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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G32190 |
| fragaria_vesca | FvH4_2g28941 FvH4_2g28941 FvH4_2g28941 |
| malus_domestica | MD15G1126300.v1.1 |
| prunus_persica | Prupe.1G482200_v2.0.a1 Prupe.1G482200_v2.0.a1 Prupe.1G482200_v2.0.a1 Prupe.1G482200_v2.0.a1 Prupe.1G482200_v2.0.a1 |
| pyrus_communis | pycom15g11400 |
| rosa_chinensis | RchiOBHm_Chr6g0297771 |
| rosa_laevigata | RLG00000011563 |
| rosa_multiflora | Rmu_sc0002674.1_g000011 Rmu_sc0002674.1_g000014 |
| rosa_roxburghii | Rroxscaffold_7G00170210 Rroxscaffold_7G00179060 |
| rosa_rugosa | Rorug06G0275400 Rorug06G0275400 |
| rosa_samantha | Rh6AG385900 Rh6BG394500 Rh6CG400200 Rh6DG386700 |
| rosa_wichuraiana | Rw6G033640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 237, 1352 |
| Acc36I | ACCTGC | 1 cut(s) | 214 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1765 |
| AccBSI | CCGCTC | 2 cut(s) | 24, 442 |
| AccII | CGCG | 2 cut(s) | 134, 338 |
| AccIII | TCCGGA | 1 cut(s) | 762 |
| AclWI | GGATC | 1 cut(s) | 152 |
| AcsI | RAATTY | 5 cut(s) | 271, 1337, 1401, 1631, 1784 |
| AcuI | CTGAAG | 5 cut(s) | 521, 542, 1538, 1925, 2090 |
| AfaI | GTAC | 3 cut(s) | 109, 1593, 2182 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 337, 427, 1765 |
| AflII | CTTAAG | 2 cut(s) | 899, 1840 |
| AflIII | ACRYGT | 1 cut(s) | 1588 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 172 |
| AhlI | ACTAGT | 2 cut(s) | 113, 1532 |
| AjnI | CCWGG | 4 cut(s) | 219, 318, 399, 576 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 935, 967, 986, 1018, 1949, 1981 |
| Alw21I | GWGCWC | 3 cut(s) | 408, 1674, 1882 |
| Alw26I | GTCTC | 3 cut(s) | 567, 730, 847 |
| AlwI | GGATC | 1 cut(s) | 152 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 250, 709 |
| Ama87I | CYCGRG | 2 cut(s) | 299, 2063 |
| Aor13HI | TCCGGA | 1 cut(s) | 762 |
| AoxI | GGCC | 3 cut(s) | 3, 1284, 1741 |
| ApoI | RAATTY | 5 cut(s) | 271, 1337, 1401, 1631, 1784 |
| AspLEI | GCGC | 4 cut(s) | 134, 238, 1353, 2102 |
| AspS9I | GGNCC | 3 cut(s) | 1741, 1861, 2294 |
| AsuHPI | GGTGA | 2 cut(s) | 982, 2183 |
| AsuNHI | GCTAGC | 1 cut(s) | 2147 |
| AvaI | CYCGRG | 2 cut(s) | 299, 2063 |
| AvaII | GGWCC | 2 cut(s) | 1861, 2294 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2247, 2280 |
| BanII | GRGCYC | 2 cut(s) | 1674, 1882 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1575, 1607 |
| BbsI | GAAGAC | 6 cut(s) | 552, 1055, 1098, 1526, 1713, 1927 |
| Bbv12I | GWGCWC | 3 cut(s) | 408, 1674, 1882 |
| BccI | CCATC | 3 cut(s) | 1295, 1903, 2162 |
| BciT130I | CCWGG | 4 cut(s) | 221, 320, 401, 578 |
| BcoDI | GTCTC | 3 cut(s) | 567, 730, 847 |
| BcuI | ACTAGT | 2 cut(s) | 113, 1532 |
| BfmI | CTRYAG | 3 cut(s) | 462, 1277, 2289 |
| BfrI | CTTAAG | 2 cut(s) | 899, 1840 |
| BfuAI | ACCTGC | 1 cut(s) | 214 |
| BglII | AGATCT | 3 cut(s) | 692, 1691, 1797 |
| Bme1390I | CCNGG | 4 cut(s) | 221, 320, 401, 578 |
| Bme18I | GGWCC | 2 cut(s) | 1861, 2294 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 172 |
| BmeT110I | CYCGRG | 2 cut(s) | 299, 2063 |
| BmgT120I | GGNCC | 3 cut(s) | 1741, 1861, 2294 |
| BmiI | GGNNCC | 1 cut(s) | 2296 |
| BmrFI | CCNGG | 4 cut(s) | 221, 320, 401, 578 |
| BmsI | GCATC | 7 cut(s) | 370, 655, 1126, 1259, 1727, 1877, 1963 |
| BmtI | GCTAGC | 1 cut(s) | 2151 |
| BpiI | GAAGAC | 6 cut(s) | 552, 1055, 1098, 1526, 1713, 1927 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1256, 1288, 1258, 1290 |
| BpmI | CTGGAG | 4 cut(s) | 341, 422, 458, 1787 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1172, 2153 |
| BpuEI | CTTGAG | 4 cut(s) | 513, 1223, 1508, 1556 |
| BsaI | GGTCTC | 1 cut(s) | 567 |
| BsaJI | CCNNGG | 3 cut(s) | 318, 1218, 2190 |
| BsaWI | WCCGGW | 1 cut(s) | 762 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 163, 193 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 337, 427, 1765 |
| Bse1I | ACTGG | 4 cut(s) | 396, 1681, 1770, 2178 |
| Bse3DI | GCAATG | 1 cut(s) | 196 |
| BseAI | TCCGGA | 1 cut(s) | 762 |
| BseBI | CCWGG | 4 cut(s) | 221, 320, 401, 578 |
| BseDI | CCNNGG | 3 cut(s) | 318, 1218, 2190 |
| BseGI | GGATG | 8 cut(s) | 280, 295, 331, 385, 646, 1621, 1708, 1718 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 337, 427, 1765 |
| BseMI | GCAATG | 1 cut(s) | 196 |
| BseMII | CTCAG | 8 cut(s) | 716, 818, 990, 1410, 1806, 1886, 1976, 2144 |
| BseNI | ACTGG | 4 cut(s) | 396, 1681, 1770, 2178 |
| BseRI | GAGGAG | 4 cut(s) | 842, 1262, 1556, 1913 |
| BsgI | GTGCAG | 2 cut(s) | 1304, 1739 |
| Bsh1236I | CGCG | 2 cut(s) | 134, 338 |
| BshFI | GGCC | 3 cut(s) | 5, 1286, 1743 |
| BsiHKAI | GWGCWC | 3 cut(s) | 408, 1674, 1882 |
| BsiHKCI | CYCGRG | 2 cut(s) | 299, 2063 |
| BsiSI | CCGG | 1 cut(s) | 763 |
| BslFI | GGGAC | 1 cut(s) | 1847 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 337, 427, 1765 |
| BsmAI | GTCTC | 3 cut(s) | 567, 730, 847 |
| BsmFI | GGGAC | 1 cut(s) | 1847 |
| BsnI | GGCC | 3 cut(s) | 5, 1286, 1743 |
| Bso31I | GGTCTC | 1 cut(s) | 567 |
| BsoBI | CYCGRG | 2 cut(s) | 299, 2063 |
| Bsp1286I | GDGCHC | 3 cut(s) | 408, 1674, 1882 |
| Bsp13I | TCCGGA | 1 cut(s) | 762 |
| Bsp1407I | TGTACA | 2 cut(s) | 107, 1591 |
| Bsp143I | GATC | 6 cut(s) | 144, 692, 1072, 1691, 1797, 1981 |
| Bsp19I | CCATGG | 1 cut(s) | 1218 |
| BspANI | GGCC | 3 cut(s) | 5, 1286, 1743 |
| BspCNI | CTCAG | 8 cut(s) | 715, 817, 991, 1411, 1807, 1885, 1977, 2145 |
| BspEI | TCCGGA | 1 cut(s) | 762 |
| BspFNI | CGCG | 2 cut(s) | 134, 338 |
| BspLI | GGNNCC | 1 cut(s) | 2296 |
| BspMAI | CTGCAG | 3 cut(s) | 466, 1281, 2293 |
| BspMI | ACCTGC | 1 cut(s) | 214 |
| BspOI | GCTAGC | 1 cut(s) | 2151 |
| BspPI | GGATC | 1 cut(s) | 152 |
| BspQI | GCTCTTC | 1 cut(s) | 888 |
| BspTI | CTTAAG | 2 cut(s) | 899, 1840 |
| BspTNI | GGTCTC | 1 cut(s) | 567 |
| BsrBI | CCGCTC | 2 cut(s) | 24, 442 |
| BsrDI | GCAATG | 1 cut(s) | 196 |
| BsrGI | TGTACA | 2 cut(s) | 107, 1591 |
| BsrI | ACTGG | 4 cut(s) | 396, 1681, 1770, 2178 |
| BssECI | CCNNGG | 3 cut(s) | 318, 1218, 2190 |
| BssMI | GATC | 6 cut(s) | 144, 692, 1072, 1691, 1797, 1981 |
| BssT1I | CCWWGG | 1 cut(s) | 1218 |
| Bst2UI | CCWGG | 4 cut(s) | 221, 320, 401, 578 |
| Bst4CI | ACNGT | 2 cut(s) | 597, 1651 |
| Bst6I | CTCTTC | 8 cut(s) | 49, 121, 612, 783, 819, 888, 1094, 1956 |
| BstAFI | CTTAAG | 2 cut(s) | 899, 1840 |
| BstAUI | TGTACA | 2 cut(s) | 107, 1591 |
| BstC8I | GCNNGC | 7 cut(s) | 507, 535, 1284, 1425, 2149, 2275, 2302 |
| BstDSI | CCRYGG | 2 cut(s) | 1218, 2190 |
| BstF5I | GGATG | 8 cut(s) | 280, 295, 331, 385, 646, 1621, 1708, 1718 |
| BstFNI | CGCG | 2 cut(s) | 134, 338 |
| BstHHI | GCGC | 4 cut(s) | 134, 238, 1353, 2102 |
| BstKTI | GATC | 6 cut(s) | 147, 695, 1075, 1694, 1800, 1984 |
| BstMAI | GTCTC | 3 cut(s) | 567, 730, 847 |
| BstMBI | GATC | 6 cut(s) | 144, 692, 1072, 1691, 1797, 1981 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 11, 344, 347, 442, 530, 938, 1522, 2099, 2297 |
| BstNI | CCWGG | 4 cut(s) | 221, 320, 401, 578 |
| BstNSI | RCATGY | 2 cut(s) | 1592, 2304 |
| BstSCI | CCNGG | 4 cut(s) | 219, 318, 399, 576 |
| BstSFI | CTRYAG | 3 cut(s) | 462, 1277, 2289 |
| BstUI | CGCG | 2 cut(s) | 134, 338 |
| BstV2I | GAAGAC | 6 cut(s) | 552, 1055, 1098, 1526, 1713, 1927 |
| BstX2I | RGATCY | 4 cut(s) | 144, 692, 1691, 1797 |
| BstYI | RGATCY | 4 cut(s) | 144, 692, 1691, 1797 |
| BsuRI | GGCC | 3 cut(s) | 5, 1286, 1743 |
| BtgI | CCRYGG | 2 cut(s) | 1218, 2190 |
| BtsCI | GGATG | 8 cut(s) | 280, 295, 331, 385, 646, 1621, 1708, 1718 |
| BtsI | GCAGTG | 1 cut(s) | 2124 |
| BtsIMutI | CAGTG | 2 cut(s) | 1674, 2124 |
| BveI | ACCTGC | 1 cut(s) | 214 |
| Cac8I | GCNNGC | 7 cut(s) | 507, 535, 1284, 1425, 2149, 2275, 2302 |
| CaiI | CAGNNNCTG | 2 cut(s) | 250, 709 |
| CfoI | GCGC | 4 cut(s) | 134, 238, 1353, 2102 |
| Cfr13I | GGNCC | 3 cut(s) | 1741, 1861, 2294 |
| CseI | GACGC | 4 cut(s) | 123, 186, 817, 1531 |
| Csp6I | GTAC | 3 cut(s) | 108, 1592, 2181 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2172, 2207, 2211, 2246 |
| CviAII | CATG | 5 cut(s) | 1219, 1589, 1738, 1745, 2301 |
| CviQI | GTAC | 3 cut(s) | 108, 1592, 2181 |
| DpnI | GATC | 6 cut(s) | 146, 694, 1074, 1693, 1799, 1983 |
| DpnII | GATC | 6 cut(s) | 144, 692, 1072, 1691, 1797, 1981 |
| DraI | TTTAAA | 1 cut(s) | 1413 |
| DriI | GACNNNNNGTC | 1 cut(s) | 172 |
| Eam1104I | CTCTTC | 8 cut(s) | 49, 121, 612, 783, 819, 888, 1094, 1956 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 172 |
| EarI | CTCTTC | 8 cut(s) | 49, 121, 612, 783, 819, 888, 1094, 1956 |
| Ecl136II | GAGCTC | 2 cut(s) | 1672, 1880 |
| Eco130I | CCWWGG | 1 cut(s) | 1218 |
| Eco24I | GRGCYC | 2 cut(s) | 1674, 1882 |
| Eco31I | GGTCTC | 1 cut(s) | 567 |
| Eco47I | GGWCC | 2 cut(s) | 1861, 2294 |
| Eco53kI | GAGCTC | 2 cut(s) | 1672, 1880 |
| Eco57I | CTGAAG | 5 cut(s) | 521, 542, 1538, 1925, 2090 |
| Eco88I | CYCGRG | 2 cut(s) | 299, 2063 |
| EcoICRI | GAGCTC | 2 cut(s) | 1672, 1880 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1861, 2294 |
| EcoRII | CCWGG | 4 cut(s) | 219, 318, 399, 576 |
| EcoT14I | CCWWGG | 1 cut(s) | 1218 |
| EcoT22I | ATGCAT | 1 cut(s) | 1720 |
| EcoT38I | GRGCYC | 2 cut(s) | 1674, 1882 |
| ErhI | CCWWGG | 1 cut(s) | 1218 |
| FaeI | CATG | 5 cut(s) | 1222, 1592, 1741, 1748, 2304 |
| FaqI | GGGAC | 1 cut(s) | 1847 |
| FatI | CATG | 5 cut(s) | 1218, 1588, 1737, 1744, 2300 |
| FauI | CCCGC | 4 cut(s) | 29, 438, 498, 2305 |
| FokI | GGATG | 8 cut(s) | 267, 302, 338, 392, 653, 1628, 1705, 1715 |
| FriOI | GRGCYC | 2 cut(s) | 1674, 1882 |
| FspI | TGCGCA | 2 cut(s) | 237, 1352 |
| GlaI | GCGC | 4 cut(s) | 133, 237, 1352, 2101 |
| GsuI | CTGGAG | 4 cut(s) | 341, 422, 458, 1787 |
| HaeIII | GGCC | 3 cut(s) | 5, 1286, 1743 |
| HapII | CCGG | 1 cut(s) | 763 |
| HgaI | GACGC | 4 cut(s) | 123, 186, 817, 1531 |
| HhaI | GCGC | 4 cut(s) | 134, 238, 1353, 2102 |
| Hin1II | CATG | 5 cut(s) | 1222, 1592, 1741, 1748, 2304 |
| Hin6I | GCGC | 4 cut(s) | 132, 236, 1351, 2100 |
| HinP1I | GCGC | 4 cut(s) | 132, 236, 1351, 2100 |
| HincII | GTYRAC | 1 cut(s) | 1498 |
| HindII | GTYRAC | 1 cut(s) | 1498 |
| HindIII | AAGCTT | 3 cut(s) | 554, 1169, 2054 |
| HinfI | GANTC | 8 cut(s) | 78, 214, 680, 751, 759, 976, 1373, 1823 |
| HpaII | CCGG | 1 cut(s) | 763 |
| HphI | GGTGA | 2 cut(s) | 982, 2183 |
| Hpy166II | GTNNAC | 3 cut(s) | 108, 1498, 1594 |
| Hpy188III | TCNNGA | 9 cut(s) | 311, 515, 566, 733, 763, 924, 1035, 1067, 2009 |
| Hpy8I | GTNNAC | 3 cut(s) | 108, 1498, 1594 |
| Hpy99I | CGWCG | 1 cut(s) | 959 |
| HpyAV | CCTTC | 4 cut(s) | 341, 355, 960, 1219 |
| HpyCH4III | ACNGT | 2 cut(s) | 597, 1651 |
| HpyCH4IV | ACGT | 1 cut(s) | 549 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 11, 344, 347, 442, 530, 938, 1522, 2099, 2297 |
| HpySE526I | ACGT | 1 cut(s) | 549 |
| Hsp92II | CATG | 5 cut(s) | 1222, 1592, 1741, 1748, 2304 |
| HspAI | GCGC | 4 cut(s) | 132, 236, 1351, 2100 |
| Kpn2I | TCCGGA | 1 cut(s) | 762 |
| Kzo9I | GATC | 6 cut(s) | 144, 692, 1072, 1691, 1797, 1981 |
| LguI | GCTCTTC | 1 cut(s) | 888 |
| LmnI | GCTCC | 9 cut(s) | 29, 194, 403, 439, 1198, 1228, 1543, 1877, 1900 |
| LweI | GCATC | 7 cut(s) | 370, 655, 1126, 1259, 1727, 1877, 1963 |
| MaeII | ACGT | 1 cut(s) | 549 |
| MaeIII | GTNAC | 2 cut(s) | 2218, 2284 |
| MalI | GATC | 6 cut(s) | 146, 694, 1074, 1693, 1799, 1983 |
| MbiI | CCGCTC | 2 cut(s) | 24, 442 |
| MboI | GATC | 6 cut(s) | 144, 692, 1072, 1691, 1797, 1981 |
| MfeI | CAATTG | 2 cut(s) | 1076, 2075 |
| MflI | RGATCY | 4 cut(s) | 144, 692, 1691, 1797 |
| MhlI | GDGCHC | 3 cut(s) | 408, 1674, 1882 |
| MlyI | GAGTC | 4 cut(s) | 87, 674, 753, 1382 |
| MmeI | TCCRAC | 4 cut(s) | 774, 1356, 1593, 1947 |
| Mph1103I | ATGCAT | 1 cut(s) | 1720 |
| MroI | TCCGGA | 1 cut(s) | 762 |
| MseI | TTAA | 6 cut(s) | 161, 900, 1121, 1368, 1412, 1841 |
| MslI | CAYNNNNRTG | 1 cut(s) | 989 |
| MspA1I | CMGCKG | 1 cut(s) | 1562 |
| MspCI | CTTAAG | 2 cut(s) | 899, 1840 |
| MspI | CCGG | 1 cut(s) | 763 |
| MspR9I | CCNGG | 4 cut(s) | 221, 320, 401, 578 |
| MunI | CAATTG | 2 cut(s) | 1076, 2075 |
| MvaI | CCWGG | 4 cut(s) | 221, 320, 401, 578 |
| MvnI | CGCG | 2 cut(s) | 134, 338 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 11, 344, 347, 442, 530, 938, 1522, 2099, 2297 |
| NcoI | CCATGG | 1 cut(s) | 1218 |
| NdeII | GATC | 6 cut(s) | 144, 692, 1072, 1691, 1797, 1981 |
| NheI | GCTAGC | 1 cut(s) | 2147 |
| NlaIII | CATG | 5 cut(s) | 1222, 1592, 1741, 1748, 2304 |
| NlaIV | GGNNCC | 1 cut(s) | 2296 |
| NsbI | TGCGCA | 2 cut(s) | 237, 1352 |
| NsiI | ATGCAT | 1 cut(s) | 1720 |
| NspI | RCATGY | 2 cut(s) | 1592, 2304 |
| PaeI | GCATGC | 1 cut(s) | 2304 |
| PaeR7I | CTCGAG | 1 cut(s) | 2063 |
| PciI | ACATGT | 1 cut(s) | 1588 |
| PciSI | GCTCTTC | 1 cut(s) | 888 |
| PfeI | GAWTC | 4 cut(s) | 214, 751, 976, 1823 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1765 |
| PfoI | TCCNGGA | 2 cut(s) | 219, 399 |
| PleI | GAGTC | 4 cut(s) | 86, 674, 753, 1381 |
| PpsI | GAGTC | 4 cut(s) | 86, 674, 753, 1381 |
| PpuMI | RGGWCCY | 2 cut(s) | 1861, 2294 |
| PscI | ACATGT | 1 cut(s) | 1588 |
| Psp124BI | GAGCTC | 2 cut(s) | 1674, 1882 |
| Psp5II | RGGWCCY | 2 cut(s) | 1861, 2294 |
| Psp6I | CCWGG | 4 cut(s) | 219, 318, 399, 576 |
| PspGI | CCWGG | 4 cut(s) | 219, 318, 399, 576 |
| PspN4I | GGNNCC | 1 cut(s) | 2296 |
| PspPI | GGNCC | 3 cut(s) | 1741, 1861, 2294 |
| PspPPI | RGGWCCY | 2 cut(s) | 1861, 2294 |
| PspXI | VCTCGAGB | 1 cut(s) | 2063 |
| PstI | CTGCAG | 3 cut(s) | 466, 1281, 2293 |
| PstNI | CAGNNNCTG | 2 cut(s) | 250, 709 |
| PsuI | RGATCY | 4 cut(s) | 144, 692, 1691, 1797 |
| PvuII | CAGCTG | 1 cut(s) | 1562 |
| RsaI | GTAC | 3 cut(s) | 109, 1593, 2182 |
| RsaNI | GTAC | 3 cut(s) | 108, 1592, 2181 |
| RseI | CAYNNNNRTG | 1 cut(s) | 989 |
| SacI | GAGCTC | 2 cut(s) | 1674, 1882 |
| SapI | GCTCTTC | 1 cut(s) | 888 |
| SaqAI | TTAA | 6 cut(s) | 161, 900, 1121, 1368, 1412, 1841 |
| Sau3AI | GATC | 6 cut(s) | 144, 692, 1072, 1691, 1797, 1981 |
| Sau96I | GGNCC | 3 cut(s) | 1741, 1861, 2294 |
| SchI | GAGTC | 4 cut(s) | 87, 674, 753, 1382 |
| ScrFI | CCNGG | 4 cut(s) | 221, 320, 401, 578 |
| SduI | GDGCHC | 3 cut(s) | 408, 1674, 1882 |
| SfaNI | GCATC | 7 cut(s) | 370, 655, 1126, 1259, 1727, 1877, 1963 |
| SfcI | CTRYAG | 3 cut(s) | 462, 1277, 2289 |
| Sfr274I | CTCGAG | 1 cut(s) | 2063 |
| SinI | GGWCC | 2 cut(s) | 1861, 2294 |
| SlaI | CTCGAG | 1 cut(s) | 2063 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 989 |
| SmlI | CTYRAG | 7 cut(s) | 528, 899, 1202, 1487, 1571, 1840, 2063 |
| SmoI | CTYRAG | 7 cut(s) | 528, 899, 1202, 1487, 1571, 1840, 2063 |
| SpeI | ACTAGT | 2 cut(s) | 113, 1532 |
| SphI | GCATGC | 1 cut(s) | 2304 |
| SstI | GAGCTC | 2 cut(s) | 1674, 1882 |
| StyD4I | CCNGG | 4 cut(s) | 219, 318, 399, 576 |
| StyI | CCWWGG | 1 cut(s) | 1218 |
| TaaI | ACNGT | 2 cut(s) | 597, 1651 |
| TaiI | ACGT | 1 cut(s) | 552 |
| TaqI | TCGA | 6 cut(s) | 176, 565, 954, 1398, 1809, 2064 |
| TatI | WGTACW | 3 cut(s) | 107, 1591, 2180 |
| TauI | GCSGC | 6 cut(s) | 17, 38, 341, 350, 445, 590 |
| TfiI | GAWTC | 4 cut(s) | 214, 751, 976, 1823 |
| Tru1I | TTAA | 6 cut(s) | 161, 900, 1121, 1368, 1412, 1841 |
| Tru9I | TTAA | 6 cut(s) | 161, 900, 1121, 1368, 1412, 1841 |
| TscAI | CASTG | 2 cut(s) | 1681, 2124 |
| TspDTI | ATGAA | 9 cut(s) | 657, 729, 738, 960, 1518, 1719, 1797, 1904, 1970 |
| TspGWI | ACGGA | 1 cut(s) | 2179 |
| TspRI | CASTG | 2 cut(s) | 1681, 2124 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1765 |
| Vha464I | CTTAAG | 2 cut(s) | 899, 1840 |
| VpaK11BI | GGWCC | 2 cut(s) | 1861, 2294 |
| XapI | RAATTY | 5 cut(s) | 271, 1337, 1401, 1631, 1784 |
| XbaI | TCTAGA | 2 cut(s) | 923, 1034 |
| XceI | RCATGY | 2 cut(s) | 1592, 2304 |
| XhoI | CTCGAG | 1 cut(s) | 2063 |
| Zsp2I | ATGCAT | 1 cut(s) | 1720 |