Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0008063

Physical Location & Seq

Genomic Coordinates Forward (+)

58562225 .. 58565544

Gene Structure 3320 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG385900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

ATGGCCTTGTCAGCCGCCACCCGCTCCAATCTCGCCGCCACCTCCTCCCAACCCTACTGCAAGTTGTGTGCTGTTAGAGTCAATGGGAAGCAGAGTAGAGTAGCGTGTACAACCAGTGCGAAACGAAGAGGCGCTTCCTTGAGGATCTGTAAATCAGTCTTAAATGACAGGAGGTCGAGTATTAGTGGCAATGGAGCGTCTGAACCTGCAAGGATTCTCCTGGAAAGATTGTTTGCCCAGACACAGAAGCTGGAAGAACAGATGAGCAGAAATTCTCGTCATCCGCAGGATGTCCAGCTCGGGTTCAATCTTGAAACCCTGGAGTGTGACCTTCACGCGGCATTGGCGGCATTGAAGAAGAAGGAAGAAGATTTGCAGGATGCTGAAAGACTGGTTTTCCTGGAGCACCTTGAATTGAACCGCACAAAGGAGGGGCTGGAGCGGCGGGAGAAAGAAACTGCTGCAGCTTGTTCTAGGTATGAGAAAATGGAGGACGAACTGAAGCGGGCTAATCTGGACTTAGCTTCTCAAGCCAGCTATATAGAAGACATAAAGCTTCAGCTTCAAGAGAGAGACCAGGAGGTTGCGGCTACGCAGTCAGCACTTTCTTTGAAAGAAGAGGAATTGGATAAAATGAGAGATGAATTGTTGAAAATGACTGAAGATGCTGCCAAGACTGACTCTGAACTTAGATCTAAGGCTCAGTTGCTGAATGAAGCCAATGAAGTTGTCAAGAGACAAGATGTGGAGATTCAAGGACTCCGGAGAGCTATACTAGAGAAAGAAAAAGAGTTGGAAGTTTCTCAGACGCAGAGGAAACTTGAAGAGGAGAAGCTAAAAGTTTCACAAGAAAACTTGGAGAAGCAGACAATGGAGTGGCTATTGGCACAGGAAGAGCTTAAGAAACTAGCGGAGGAAGTATCTAGACATGCTGGAAAAGCCAATGAAACTTTAGAGGATTTTAGGAGGGTGAAGAATCTTCTCATTGATGTGAAGTCTGAGTTGGTTTCCTCCCAGAAAGCTCTTGCTTCCTCTAGACAGAAAATGGAAGAACGAGAGGGTCTTCTGGAAAATCAATTGGAAGAACTTGAAGACCAGAAGAGAAGTGTTATGTCTTACTTAACAACTCTGAAAGATGCTCACATAGAAGTAGAAAGTGAAAGAGCAAAGCTTAGGGTTGCAGAGGCTCAAAACAAGGAGCTTGAGAGGGAATTATCCATGGAGAAGGAGCTTATGGAAGATTTAGAGGAGGTGTTGAAGAAAGAGAGATACTCTCTGCAGCAGGCCATCAATGAGATTTCTGCTCTCCAAAAGAAGCTGCACAAGAAAACTGCTGAATTTGGGGAAATGCGCGATCTTCTTCAGGTTAAAGAGTCGGAATTGGTGGAGGCTAAACTCGAAATTCAGCATTTAAAATCTGAGCTGGCTACTCATAAGCTCATTGTGGAGGAAAAGGATTTGGAACTTCTAAATGCAAGGAAGAAGCTTGAGGAAGTCAACAATGAAGTTGCAGAGCTGAAGATGCTTTTGACTAGTAAAGAGGAGCAGCTTATTCAAGCAACTGCCTTGCTCAAGGAGAAAGATGAACATGTACACACAATGCAAGATGAGTTGGATGATACAAAGCTGAAATTTTCAGAAGCCGAAACTGTGGTAGAACGGATAGCAGAGCTCACTGATAAATTGGTTAGATCTATCAAGGATGAAGACTACAATGCATCCAAATCATTTGATGACATGGGCCCTGAGTTTCTGCACCAACTACTGGAGAAACCAACTGATGAATTTAGGTTTCAGATCTTACAGCTCGAAACTGAGCTCGCATCAGCTAGGGACAGCTTAAGAAGAAAAGAAATGGAGGTCCTAGCATCTCAGGGGGCTCTCACAATGAAAGATGAGGAGCTGAAGATGGTTCTTGGAAGACTAGAAGCAAAAGAAGAAGAAGTAAAGAAGATGAAAGAAGAGTTAGAAGATGCTAATGATCTGAGAAAGCTATATGCTTTGGTTCAAGAGAGATTAGGAGAGAAAAGTATAGGAGAGTTGGCAATAGAGAAGCTTCAACTCGAGGCAGCACAATTGGAAGTTGAAGCTGCAACCAGCGCACTTCAGAAACTTGCAGAGTTGAGTGGGGAGTTTCTGAATAAAGCTAGCCTGAGCATTGAGGCTGATGGTGATACCAGTACAAGTTCCGTGGGGAATGACAAATGTTTAGTTGAGGTCACAACAGAAGTGGCTCGGATTTCAGCTTTGACTGATACGCTAGTGAAAGAGGCTGGCATTGTTGTAACTGCAGGACCGGCATCCCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

769

Amino Acids

87.39

Weight (kDa)

5.03

Isoelectric Point (pI)

53.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008063)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32190
fragaria_vesca	FvH4_2g28941 FvH4_2g28941 FvH4_2g28941
malus_domestica	MD15G1126300.v1.1
prunus_persica	Prupe.1G482200_v2.0.a1 Prupe.1G482200_v2.0.a1 Prupe.1G482200_v2.0.a1 Prupe.1G482200_v2.0.a1 Prupe.1G482200_v2.0.a1
pyrus_communis	pycom15g11400
rosa_chinensis	RchiOBHm_Chr6g0297771
rosa_laevigata	RLG00000011563
rosa_multiflora	Rmu_sc0002674.1_g000011 Rmu_sc0002674.1_g000014
rosa_roxburghii	Rroxscaffold_7G00170210 Rroxscaffold_7G00179060
rosa_rugosa	Rorug06G0275400 Rorug06G0275400
rosa_samantha	Rh6AG385900 Rh6BG394500 Rh6CG400200 Rh6DG386700
rosa_wichuraiana	Rw6G033640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	214
AccB7I	CCANNNNNTGG	1 cut(s)	1765
AccBSI	CCGCTC	2 cut(s)	24, 442
AccII	CGCG	2 cut(s)	338, 1353
AccIII	TCCGGA	1 cut(s)	762
AclWI	GGATC	1 cut(s)	152
AcsI	RAATTY	5 cut(s)	271, 1337, 1401, 1631, 1784
AcuI	CTGAAG	7 cut(s)	521, 542, 681, 1346, 1538, 1925, 2090
AfaI	GTAC	3 cut(s)	109, 1593, 2182
AfiI	CCNNNNNNNGG	3 cut(s)	337, 427, 1765
AflII	CTTAAG	2 cut(s)	899, 1840
AflIII	ACRYGT	1 cut(s)	1588
AhdI	GACNNNNNGTC	1 cut(s)	172
AhlI	ACTAGT	1 cut(s)	1532
AjnI	CCWGG	4 cut(s)	219, 318, 399, 576
AjuI	GAANNNNNNNTTGG	2 cut(s)	986, 1018
Alw21I	GWGCWC	3 cut(s)	408, 1674, 1821
Alw26I	GTCTC	2 cut(s)	567, 730
AlwI	GGATC	1 cut(s)	152
AlwNI	CAGNNNCTG	2 cut(s)	250, 709
Ama87I	CYCGRG	2 cut(s)	299, 2063
Aor13HI	TCCGGA	1 cut(s)	762
AoxI	GGCC	3 cut(s)	3, 1284, 1741
ApaI	GGGCCC	1 cut(s)	1745
ApeKI	GCWGC	8 cut(s)	461, 464, 668, 1279, 1318, 1546, 2069, 2090
ApoI	RAATTY	5 cut(s)	271, 1337, 1401, 1631, 1784
AspLEI	GCGC	3 cut(s)	134, 1353, 2102
AspS9I	GGNCC	4 cut(s)	1741, 1742, 1861, 2294
AsuHPI	GGTGA	2 cut(s)	982, 2183
AsuNHI	GCTAGC	1 cut(s)	2147
AvaI	CYCGRG	2 cut(s)	299, 2063
AvaII	GGWCC	2 cut(s)	1861, 2294
BaeGI	GKGCMC	1 cut(s)	1745
BaeI	ACNNNNGTAYC	2 cut(s)	2247, 2280
BanII	GRGCYC	4 cut(s)	1674, 1745, 1821, 1882
BbsI	GAAGAC	5 cut(s)	552, 1055, 1098, 1713, 1927
Bbv12I	GWGCWC	3 cut(s)	408, 1674, 1821
BbvI	GCAGC	8 cut(s)	448, 476, 655, 1291, 1305, 1558, 2077, 2081
BccI	CCATC	3 cut(s)	1295, 1903, 2162
BciT130I	CCWGG	4 cut(s)	221, 320, 401, 578
BcoDI	GTCTC	2 cut(s)	567, 730
BcuI	ACTAGT	1 cut(s)	1532
BfmI	CTRYAG	3 cut(s)	462, 1277, 2289
BfoI	RGCGCY	1 cut(s)	135
BfrI	CTTAAG	2 cut(s)	899, 1840
BfuAI	ACCTGC	1 cut(s)	214
BglII	AGATCT	3 cut(s)	692, 1691, 1797
Bme1390I	CCNGG	4 cut(s)	221, 320, 401, 578
Bme18I	GGWCC	2 cut(s)	1861, 2294
BmeRI	GACNNNNNGTC	1 cut(s)	172
BmeT110I	CYCGRG	2 cut(s)	299, 2063
BmgT120I	GGNCC	4 cut(s)	1741, 1742, 1861, 2294
BmiI	GGNNCC	1 cut(s)	1743
BmrFI	CCNGG	4 cut(s)	221, 320, 401, 578
BmsI	GCATC	8 cut(s)	370, 655, 1126, 1512, 1727, 1832, 1877, 1963
BmtI	GCTAGC	1 cut(s)	2151
BpiI	GAAGAC	5 cut(s)	552, 1055, 1098, 1713, 1927
BplI	GAGNNNNNCTC	4 cut(s)	1256, 1288, 1258, 1290
BpmI	CTGGAG	4 cut(s)	341, 422, 458, 1787
Bpu10I	CCTNAGC	2 cut(s)	1172, 2153
BpuEI	CTTGAG	5 cut(s)	160, 513, 1223, 1508, 1556
BsaI	GGTCTC	1 cut(s)	567
BsaJI	CCNNGG	3 cut(s)	318, 1218, 2190
BsaWI	WCCGGW	1 cut(s)	762
BsaXI	ACNNNNNCTCC	2 cut(s)	163, 193
Bsc4I	CCNNNNNNNGG	3 cut(s)	337, 427, 1765
Bse118I	RCCGGY	1 cut(s)	2296
Bse1I	ACTGG	4 cut(s)	114, 396, 1770, 2178
Bse3DI	GCAATG	1 cut(s)	196
BseAI	TCCGGA	1 cut(s)	762
BseBI	CCWGG	4 cut(s)	221, 320, 401, 578
BseDI	CCNNGG	3 cut(s)	318, 1218, 2190
BseGI	GGATG	7 cut(s)	280, 295, 385, 1621, 1708, 1718, 2300
BseLI	CCNNNNNNNGG	3 cut(s)	337, 427, 1765
BseMI	GCAATG	1 cut(s)	196
BseMII	CTCAG	9 cut(s)	716, 818, 990, 1410, 1737, 1806, 1886, 1976, 2144
BseNI	ACTGG	4 cut(s)	114, 396, 1770, 2178
BseRI	GAGGAG	5 cut(s)	34, 842, 1262, 1556, 1913
BseSI	GKGCMC	1 cut(s)	1745
BseXI	GCAGC	8 cut(s)	448, 476, 655, 1291, 1305, 1558, 2077, 2081
BsgI	GTGCAG	2 cut(s)	1304, 1739
Bsh1236I	CGCG	2 cut(s)	338, 1353
BshFI	GGCC	3 cut(s)	5, 1286, 1743
BsiHKAI	GWGCWC	3 cut(s)	408, 1674, 1821
BsiHKCI	CYCGRG	2 cut(s)	299, 2063
BsiSI	CCGG	2 cut(s)	763, 2297
BslFI	GGGAC	1 cut(s)	1847
BslI	CCNNNNNNNGG	3 cut(s)	337, 427, 1765
BsmAI	GTCTC	2 cut(s)	567, 730
BsmFI	GGGAC	1 cut(s)	1847
BsnI	GGCC	3 cut(s)	5, 1286, 1743
Bso31I	GGTCTC	1 cut(s)	567
BsoBI	CYCGRG	2 cut(s)	299, 2063
Bsp120I	GGGCCC	1 cut(s)	1741
Bsp1286I	GDGCHC	5 cut(s)	408, 1674, 1745, 1821, 1882
Bsp13I	TCCGGA	1 cut(s)	762
Bsp1407I	TGTACA	2 cut(s)	107, 1591
Bsp143I	GATC	6 cut(s)	144, 692, 1354, 1691, 1797, 1981
Bsp19I	CCATGG	1 cut(s)	1218
BspANI	GGCC	3 cut(s)	5, 1286, 1743
BspCNI	CTCAG	9 cut(s)	715, 817, 991, 1411, 1738, 1807, 1885, 1977, 2145
BspEI	TCCGGA	1 cut(s)	762
BspFNI	CGCG	2 cut(s)	338, 1353
BspLI	GGNNCC	1 cut(s)	1743
BspMAI	CTGCAG	3 cut(s)	466, 1281, 2293
BspMI	ACCTGC	1 cut(s)	214
BspOI	GCTAGC	1 cut(s)	2151
BspPI	GGATC	1 cut(s)	152
BspQI	GCTCTTC	1 cut(s)	888
BspTI	CTTAAG	2 cut(s)	899, 1840
BspTNI	GGTCTC	1 cut(s)	567
BsrBI	CCGCTC	2 cut(s)	24, 442
BsrDI	GCAATG	1 cut(s)	196
BsrFI	RCCGGY	1 cut(s)	2296
BsrGI	TGTACA	2 cut(s)	107, 1591
BsrI	ACTGG	4 cut(s)	114, 396, 1770, 2178
BssAI	RCCGGY	1 cut(s)	2296
BssECI	CCNNGG	3 cut(s)	318, 1218, 2190
BssMI	GATC	6 cut(s)	144, 692, 1354, 1691, 1797, 1981
BssT1I	CCWWGG	1 cut(s)	1218
Bst2UI	CCWGG	4 cut(s)	221, 320, 401, 578
Bst4CI	ACNGT	1 cut(s)	1651
Bst6I	CTCTTC	6 cut(s)	121, 612, 819, 888, 1094, 1956
BstAFI	CTTAAG	2 cut(s)	899, 1840
BstAUI	TGTACA	2 cut(s)	107, 1591
BstC8I	GCNNGC	7 cut(s)	507, 535, 1284, 1425, 1821, 2149, 2275
BstDSI	CCRYGG	2 cut(s)	1218, 2190
BstF5I	GGATG	7 cut(s)	280, 295, 385, 1621, 1708, 1718, 2300
BstFNI	CGCG	2 cut(s)	338, 1353
BstH2I	RGCGCY	1 cut(s)	135
BstHHI	GCGC	3 cut(s)	134, 1353, 2102
BstKTI	GATC	6 cut(s)	147, 695, 1357, 1694, 1800, 1984
BstMAI	GTCTC	2 cut(s)	567, 730
BstMBI	GATC	6 cut(s)	144, 692, 1354, 1691, 1797, 1981
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 344, 347, 442, 530, 938, 1522, 2099, 2297
BstNI	CCWGG	4 cut(s)	221, 320, 401, 578
BstNSI	RCATGY	2 cut(s)	932, 1592
BstSCI	CCNGG	4 cut(s)	219, 318, 399, 576
BstSFI	CTRYAG	3 cut(s)	462, 1277, 2289
BstSLI	GKGCMC	1 cut(s)	1745
BstUI	CGCG	2 cut(s)	338, 1353
BstV1I	GCAGC	8 cut(s)	448, 476, 655, 1291, 1305, 1558, 2077, 2081
BstV2I	GAAGAC	5 cut(s)	552, 1055, 1098, 1713, 1927
BstX2I	RGATCY	4 cut(s)	144, 692, 1691, 1797
BstYI	RGATCY	4 cut(s)	144, 692, 1691, 1797
BsuRI	GGCC	3 cut(s)	5, 1286, 1743
BtgI	CCRYGG	2 cut(s)	1218, 2190
BtsCI	GGATG	7 cut(s)	280, 295, 385, 1621, 1708, 1718, 2300
BtsIMutI	CAGTG	2 cut(s)	121, 1674
BveI	ACCTGC	1 cut(s)	214
Cac8I	GCNNGC	7 cut(s)	507, 535, 1284, 1425, 1821, 2149, 2275
CaiI	CAGNNNCTG	2 cut(s)	250, 709
CfoI	GCGC	3 cut(s)	134, 1353, 2102
Cfr10I	RCCGGY	1 cut(s)	2296
Cfr13I	GGNCC	4 cut(s)	1741, 1742, 1861, 2294
CseI	GACGC	2 cut(s)	186, 817
Csp6I	GTAC	3 cut(s)	108, 1592, 2181
CspCI	CAANNNNNGTGG	4 cut(s)	2172, 2207, 2211, 2246
CviAII	CATG	4 cut(s)	929, 1219, 1589, 1738
CviQI	GTAC	3 cut(s)	108, 1592, 2181
DpnI	GATC	6 cut(s)	146, 694, 1356, 1693, 1799, 1983
DpnII	GATC	6 cut(s)	144, 692, 1354, 1691, 1797, 1981
DraI	TTTAAA	1 cut(s)	1413
DriI	GACNNNNNGTC	1 cut(s)	172
Eam1104I	CTCTTC	6 cut(s)	121, 612, 819, 888, 1094, 1956
Eam1105I	GACNNNNNGTC	1 cut(s)	172
EarI	CTCTTC	6 cut(s)	121, 612, 819, 888, 1094, 1956
Ecl136II	GAGCTC	2 cut(s)	1672, 1819
Eco130I	CCWWGG	1 cut(s)	1218
Eco24I	GRGCYC	4 cut(s)	1674, 1745, 1821, 1882
Eco31I	GGTCTC	1 cut(s)	567
Eco47I	GGWCC	2 cut(s)	1861, 2294
Eco53kI	GAGCTC	2 cut(s)	1672, 1819
Eco57I	CTGAAG	7 cut(s)	521, 542, 681, 1346, 1538, 1925, 2090
Eco88I	CYCGRG	2 cut(s)	299, 2063
EcoICRI	GAGCTC	2 cut(s)	1672, 1819
EcoO109I	RGGNCCY	2 cut(s)	1742, 1861
EcoRII	CCWGG	4 cut(s)	219, 318, 399, 576
EcoT14I	CCWWGG	1 cut(s)	1218
EcoT22I	ATGCAT	1 cut(s)	1720
EcoT38I	GRGCYC	4 cut(s)	1674, 1745, 1821, 1882
ErhI	CCWWGG	1 cut(s)	1218
FaeI	CATG	4 cut(s)	932, 1222, 1592, 1741
FalI	AAGNNNNNCTT	2 cut(s)	118, 150
FaqI	GGGAC	1 cut(s)	1847
FatI	CATG	4 cut(s)	928, 1218, 1588, 1737
FauI	CCCGC	3 cut(s)	29, 438, 498
FokI	GGATG	7 cut(s)	267, 302, 392, 1628, 1705, 1715, 2287
FriOI	GRGCYC	4 cut(s)	1674, 1745, 1821, 1882
GlaI	GCGC	3 cut(s)	133, 1352, 2101
GsuI	CTGGAG	4 cut(s)	341, 422, 458, 1787
HaeII	RGCGCY	1 cut(s)	135
HaeIII	GGCC	3 cut(s)	5, 1286, 1743
HapII	CCGG	2 cut(s)	763, 2297
HgaI	GACGC	2 cut(s)	186, 817
HhaI	GCGC	3 cut(s)	134, 1353, 2102
Hin1II	CATG	4 cut(s)	932, 1222, 1592, 1741
Hin6I	GCGC	3 cut(s)	132, 1351, 2100
HinP1I	GCGC	3 cut(s)	132, 1351, 2100
HincII	GTYRAC	1 cut(s)	1498
HindII	GTYRAC	1 cut(s)	1498
HindIII	AAGCTT	4 cut(s)	554, 1169, 1484, 2054
HinfI	GANTC	7 cut(s)	78, 214, 680, 751, 759, 976, 1373
HpaII	CCGG	2 cut(s)	763, 2297
HphI	GGTGA	2 cut(s)	982, 2183
Hpy166II	GTNNAC	3 cut(s)	108, 1498, 1594
Hpy188III	TCNNGA	9 cut(s)	311, 515, 566, 733, 763, 924, 1035, 1067, 2009
Hpy8I	GTNNAC	3 cut(s)	108, 1498, 1594
HpyAV	CCTTC	3 cut(s)	341, 355, 1219
HpyCH4III	ACNGT	1 cut(s)	1651
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 344, 347, 442, 530, 938, 1522, 2099, 2297
Hsp92II	CATG	4 cut(s)	932, 1222, 1592, 1741
HspAI	GCGC	3 cut(s)	132, 1351, 2100
Kpn2I	TCCGGA	1 cut(s)	762
Kzo9I	GATC	6 cut(s)	144, 692, 1354, 1691, 1797, 1981
LguI	GCTCTTC	1 cut(s)	888
LmnI	GCTCC	8 cut(s)	29, 194, 403, 439, 1198, 1228, 1543, 1900
Lsp1109I	GCAGC	8 cut(s)	448, 476, 655, 1291, 1305, 1558, 2077, 2081
LweI	GCATC	8 cut(s)	370, 655, 1126, 1512, 1727, 1832, 1877, 1963
MaeIII	GTNAC	3 cut(s)	326, 2218, 2284
MalI	GATC	6 cut(s)	146, 694, 1356, 1693, 1799, 1983
MbiI	CCGCTC	2 cut(s)	24, 442
MboI	GATC	6 cut(s)	144, 692, 1354, 1691, 1797, 1981
MfeI	CAATTG	2 cut(s)	1076, 2075
MflI	RGATCY	4 cut(s)	144, 692, 1691, 1797
MhlI	GDGCHC	5 cut(s)	408, 1674, 1745, 1821, 1882
MlyI	GAGTC	4 cut(s)	87, 674, 753, 1382
MmeI	TCCRAC	3 cut(s)	774, 1356, 1593
Mph1103I	ATGCAT	1 cut(s)	1720
MroI	TCCGGA	1 cut(s)	762
MseI	TTAA	6 cut(s)	161, 900, 1121, 1368, 1412, 1841
MslI	CAYNNNNRTG	1 cut(s)	989
MspCI	CTTAAG	2 cut(s)	899, 1840
MspI	CCGG	2 cut(s)	763, 2297
MspR9I	CCNGG	4 cut(s)	221, 320, 401, 578
MunI	CAATTG	2 cut(s)	1076, 2075
MvaI	CCWGG	4 cut(s)	221, 320, 401, 578
MvnI	CGCG	2 cut(s)	338, 1353
MwoI	GCNNNNNNNGC	9 cut(s)	11, 344, 347, 442, 530, 938, 1522, 2099, 2297
NcoI	CCATGG	1 cut(s)	1218
NdeII	GATC	6 cut(s)	144, 692, 1354, 1691, 1797, 1981
NheI	GCTAGC	1 cut(s)	2147
NlaIII	CATG	4 cut(s)	932, 1222, 1592, 1741
NlaIV	GGNNCC	1 cut(s)	1743
NmuCI	GTSAC	2 cut(s)	326, 2218
NsiI	ATGCAT	1 cut(s)	1720
NspI	RCATGY	2 cut(s)	932, 1592
PaeR7I	CTCGAG	1 cut(s)	2063
PciI	ACATGT	1 cut(s)	1588
PciSI	GCTCTTC	1 cut(s)	888
PfeI	GAWTC	3 cut(s)	214, 751, 976
PflMI	CCANNNNNTGG	1 cut(s)	1765
PfoI	TCCNGGA	2 cut(s)	219, 399
PleI	GAGTC	4 cut(s)	86, 674, 753, 1381
PpsI	GAGTC	4 cut(s)	86, 674, 753, 1381
PpuMI	RGGWCCY	1 cut(s)	1861
PscI	ACATGT	1 cut(s)	1588
Psp124BI	GAGCTC	2 cut(s)	1674, 1821
Psp5II	RGGWCCY	1 cut(s)	1861
Psp6I	CCWGG	4 cut(s)	219, 318, 399, 576
PspGI	CCWGG	4 cut(s)	219, 318, 399, 576
PspN4I	GGNNCC	1 cut(s)	1743
PspOMI	GGGCCC	1 cut(s)	1741
PspPI	GGNCC	4 cut(s)	1741, 1742, 1861, 2294
PspPPI	RGGWCCY	1 cut(s)	1861
PspXI	VCTCGAGB	1 cut(s)	2063
PstI	CTGCAG	3 cut(s)	466, 1281, 2293
PstNI	CAGNNNCTG	2 cut(s)	250, 709
PsuI	RGATCY	4 cut(s)	144, 692, 1691, 1797
RsaI	GTAC	3 cut(s)	109, 1593, 2182
RsaNI	GTAC	3 cut(s)	108, 1592, 2181
RseI	CAYNNNNRTG	1 cut(s)	989
SacI	GAGCTC	2 cut(s)	1674, 1821
SapI	GCTCTTC	1 cut(s)	888
SaqAI	TTAA	6 cut(s)	161, 900, 1121, 1368, 1412, 1841
Sau3AI	GATC	6 cut(s)	144, 692, 1354, 1691, 1797, 1981
Sau96I	GGNCC	4 cut(s)	1741, 1742, 1861, 2294
SchI	GAGTC	4 cut(s)	87, 674, 753, 1382
ScrFI	CCNGG	4 cut(s)	221, 320, 401, 578
SduI	GDGCHC	5 cut(s)	408, 1674, 1745, 1821, 1882
SfaNI	GCATC	8 cut(s)	370, 655, 1126, 1512, 1727, 1832, 1877, 1963
SfcI	CTRYAG	3 cut(s)	462, 1277, 2289
Sfr274I	CTCGAG	1 cut(s)	2063
SinI	GGWCC	2 cut(s)	1861, 2294
SlaI	CTCGAG	1 cut(s)	2063
SmiMI	CAYNNNNRTG	1 cut(s)	989
SmlI	CTYRAG	8 cut(s)	139, 528, 899, 1202, 1487, 1571, 1840, 2063
SmoI	CTYRAG	8 cut(s)	139, 528, 899, 1202, 1487, 1571, 1840, 2063
SpeI	ACTAGT	1 cut(s)	1532
SstI	GAGCTC	2 cut(s)	1674, 1821
StyD4I	CCNGG	4 cut(s)	219, 318, 399, 576
StyI	CCWWGG	1 cut(s)	1218
TaaI	ACNGT	1 cut(s)	1651
TaqI	TCGA	4 cut(s)	176, 1398, 1809, 2064
TatI	WGTACW	3 cut(s)	107, 1591, 2180
TauI	GCSGC	6 cut(s)	17, 38, 341, 350, 445, 590
TfiI	GAWTC	3 cut(s)	214, 751, 976
Tru1I	TTAA	6 cut(s)	161, 900, 1121, 1368, 1412, 1841
Tru9I	TTAA	6 cut(s)	161, 900, 1121, 1368, 1412, 1841
TscAI	CASTG	2 cut(s)	121, 1681
TseFI	GTSAC	2 cut(s)	326, 2218
TseI	GCWGC	8 cut(s)	461, 464, 668, 1279, 1318, 1546, 2069, 2090
Tsp45I	GTSAC	2 cut(s)	326, 2218
TspGWI	ACGGA	2 cut(s)	1675, 2179
TspRI	CASTG	2 cut(s)	121, 1681
Van91I	CCANNNNNTGG	1 cut(s)	1765
Vha464I	CTTAAG	2 cut(s)	899, 1840
VpaK11BI	GGWCC	2 cut(s)	1861, 2294
XapI	RAATTY	5 cut(s)	271, 1337, 1401, 1631, 1784
XbaI	TCTAGA	2 cut(s)	923, 1034
XceI	RCATGY	2 cut(s)	932, 1592
XhoI	CTCGAG	1 cut(s)	2063
Zsp2I	ATGCAT	1 cut(s)	1720

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.