCC 1 cut(s) 83
BsiHKAI GWGCWC 1 cut(s) 93
BsiHKCI CYCGRG 1 cut(s) 131
BsiSI CCGG 1 cut(s) 147
BslI CCNNNNNNNGG 1 cut(s) 153
BsmAI GTCTC 3 cut(s) 56, 231, 303
BsnI GGCC 1 cut(s) 83
BsoBI CYCGRG 1 cut(s) 131
Bsp1286I GDGCHC 1 cut(s) 93
Bsp143I GATC 1 cut(s) 206
BspANI GGCC 1 cut(s) 83
BspCNI CTCAG 1 cut(s) 52
BssECI CCNNGG 1 cut(s) 84
BssMI GATC 1 cut(s) 206
BssT1I CCWWGG 1 cut(s) 84
Bst6I CTCTTC 1 cut(s) 194
BstDEI CTNAG 1 cut(s) 60
BstKTI GATC 1 cut(s) 209
BstMAI GTCTC 3 cut(s) 56, 231, 303
BstMBI GATC 1 cut(s) 206
BstNSI RCATGY 2 cut(s) 268, 316
BstSCI CCNGG 1 cut(s) 146
BstSLI GKGCMC 1 cut(s) 93
BsuRI GGCC 1 cut(s) 83
CseI GACGC 1 cut(s) 136
Csp6I GTAC 2 cut(s) 166, 268
CviAII CATG 3 cut(s) 265, 302, 313
CviJI RGCY 2 cut(s) 59, 83
CviKI_1 RGCY 2 cut(s) 59, 83
CviQI GTAC 2 cut(s) 166, 268
DdeI CTNAG 1 cut(s) 60
DpnI GATC 1 cut(s) 208
DpnII GATC 1 cut(s) 206
Eam1104I CTCTTC 1 cut(s) 194
EarI CTCTTC 1 cut(s) 194
Eco130I CCWWGG 1 cut(s) 84
Eco147I AGGCCT 1 cut(s) 83
Eco88I CYCGRG 1 cut(s) 131
EcoT14I CCWWGG 1 cut(s) 84
ErhI CCWWGG 1 cut(s) 84
FaeI CATG 3 cut(s) 268, 305, 316
FaiI YATR 4 cut(s) 171, 266, 303, 314
FalI AAGNNNNNCTT 2 cut(s) 68, 100
FatI CATG 3 cut(s) 264, 301, 312
FspBI CTAG 1 cut(s) 72
HaeIII GGCC 1 cut(s) 83
HapII CCGG 1 cut(s) 147
HgaI GACGC 1 cut(s) 136
Hin1II CATG 3 cut(s) 268, 305, 316
HinfI GANTC 1 cut(s) 34
HpaII CCGG 1 cut(s) 147
HphI GGTGA 1 cut(s) 43
Hpy166II GTNNAC 3 cut(s) 91, 104, 262
Hpy188I TCNGA 1 cut(s) 308
Hpy188III TCNNGA 1 cut(s) 22
Hpy8I GTNNAC 3 cut(s) 91, 104, 262
Hpy99I CGWCG 1 cut(s) 130
HpyAV CCTTC 1 cut(s) 73
HpyCH4V TGCA 1 cut(s) 91
HpyF3I CTNAG 1 cut(s) 60
Hsp92II CATG 3 cut(s) 268, 305, 316
Kzo9I GATC 1 cut(s) 206
LpnPI CCDG 5 cut(s) 26, 41, 92, 160, 247
MaeI CTAG 1 cut(s) 72
MalI GATC 1 cut(s) 208
MboI GATC 1 cut(s) 206
MboII GAAGA 5 cut(s) 60, 88, 181, 201, 289
MhlI GDGCHC 1 cut(s) 93
MluCI AATT 1 cut(s) 194
MnlI CCTC 3 cut(s) 156, 167, 197
MseI TTAA 1 cut(s) 282
MspI CCGG 1 cut(s) 147
MspR9I CCNGG 1 cut(s) 148
NciI CCSGG 1 cut(s) 148
NdeII GATC 1 cut(s) 206
NlaIII CATG 3 cut(s) 268, 305, 316
NspI RCATGY 2 cut(s) 268, 316
PaeR7I CTCGAG 1 cut(s) 131
PceI AGGCCT 1 cut(s) 83
PciI ACATGT 2 cut(s) 264, 312
PcsI WCGNNNNNNNCGW 1 cut(s) 122
PfeI GAWTC 1 cut(s) 34
PscI ACATGT 2 cut(s) 264, 312
PspXI VCTCGAGB 1 cut(s) 131
RsaI GTAC 2 cut(s) 167, 269
RsaNI GTAC 2 cut(s) 166, 268
SaqAI TTAA 1 cut(s) 282
Sau3AI GATC 1 cut(s) 206
ScrFI CCNGG 1 cut(s) 148
SduI GDGCHC 1 cut(s) 93
SetI ASST 4 cut(s) 111, 167, 189, 222
Sfr274I CTCGAG 1 cut(s) 131
SlaI CTCGAG 1 cut(s) 131
SmlI CTYRAG 1 cut(s) 131
SmoI CTYRAG 1 cut(s) 131
Sse9I AATT 1 cut(s) 194
SseBI AGGCCT 1 cut(s) 83
SspI AATATT 1 cut(s) 141
SspMI CTAG 1 cut(s) 72
StuI AGGCCT 1 cut(s) 83
StyD4I CCNGG 1 cut(s) 146
StyI CCWWGG 1 cut(s) 84
TaqI TCGA 2 cut(s) 125, 132
TasI AATT 1 cut(s) 194
TfiI GAWTC 1 cut(s) 34
Tru1I TTAA 1 cut(s) 282
Tru9I TTAA 1 cut(s) 282
TspGWI ACGGA 1 cut(s) 247
VneI GTGCAC 1 cut(s) 89
XceI RCATGY 2 cut(s) 268, 316
XhoI CTCGAG 1 cut(s) 131
XspI CTAG 1 cut(s) 72
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.