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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G32190 |
| fragaria_vesca | FvH4_2g28941 FvH4_2g28941 FvH4_2g28941 |
| malus_domestica | MD15G1126300.v1.1 |
| prunus_persica | Prupe.1G482200_v2.0.a1 Prupe.1G482200_v2.0.a1 Prupe.1G482200_v2.0.a1 Prupe.1G482200_v2.0.a1 Prupe.1G482200_v2.0.a1 |
| pyrus_communis | pycom15g11400 |
| rosa_chinensis | RchiOBHm_Chr6g0297771 |
| rosa_laevigata | RLG00000011563 |
| rosa_multiflora | Rmu_sc0002674.1_g000011 Rmu_sc0002674.1_g000014 |
| rosa_roxburghii | Rroxscaffold_7G00170210 Rroxscaffold_7G00179060 |
| rosa_rugosa | Rorug06G0275400 Rorug06G0275400 |
| rosa_samantha | Rh6AG385900 Rh6BG394500 Rh6CG400200 Rh6DG386700 |
| rosa_wichuraiana | Rw6G033640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2315 |
| AarI | CACCTGC | 1 cut(s) | 714 |
| Acc36I | ACCTGC | 2 cut(s) | 214, 714 |
| AccBSI | CCGCTC | 1 cut(s) | 2127 |
| AccII | CGCG | 1 cut(s) | 587 |
| AccIII | TCCGGA | 1 cut(s) | 762 |
| AciI | CCGC | 6 cut(s) | 15, 421, 587, 2127, 2219, 2222 |
| AclWI | GGATC | 1 cut(s) | 2198 |
| AcsI | RAATTY | 3 cut(s) | 271, 1401, 2132 |
| AcuI | CTGAAG | 3 cut(s) | 374, 1346, 1538 |
| AfaI | GTAC | 1 cut(s) | 1152 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 427, 534, 2272 |
| AflII | CTTAAG | 5 cut(s) | 899, 1172, 1433, 1840, 1904 |
| AflIII | ACRYGT | 1 cut(s) | 1588 |
| AjnI | CCWGG | 2 cut(s) | 318, 533 |
| Alw21I | GWGCWC | 2 cut(s) | 1089, 1674 |
| Alw26I | GTCTC | 2 cut(s) | 705, 2031 |
| AlwI | GGATC | 1 cut(s) | 2198 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 250, 1643, 2327 |
| Aor13HI | TCCGGA | 1 cut(s) | 762 |
| AoxI | GGCC | 4 cut(s) | 3, 1741, 1965, 2324 |
| ApoI | RAATTY | 3 cut(s) | 271, 1401, 2132 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 130 |
| AspS9I | GGNCC | 3 cut(s) | 1543, 1741, 2324 |
| AsuC2I | CCSGG | 1 cut(s) | 2266 |
| AsuHPI | GGTGA | 1 cut(s) | 695 |
| AsuNHI | GCTAGC | 1 cut(s) | 2147 |
| AvaII | GGWCC | 1 cut(s) | 1543 |
| AxyI | CCTNAGG | 2 cut(s) | 74, 285 |
| BanII | GRGCYC | 3 cut(s) | 1089, 1674, 1882 |
| Bbv12I | GWGCWC | 2 cut(s) | 1089, 1674 |
| BccI | CCATC | 2 cut(s) | 1903, 2189 |
| BceAI | ACGGC | 1 cut(s) | 73 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1697, 1731 |
| BciT130I | CCWGG | 2 cut(s) | 320, 535 |
| BcnI | CCSGG | 1 cut(s) | 2266 |
| BcoDI | GTCTC | 2 cut(s) | 705, 2031 |
| BfaI | CTAG | 7 cut(s) | 299, 908, 924, 1035, 1319, 1865, 2148 |
| BfmI | CTRYAG | 4 cut(s) | 462, 773, 1754, 2328 |
| BfrI | CTTAAG | 5 cut(s) | 899, 1172, 1433, 1840, 1904 |
| BfuAI | ACCTGC | 2 cut(s) | 214, 714 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2332 |
| BlpI | GCTNAGC | 2 cut(s) | 520, 1392 |
| Bme1390I | CCNGG | 3 cut(s) | 320, 535, 2266 |
| Bme18I | GGWCC | 1 cut(s) | 1543 |
| BmgT120I | GGNCC | 3 cut(s) | 1543, 1741, 2324 |
| BmiI | GGNNCC | 1 cut(s) | 204 |
| BmrFI | CCNGG | 3 cut(s) | 320, 535, 2266 |
| BmtI | GCTAGC | 1 cut(s) | 2151 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1256, 1288, 1258, 1290, 2332, 2364 |
| BpmI | CTGGAG | 3 cut(s) | 341, 458, 2334 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 520, 1392 |
| BpuEI | CTTGAG | 5 cut(s) | 160, 242, 1508, 1556, 2173 |
| BpuMI | CCSGG | 1 cut(s) | 2266 |
| BsaJI | CCNNGG | 1 cut(s) | 1218 |
| BsaWI | WCCGGW | 1 cut(s) | 762 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 427, 534, 2272 |
| Bse1I | ACTGG | 2 cut(s) | 255, 2082 |
| Bse21I | CCTNAGG | 2 cut(s) | 74, 285 |
| Bse3DI | GCAATG | 1 cut(s) | 196 |
| BseAI | TCCGGA | 1 cut(s) | 762 |
| BseBI | CCWGG | 2 cut(s) | 320, 535 |
| BseDI | CCNNGG | 1 cut(s) | 1218 |
| BseGI | GGATG | 3 cut(s) | 280, 385, 1708 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 427, 534, 2272 |
| BseMI | GCAATG | 1 cut(s) | 196 |
| BseNI | ACTGG | 2 cut(s) | 255, 2082 |
| BseRI | GAGGAG | 2 cut(s) | 446, 635 |
| BseYI | CCCAGC | 1 cut(s) | 2207 |
| BsgI | GTGCAG | 1 cut(s) | 576 |
| Bsh1236I | CGCG | 1 cut(s) | 587 |
| BshFI | GGCC | 4 cut(s) | 5, 1743, 1967, 2326 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1089, 1674 |
| BsiSI | CCGG | 2 cut(s) | 763, 2266 |
| BslFI | GGGAC | 1 cut(s) | 1847 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 427, 534, 2272 |
| BsmAI | GTCTC | 2 cut(s) | 705, 2031 |
| BsmFI | GGGAC | 1 cut(s) | 1847 |
| BsnI | GGCC | 4 cut(s) | 5, 1743, 1967, 2326 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1089, 1674, 1882 |
| Bsp13I | TCCGGA | 1 cut(s) | 762 |
| Bsp143I | GATC | 8 cut(s) | 152, 328, 574, 582, 1354, 1981, 2203, 2284 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 520, 1392 |
| Bsp19I | CCATGG | 1 cut(s) | 1218 |
| BspACI | CCGC | 6 cut(s) | 15, 421, 587, 2127, 2219, 2222 |
| BspANI | GGCC | 4 cut(s) | 5, 1743, 1967, 2326 |
| BspEI | TCCGGA | 1 cut(s) | 762 |
| BspFNI | CGCG | 1 cut(s) | 587 |
| BspLI | GGNNCC | 1 cut(s) | 204 |
| BspMAI | CTGCAG | 3 cut(s) | 466, 1758, 2332 |
| BspMI | ACCTGC | 2 cut(s) | 214, 714 |
| BspOI | GCTAGC | 1 cut(s) | 2151 |
| BspPI | GGATC | 1 cut(s) | 2198 |
| BspQI | GCTCTTC | 1 cut(s) | 1077 |
| BspTI | CTTAAG | 5 cut(s) | 899, 1172, 1433, 1840, 1904 |
| BsrBI | CCGCTC | 1 cut(s) | 2127 |
| BsrDI | GCAATG | 1 cut(s) | 196 |
| BsrI | ACTGG | 2 cut(s) | 255, 2082 |
| BssECI | CCNNGG | 1 cut(s) | 1218 |
| BssMI | GATC | 8 cut(s) | 152, 328, 574, 582, 1354, 1981, 2203, 2284 |
| BssT1I | CCWWGG | 1 cut(s) | 1218 |
| Bst2UI | CCWGG | 2 cut(s) | 320, 535 |
| Bst4CI | ACNGT | 4 cut(s) | 394, 597, 1535, 1651 |
| Bst6I | CTCTTC | 7 cut(s) | 46, 612, 961, 1077, 1233, 1956, 2021 |
| BstAFI | CTTAAG | 5 cut(s) | 899, 1172, 1433, 1840, 1904 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 66, 2099, 2327 |
| BstC8I | GCNNGC | 4 cut(s) | 507, 2149, 2328, 2356 |
| BstDSI | CCRYGG | 1 cut(s) | 1218 |
| BstF5I | GGATG | 3 cut(s) | 280, 385, 1708 |
| BstFNI | CGCG | 1 cut(s) | 587 |
| BstKTI | GATC | 8 cut(s) | 155, 331, 577, 585, 1357, 1984, 2206, 2287 |
| BstMAI | GTCTC | 2 cut(s) | 705, 2031 |
| BstMBI | GATC | 8 cut(s) | 152, 328, 574, 582, 1354, 1981, 2203, 2284 |
| BstNI | CCWGG | 2 cut(s) | 320, 535 |
| BstNSI | RCATGY | 2 cut(s) | 932, 1592 |
| BstSCI | CCNGG | 3 cut(s) | 318, 533, 2264 |
| BstSFI | CTRYAG | 4 cut(s) | 462, 773, 1754, 2328 |
| BstUI | CGCG | 1 cut(s) | 587 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 727 |
| Bsu36I | CCTNAGG | 2 cut(s) | 74, 285 |
| BsuRI | GGCC | 4 cut(s) | 5, 1743, 1967, 2326 |
| BtgI | CCRYGG | 1 cut(s) | 1218 |
| BtsCI | GGATG | 3 cut(s) | 280, 385, 1708 |
| BtsIMutI | CAGTG | 1 cut(s) | 350 |
| BveI | ACCTGC | 2 cut(s) | 214, 714 |
| Cac8I | GCNNGC | 4 cut(s) | 507, 2149, 2328, 2356 |
| CaiI | CAGNNNCTG | 3 cut(s) | 250, 1643, 2327 |
| Cfr13I | GGNCC | 3 cut(s) | 1543, 1741, 2324 |
| Csp6I | GTAC | 1 cut(s) | 1151 |
| CviAII | CATG | 5 cut(s) | 335, 929, 1219, 1589, 1738 |
| CviQI | GTAC | 1 cut(s) | 1151 |
| DpnI | GATC | 8 cut(s) | 154, 330, 576, 584, 1356, 1983, 2205, 2286 |
| DpnII | GATC | 8 cut(s) | 152, 328, 574, 582, 1354, 1981, 2203, 2284 |
| DraI | TTTAAA | 1 cut(s) | 1470 |
| Eam1104I | CTCTTC | 7 cut(s) | 46, 612, 961, 1077, 1233, 1956, 2021 |
| EarI | CTCTTC | 7 cut(s) | 46, 612, 961, 1077, 1233, 1956, 2021 |
| EciI | GGCGGA | 1 cut(s) | 2237 |
| Ecl136II | GAGCTC | 2 cut(s) | 1087, 1672 |
| Eco130I | CCWWGG | 1 cut(s) | 1218 |
| Eco24I | GRGCYC | 3 cut(s) | 1089, 1674, 1882 |
| Eco32I | GATATC | 1 cut(s) | 292 |
| Eco47I | GGWCC | 1 cut(s) | 1543 |
| Eco53kI | GAGCTC | 2 cut(s) | 1087, 1672 |
| Eco57I | CTGAAG | 3 cut(s) | 374, 1346, 1538 |
| Eco81I | CCTNAGG | 2 cut(s) | 74, 285 |
| EcoICRI | GAGCTC | 2 cut(s) | 1087, 1672 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2324 |
| EcoRII | CCWGG | 2 cut(s) | 318, 533 |
| EcoRV | GATATC | 1 cut(s) | 292 |
| EcoT14I | CCWWGG | 1 cut(s) | 1218 |
| EcoT38I | GRGCYC | 3 cut(s) | 1089, 1674, 1882 |
| ErhI | CCWWGG | 1 cut(s) | 1218 |
| FaeI | CATG | 5 cut(s) | 338, 932, 1222, 1592, 1741 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1047, 1079, 2135, 2167 |
| FaqI | GGGAC | 1 cut(s) | 1847 |
| FatI | CATG | 5 cut(s) | 334, 928, 1218, 1588, 1737 |
| FauI | CCCGC | 1 cut(s) | 2120 |
| FokI | GGATG | 3 cut(s) | 267, 392, 1715 |
| FriOI | GRGCYC | 3 cut(s) | 1089, 1674, 1882 |
| FspBI | CTAG | 7 cut(s) | 299, 908, 924, 1035, 1319, 1865, 2148 |
| GsaI | CCCAGC | 1 cut(s) | 2211 |
| GsuI | CTGGAG | 3 cut(s) | 341, 458, 2334 |
| HaeIII | GGCC | 4 cut(s) | 5, 1743, 1967, 2326 |
| HapII | CCGG | 2 cut(s) | 763, 2266 |
| Hin1II | CATG | 5 cut(s) | 338, 932, 1222, 1592, 1741 |
| HincII | GTYRAC | 1 cut(s) | 733 |
| HindII | GTYRAC | 1 cut(s) | 733 |
| HindIII | AAGCTT | 7 cut(s) | 554, 977, 1061, 1169, 1436, 1484, 2054 |
| HinfI | GANTC | 9 cut(s) | 214, 241, 323, 680, 759, 1373, 1427, 1709, 1771 |
| HpaII | CCGG | 2 cut(s) | 763, 2266 |
| HphI | GGTGA | 1 cut(s) | 695 |
| Hpy166II | GTNNAC | 4 cut(s) | 600, 733, 1498, 1594 |
| Hpy188III | TCNNGA | 7 cut(s) | 221, 287, 578, 763, 924, 1035, 2050 |
| Hpy8I | GTNNAC | 4 cut(s) | 600, 733, 1498, 1594 |
| HpyAV | CCTTC | 3 cut(s) | 16, 355, 1219 |
| HpyCH4III | ACNGT | 4 cut(s) | 394, 597, 1535, 1651 |
| Hsp92II | CATG | 5 cut(s) | 338, 932, 1222, 1592, 1741 |
| Kpn2I | TCCGGA | 1 cut(s) | 762 |
| Kzo9I | GATC | 8 cut(s) | 152, 328, 574, 582, 1354, 1981, 2203, 2284 |
| LguI | GCTCTTC | 1 cut(s) | 1077 |
| LmnI | GCTCC | 8 cut(s) | 29, 74, 194, 433, 439, 1198, 1228, 1311 |
| MaeI | CTAG | 7 cut(s) | 299, 908, 924, 1035, 1319, 1865, 2148 |
| MaeIII | GTNAC | 2 cut(s) | 1242, 2248 |
| MalI | GATC | 8 cut(s) | 154, 330, 576, 584, 1356, 1983, 2205, 2286 |
| MbiI | CCGCTC | 1 cut(s) | 2127 |
| MboI | GATC | 8 cut(s) | 152, 328, 574, 582, 1354, 1981, 2203, 2284 |
| MhlI | GDGCHC | 3 cut(s) | 1089, 1674, 1882 |
| MlyI | GAGTC | 5 cut(s) | 235, 332, 689, 753, 1703 |
| MmeI | TCCRAC | 2 cut(s) | 606, 837 |
| MroI | TCCGGA | 1 cut(s) | 762 |
| MroXI | GAANNNNTTC | 1 cut(s) | 130 |
| MslI | CAYNNNNRTG | 1 cut(s) | 543 |
| MspA1I | CMGCKG | 1 cut(s) | 1778 |
| MspCI | CTTAAG | 5 cut(s) | 899, 1172, 1433, 1840, 1904 |
| MspI | CCGG | 2 cut(s) | 763, 2266 |
| MspR9I | CCNGG | 3 cut(s) | 320, 535, 2266 |
| MvaI | CCWGG | 2 cut(s) | 320, 535 |
| MvnI | CGCG | 1 cut(s) | 587 |
| NciI | CCSGG | 1 cut(s) | 2266 |
| NcoI | CCATGG | 1 cut(s) | 1218 |
| NdeII | GATC | 8 cut(s) | 152, 328, 574, 582, 1354, 1981, 2203, 2284 |
| NheI | GCTAGC | 1 cut(s) | 2147 |
| NlaIII | CATG | 5 cut(s) | 338, 932, 1222, 1592, 1741 |
| NlaIV | GGNNCC | 1 cut(s) | 204 |
| NmeAIII | GCCGAG | 1 cut(s) | 495 |
| NspI | RCATGY | 2 cut(s) | 932, 1592 |
| PaqCI | CACCTGC | 1 cut(s) | 714 |
| PciI | ACATGT | 1 cut(s) | 1588 |
| PciSI | GCTCTTC | 1 cut(s) | 1077 |
| PdmI | GAANNNNTTC | 1 cut(s) | 130 |
| PfeI | GAWTC | 4 cut(s) | 214, 1373, 1427, 1771 |
| PflFI | GACNNNGTC | 1 cut(s) | 679 |
| PfoI | TCCNGGA | 2 cut(s) | 318, 2264 |
| PleI | GAGTC | 5 cut(s) | 235, 331, 688, 753, 1703 |
| PpsI | GAGTC | 5 cut(s) | 235, 331, 688, 753, 1703 |
| PscI | ACATGT | 1 cut(s) | 1588 |
| PsiI | TTATAA | 1 cut(s) | 2315 |
| Psp124BI | GAGCTC | 2 cut(s) | 1089, 1674 |
| Psp6I | CCWGG | 2 cut(s) | 318, 533 |
| PspFI | CCCAGC | 1 cut(s) | 2207 |
| PspGI | CCWGG | 2 cut(s) | 318, 533 |
| PspN4I | GGNNCC | 1 cut(s) | 204 |
| PspPI | GGNCC | 3 cut(s) | 1543, 1741, 2324 |
| PstI | CTGCAG | 3 cut(s) | 466, 1758, 2332 |
| PstNI | CAGNNNCTG | 3 cut(s) | 250, 1643, 2327 |
| PsyI | GACNNNGTC | 1 cut(s) | 679 |
| PvuII | CAGCTG | 1 cut(s) | 1778 |
| RsaI | GTAC | 1 cut(s) | 1152 |
| RsaNI | GTAC | 1 cut(s) | 1151 |
| RseI | CAYNNNNRTG | 1 cut(s) | 543 |
| SacI | GAGCTC | 2 cut(s) | 1089, 1674 |
| SapI | GCTCTTC | 1 cut(s) | 1077 |
| Sau3AI | GATC | 8 cut(s) | 152, 328, 574, 582, 1354, 1981, 2203, 2284 |
| Sau96I | GGNCC | 3 cut(s) | 1543, 1741, 2324 |
| SbfI | CCTGCAGG | 1 cut(s) | 2332 |
| SchI | GAGTC | 5 cut(s) | 235, 332, 689, 753, 1703 |
| ScrFI | CCNGG | 3 cut(s) | 320, 535, 2266 |
| SdaI | CCTGCAGG | 1 cut(s) | 2332 |
| SduI | GDGCHC | 3 cut(s) | 1089, 1674, 1882 |
| SfcI | CTRYAG | 4 cut(s) | 462, 773, 1754, 2328 |
| SinI | GGWCC | 1 cut(s) | 1543 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 543 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 2332 |
| SsiI | CCGC | 6 cut(s) | 15, 421, 587, 2127, 2219, 2222 |
| SspI | AATATT | 1 cut(s) | 1634 |
| SspMI | CTAG | 7 cut(s) | 299, 908, 924, 1035, 1319, 1865, 2148 |
| SstI | GAGCTC | 2 cut(s) | 1089, 1674 |
| StyD4I | CCNGG | 3 cut(s) | 318, 533, 2264 |
| StyI | CCWWGG | 1 cut(s) | 1218 |
| TaaI | ACNGT | 4 cut(s) | 394, 597, 1535, 1651 |
| TaqI | TCGA | 5 cut(s) | 176, 402, 1089, 1398, 2049 |
| TaqII | GACCGA | 3 cut(s) | 145, 692, 2297 |
| TatI | WGTACW | 1 cut(s) | 1150 |
| TauI | GCSGC | 3 cut(s) | 17, 590, 2222 |
| TfiI | GAWTC | 4 cut(s) | 214, 1373, 1427, 1771 |
| TscAI | CASTG | 1 cut(s) | 357 |
| TspDTI | ATGAA | 9 cut(s) | 278, 323, 495, 657, 729, 738, 960, 1970, 2247 |
| TspGWI | ACGGA | 3 cut(s) | 1675, 1684, 2258 |
| TspRI | CASTG | 1 cut(s) | 357 |
| Tth111I | GACNNNGTC | 1 cut(s) | 679 |
| Vha464I | CTTAAG | 5 cut(s) | 899, 1172, 1433, 1840, 1904 |
| VpaK11BI | GGWCC | 1 cut(s) | 1543 |
| XapI | RAATTY | 3 cut(s) | 271, 1401, 2132 |
| XbaI | TCTAGA | 2 cut(s) | 923, 1034 |
| XceI | RCATGY | 2 cut(s) | 932, 1592 |
| XmnI | GAANNNNTTC | 1 cut(s) | 130 |
| XspI | CTAG | 7 cut(s) | 299, 908, 924, 1035, 1319, 1865, 2148 |